RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 AFF2P51816 1311 aa19.03■□□□□ 0.64
CHD2-218ENST00000629346 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.63
CHD2-218ENST00000629346 NUTM2DQ5VT03 806 aaPredicted RBP19.01■□□□□ 0.63
CHD2-218ENST00000629346 KANK1Q14678 1352 aa19.01■□□□□ 0.63
CHD2-218ENST00000629346 KIF15Q9NS87 1388 aa19.01■□□□□ 0.63
CHD2-218ENST00000629346 KDM5AP29375 1690 aaKnown RBP19.01■□□□□ 0.63
CHD2-218ENST00000629346 SHPRHQ149N8 1683 aa18.99■□□□□ 0.63
CHD2-218ENST00000629346 ATF3P18847 181 aa18.99■□□□□ 0.63
CHD2-218ENST00000629346 PPP1R15AO75807 674 aaPredicted RBP18.98■□□□□ 0.63
CHD2-218ENST00000629346 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
CHD2-218ENST00000629346 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
CHD2-218ENST00000629346 QTRT2Q9H974 415 aaKnown RBP18.97■□□□□ 0.63
CHD2-218ENST00000629346 CHD2O14647 1828 aaKnown RBP18.96■□□□□ 0.63
CHD2-218ENST00000629346 RGS12O14924 1447 aa18.96■□□□□ 0.63
CHD2-218ENST00000629346 ADGRB3O60242 1522 aa18.95■□□□□ 0.62
CHD2-218ENST00000629346 ERBINQ96RT1 1412 aa18.95■□□□□ 0.62
CHD2-218ENST00000629346 RBM6P78332 1123 aaKnown RBP18.95■□□□□ 0.62
CHD2-218ENST00000629346 C8orf37Q96NL8 207 aa18.95■□□□□ 0.62
CHD2-218ENST00000629346 C19orf44Q9H6X5 657 aa18.95■□□□□ 0.62
CHD2-218ENST00000629346 MYOM3Q5VTT5 1437 aa18.94■□□□□ 0.62
CHD2-218ENST00000629346 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
CHD2-218ENST00000629346 PLEKHG1Q9ULL1 1385 aa18.93■□□□□ 0.62
CHD2-218ENST00000629346 NCOA3Q9Y6Q9 1424 aa18.92■□□□□ 0.62
CHD2-218ENST00000629346 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.92■□□□□ 0.62
CHD2-218ENST00000629346 SLC52A1Q9NWF4 448 aa18.92■□□□□ 0.62
CHD2-218ENST00000629346 ZRANB1Q9UGI0 708 aa18.92■□□□□ 0.62
CHD2-218ENST00000629346 DIP2AQ14689 1571 aa18.91■□□□□ 0.62
CHD2-218ENST00000629346 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
CHD2-218ENST00000629346 NOS1P29475 1434 aa18.91■□□□□ 0.62
CHD2-218ENST00000629346 HDGFP51858 240 aaKnown RBP18.9■□□□□ 0.62
CHD2-218ENST00000629346 RIMS2Q9UQ26 1411 aa18.9■□□□□ 0.62
CHD2-218ENST00000629346 KANK4Q5T7N3 995 aaPredicted RBP18.89■□□□□ 0.61
CHD2-218ENST00000629346 ZFYVE9O95405 1425 aa18.89■□□□□ 0.61
CHD2-218ENST00000629346 ABCC5O15440 1437 aa18.88■□□□□ 0.61
CHD2-218ENST00000629346 LMTK2Q8IWU2 1503 aa18.88■□□□□ 0.61
CHD2-218ENST00000629346 CHGAP10645 457 aaKnown RBP18.87■□□□□ 0.61
CHD2-218ENST00000629346 CHIC2Q9UKJ5 165 aa18.87■□□□□ 0.61
CHD2-218ENST00000629346 ATAD2Q6PL18 1390 aa18.86■□□□□ 0.61
CHD2-218ENST00000629346 FOXD1Q16676 465 aa18.86■□□□□ 0.61
CHD2-218ENST00000629346 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
CHD2-218ENST00000629346 NGLY1Q96IV0 654 aa18.86■□□□□ 0.61
CHD2-218ENST00000629346 ADAMTS2O95450 1211 aa18.85■□□□□ 0.61
CHD2-218ENST00000629346 DDX17Q92841 729 aaKnown RBP18.85■□□□□ 0.61
CHD2-218ENST00000629346 SETBP1Q9Y6X0 1596 aa18.85■□□□□ 0.61
CHD2-218ENST00000629346 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
CHD2-218ENST00000629346 SETD5Q9C0A6 1442 aa18.83■□□□□ 0.61
CHD2-218ENST00000629346 AMOTL2Q9Y2J4 779 aa18.83■□□□□ 0.6
CHD2-218ENST00000629346 ASXL1Q8IXJ9 1541 aa18.83■□□□□ 0.6
CHD2-218ENST00000629346 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHD2-218ENST00000629346 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
CHD2-218ENST00000629346 ADAMTS13Q76LX8 1427 aa18.82■□□□□ 0.6
CHD2-218ENST00000629346 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
CHD2-218ENST00000629346 DAPK1P53355 1430 aa18.8■□□□□ 0.6
CHD2-218ENST00000629346 PNPLA6Q8IY17 1366 aa18.8■□□□□ 0.6
CHD2-218ENST00000629346 ANKRD30AQ9BXX3 1397 aa18.79■□□□□ 0.6
CHD2-218ENST00000629346 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
CHD2-218ENST00000629346 USP21Q9UK80 565 aa18.78■□□□□ 0.6
CHD2-218ENST00000629346 PIK3R4Q99570 1358 aa18.78■□□□□ 0.6
CHD2-218ENST00000629346 MST1RQ04912 1400 aa18.76■□□□□ 0.59
CHD2-218ENST00000629346 PTPRUQ92729 1446 aa18.76■□□□□ 0.59
CHD2-218ENST00000629346 NHSL1Q5SYE7 1610 aa18.76■□□□□ 0.59
CHD2-218ENST00000629346 PTPN23Q9H3S7 1636 aa18.75■□□□□ 0.59
CHD2-218ENST00000629346 DCCP43146 1447 aa18.74■□□□□ 0.59
CHD2-218ENST00000629346 TRPC5Q9UL62 973 aaPredicted RBP18.74■□□□□ 0.59
CHD2-218ENST00000629346 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
CHD2-218ENST00000629346 TRPM2O94759 1503 aa18.73■□□□□ 0.59
CHD2-218ENST00000629346 VPS8Q8N3P4 1428 aa18.72■□□□□ 0.59
CHD2-218ENST00000629346 EP400Q96L91 3159 aa18.72■□□□□ 0.59
CHD2-218ENST00000629346 CCDC125Q86Z20 511 aa18.71■□□□□ 0.59
CHD2-218ENST00000629346 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
CHD2-218ENST00000629346 ATRNO75882 1429 aa18.66■□□□□ 0.58
CHD2-218ENST00000629346 UNC13BO14795 1591 aa18.64■□□□□ 0.58
CHD2-218ENST00000629346 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
CHD2-218ENST00000629346 ANKRD50Q9ULJ7 1429 aa18.63■□□□□ 0.57
CHD2-218ENST00000629346 DEFB132Q7Z7B7 95 aa18.62■□□□□ 0.57
CHD2-218ENST00000629346 ORAI2Q96SN7 254 aa18.62■□□□□ 0.57
CHD2-218ENST00000629346 METP08581 1390 aa18.62■□□□□ 0.57
CHD2-218ENST00000629346 ADGRL3Q9HAR2 1447 aa18.62■□□□□ 0.57
CHD2-218ENST00000629346 PTCH1Q13635 1447 aa18.61■□□□□ 0.57
CHD2-218ENST00000629346 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
CHD2-218ENST00000629346 SOS2Q07890 1332 aaPredicted RBP18.6■□□□□ 0.57
CHD2-218ENST00000629346 GJD4Q96KN9 370 aaPredicted RBP18.59■□□□□ 0.57
CHD2-218ENST00000629346 ADGRL2O95490 1459 aa18.58■□□□□ 0.56
CHD2-218ENST00000629346 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.56
CHD2-218ENST00000629346 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
CHD2-218ENST00000629346 NALCNQ8IZF0 1738 aa18.57■□□□□ 0.56
CHD2-218ENST00000629346 E9PCH4 1651 aa18.57■□□□□ 0.56
CHD2-218ENST00000629346 NRXN3Q9Y4C0 1643 aa18.57■□□□□ 0.56
CHD2-218ENST00000629346 APLP2Q06481 763 aa18.57■□□□□ 0.56
CHD2-218ENST00000629346 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
CHD2-218ENST00000629346 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
CHD2-218ENST00000629346 SF3B2Q13435 895 aaKnown RBP18.56■□□□□ 0.56
CHD2-218ENST00000629346 PSDA5PKW4 1024 aaPredicted RBP18.55■□□□□ 0.56
CHD2-218ENST00000629346 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
CHD2-218ENST00000629346 LRP5O75197 1615 aa18.52■□□□□ 0.55
CHD2-218ENST00000629346 LAMC1P11047 1609 aa18.52■□□□□ 0.55
CHD2-218ENST00000629346 COL22A1Q8NFW1 1626 aaPredicted RBP18.5■□□□□ 0.55
CHD2-218ENST00000629346 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
CHD2-218ENST00000629346 MYOM2P54296 1465 aa18.5■□□□□ 0.55
CHD2-218ENST00000629346 RALGAPBQ86X10 1494 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms