RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 NUDT18Q6ZVK8 323 aa4.49□□□□□ -1.69
SPTAN1-216ENST00000629047 PRSS12P56730 875 aa4.48□□□□□ -1.69
SPTAN1-216ENST00000629047 TMUB1Q9BVT8 246 aa4.48□□□□□ -1.69
SPTAN1-216ENST00000629047 GTPBP6O43824 516 aaPredicted RBP4.47□□□□□ -1.69
SPTAN1-216ENST00000629047 PKD2L1Q9P0L9 805 aa4.47□□□□□ -1.69
SPTAN1-216ENST00000629047 NBPF26B4DH59 902 aa4.46□□□□□ -1.7
SPTAN1-216ENST00000629047 C11orf95C9JLR9 678 aaPredicted RBP4.46□□□□□ -1.7
SPTAN1-216ENST00000629047 FOXC1Q12948 553 aa4.46□□□□□ -1.7
SPTAN1-216ENST00000629047 SNRPBP14678 240 aaKnown RBP4.45□□□□□ -1.7
SPTAN1-216ENST00000629047 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
SPTAN1-216ENST00000629047 INSM1Q01101 510 aaPredicted RBP4.45□□□□□ -1.7
SPTAN1-216ENST00000629047 DNAJC5Q9H3Z4 198 aa4.45□□□□□ -1.7
SPTAN1-216ENST00000629047 CAMK2BQ13554 666 aa4.44□□□□□ -1.7
SPTAN1-216ENST00000629047 SUZ12Q15022 739 aaKnown RBP4.44□□□□□ -1.7
SPTAN1-216ENST00000629047 ANKLE1Q8NAG6 615 aa4.44□□□□□ -1.7
SPTAN1-216ENST00000629047 PCDHB3Q9Y5E6 796 aa4.44□□□□□ -1.7
SPTAN1-216ENST00000629047 CRIPAKQ8N1N5 446 aa4.43□□□□□ -1.7
SPTAN1-216ENST00000629047 AXIN1O15169 862 aa4.41□□□□□ -1.7
SPTAN1-216ENST00000629047 PADI6Q6TGC4 694 aa4.41□□□□□ -1.7
SPTAN1-216ENST00000629047 TERTO14746 1132 aaKnown RBP4.4□□□□□ -1.71
SPTAN1-216ENST00000629047 AVPP01185 164 aa4.4□□□□□ -1.71
SPTAN1-216ENST00000629047 TOR4AQ9NXH8 423 aa4.4□□□□□ -1.71
SPTAN1-216ENST00000629047 GRXCR2A6NFK2 248 aa4.39□□□□□ -1.71
SPTAN1-216ENST00000629047 PDIA6Q15084 440 aa4.39□□□□□ -1.71
SPTAN1-216ENST00000629047 SLF2Q8IX21 1173 aa4.39□□□□□ -1.71
SPTAN1-216ENST00000629047 GMPRP36959 345 aa4.38□□□□□ -1.71
SPTAN1-216ENST00000629047 TTC13Q8NBP0 860 aa4.38□□□□□ -1.71
SPTAN1-216ENST00000629047 RYDENQ9NUL5 291 aaKnown RBP4.38□□□□□ -1.71
SPTAN1-216ENST00000629047 ADH1BP00325 375 aa4.37□□□□□ -1.71
SPTAN1-216ENST00000629047 VEGFBP49765 207 aa4.37□□□□□ -1.71
SPTAN1-216ENST00000629047 HDGFP51858 240 aaKnown RBP4.37□□□□□ -1.71
SPTAN1-216ENST00000629047 ATP13A2Q9NQ11 1180 aa4.37□□□□□ -1.71
SPTAN1-216ENST00000629047 EYA1Q99502 592 aa4.36□□□□□ -1.71
SPTAN1-216ENST00000629047 SLC6A16Q9GZN6 736 aa4.36□□□□□ -1.71
SPTAN1-216ENST00000629047 OSBPP22059 807 aa4.35□□□□□ -1.71
SPTAN1-216ENST00000629047 SMCPP49901 116 aaPredicted RBP4.35□□□□□ -1.71
SPTAN1-216ENST00000629047 CYP4X1Q8N118 509 aa4.35□□□□□ -1.71
SPTAN1-216ENST00000629047 NPDC1Q9NQX5 325 aaPredicted RBP4.35□□□□□ -1.71
SPTAN1-216ENST00000629047 CFHP08603 1231 aa4.34□□□□□ -1.71
SPTAN1-216ENST00000629047 SMPD1P17405 629 aa4.34□□□□□ -1.71
SPTAN1-216ENST00000629047 PUS10Q3MIT2 529 aaKnown RBP4.34□□□□□ -1.71
SPTAN1-216ENST00000629047 ZSCAN1Q8NBB4 408 aa4.34□□□□□ -1.71
SPTAN1-216ENST00000629047 CERKQ8TCT0 537 aa4.34□□□□□ -1.71
SPTAN1-216ENST00000629047 TRIM47Q96LD4 638 aa4.34□□□□□ -1.71
SPTAN1-216ENST00000629047 ERBB4Q15303 1308 aa4.33□□□□□ -1.72
SPTAN1-216ENST00000629047 ACTN4O43707 911 aaKnown RBP4.33□□□□□ -1.72
SPTAN1-216ENST00000629047 CTC1Q2NKJ3 1217 aa4.33□□□□□ -1.72
SPTAN1-216ENST00000629047 KCTD17Q8N5Z5 321 aa4.33□□□□□ -1.72
SPTAN1-216ENST00000629047 RBM27Q9P2N5 1060 aaKnown RBP4.33□□□□□ -1.72
SPTAN1-216ENST00000629047 FCF1Q9Y324 198 aaKnown RBP4.33□□□□□ -1.72
SPTAN1-216ENST00000629047 J3QL48 77 aa4.32□□□□□ -1.72
SPTAN1-216ENST00000629047 SLC10A3P09131 477 aa4.32□□□□□ -1.72
SPTAN1-216ENST00000629047 FAM161AQ3B820 660 aa4.32□□□□□ -1.72
SPTAN1-216ENST00000629047 NECTIN2Q92692 538 aa4.32□□□□□ -1.72
SPTAN1-216ENST00000629047 PRDM9Q9NQV7 894 aa4.32□□□□□ -1.72
SPTAN1-216ENST00000629047 GSK3AP49840 483 aa4.31□□□□□ -1.72
SPTAN1-216ENST00000629047 LMOD2Q6P5Q4 547 aa4.31□□□□□ -1.72
SPTAN1-216ENST00000629047 PRR14Q9BWN1 585 aa4.31□□□□□ -1.72
SPTAN1-216ENST00000629047 TTC24A2A3L6 582 aaPredicted RBP4.3□□□□□ -1.72
SPTAN1-216ENST00000629047 HPS1Q92902 700 aa4.3□□□□□ -1.72
SPTAN1-216ENST00000629047 RPIAP49247 311 aa4.29□□□□□ -1.72
SPTAN1-216ENST00000629047 KMT5BQ4FZB7 885 aa4.29□□□□□ -1.72
SPTAN1-216ENST00000629047 SCUBE3Q8IX30 993 aa4.29□□□□□ -1.72
SPTAN1-216ENST00000629047 SPSB2Q99619 263 aa4.29□□□□□ -1.72
SPTAN1-216ENST00000629047 TMEM134Q9H6X4 195 aa4.29□□□□□ -1.72
SPTAN1-216ENST00000629047 FAM181BA6NEQ2 426 aa4.28□□□□□ -1.72
SPTAN1-216ENST00000629047 SPDYE16A6NNV3 312 aaPredicted RBP4.28□□□□□ -1.72
SPTAN1-216ENST00000629047 NR1I2O75469 434 aa4.28□□□□□ -1.72
SPTAN1-216ENST00000629047 BMP1P13497 986 aa4.28□□□□□ -1.72
SPTAN1-216ENST00000629047 DNAJB2P25686 324 aa4.27□□□□□ -1.73
SPTAN1-216ENST00000629047 FAM160A2Q8N612 972 aaPredicted RBP4.27□□□□□ -1.73
SPTAN1-216ENST00000629047 RCCD1A6NED2 376 aa4.26□□□□□ -1.73
SPTAN1-216ENST00000629047 SLC4A3P48751 1232 aa4.26□□□□□ -1.73
SPTAN1-216ENST00000629047 TRIM46Q7Z4K8 759 aa4.26□□□□□ -1.73
SPTAN1-216ENST00000629047 MRGPRX2Q96LB1 330 aa4.26□□□□□ -1.73
SPTAN1-216ENST00000629047 SENP2Q9HC62 589 aa4.26□□□□□ -1.73
SPTAN1-216ENST00000629047 NXF1Q9UBU9 619 aaKnown RBP4.26□□□□□ -1.73
SPTAN1-216ENST00000629047 H3BM21 787 aa4.25□□□□□ -1.73
SPTAN1-216ENST00000629047 SLC16A10Q8TF71 515 aa4.25□□□□□ -1.73
SPTAN1-216ENST00000629047 ADGRG1Q9Y653 693 aa4.25□□□□□ -1.73
SPTAN1-216ENST00000629047 CD2BP2O95400 341 aaKnown RBP4.24□□□□□ -1.73
SPTAN1-216ENST00000629047 XP32Q5T750 250 aa4.24□□□□□ -1.73
SPTAN1-216ENST00000629047 SNIP1Q8TAD8 396 aaKnown RBP4.24□□□□□ -1.73
SPTAN1-216ENST00000629047 IRF7Q92985 503 aa4.24□□□□□ -1.73
SPTAN1-216ENST00000629047 THAP11Q96EK4 314 aa4.24□□□□□ -1.73
SPTAN1-216ENST00000629047 WNT7AO00755 349 aa4.23□□□□□ -1.73
SPTAN1-216ENST00000629047 KIFC2Q96AC6 838 aa4.23□□□□□ -1.73
SPTAN1-216ENST00000629047 SOBPA7XYQ1 873 aa4.22□□□□□ -1.73
SPTAN1-216ENST00000629047 MORN1Q5T089 497 aa4.22□□□□□ -1.73
SPTAN1-216ENST00000629047 SKOR1P84550 965 aa4.21□□□□□ -1.74
SPTAN1-216ENST00000629047 KCNMA1Q12791 1236 aa4.21□□□□□ -1.74
SPTAN1-216ENST00000629047 TRIM32Q13049 653 aa4.21□□□□□ -1.74
SPTAN1-216ENST00000629047 RNF19BQ6ZMZ0 732 aa4.21□□□□□ -1.74
SPTAN1-216ENST00000629047 RBM46Q8TBY0 533 aaKnown RBP4.21□□□□□ -1.74
SPTAN1-216ENST00000629047 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
SPTAN1-216ENST00000629047 MLLT3P42568 568 aaPredicted RBP4.2□□□□□ -1.74
SPTAN1-216ENST00000629047 FUT2Q10981 343 aa4.2□□□□□ -1.74
SPTAN1-216ENST00000629047 E2F4Q16254 413 aa4.2□□□□□ -1.74
SPTAN1-216ENST00000629047 SLC27A5Q9Y2P5 690 aa4.2□□□□□ -1.74
SPTAN1-216ENST00000629047 PTGDRQ13258 359 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms