RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 SYNMO15061 1565 aa9.81□□□□□ -0.84
CTNNA1-244ENST00000627109 IRX6P78412 446 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-244ENST00000627109 NRXN1Q9ULB1 1477 aa9.8□□□□□ -0.84
CTNNA1-244ENST00000627109 WASHC2CQ9Y4E1 1318 aa9.8□□□□□ -0.84
CTNNA1-244ENST00000627109 TSPOAP1O95153 1857 aa9.79□□□□□ -0.84
CTNNA1-244ENST00000627109 ZC3H13Q5T200 1668 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-244ENST00000627109 MYOM2P54296 1465 aa9.79□□□□□ -0.84
CTNNA1-244ENST00000627109 EFCAB6Q5THR3 1501 aa9.79□□□□□ -0.84
CTNNA1-244ENST00000627109 MAP3K4Q9Y6R4 1608 aa9.79□□□□□ -0.84
CTNNA1-244ENST00000627109 FANCAO15360 1455 aa9.79□□□□□ -0.84
CTNNA1-244ENST00000627109 PNISRQ8TF01 805 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-244ENST00000627109 MRS2Q9HD23 443 aa9.78□□□□□ -0.84
CTNNA1-244ENST00000627109 KIF1BO60333 1816 aa9.78□□□□□ -0.84
CTNNA1-244ENST00000627109 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
CTNNA1-244ENST00000627109 CARD11Q9BXL7 1154 aa9.78□□□□□ -0.84
CTNNA1-244ENST00000627109 MROH2AA6NES4 1674 aa9.78□□□□□ -0.84
CTNNA1-244ENST00000627109 PPRC1Q5VV67 1664 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-244ENST00000627109 KIF3BO15066 747 aa9.77□□□□□ -0.84
CTNNA1-244ENST00000627109 TESK2Q96S53 571 aa9.77□□□□□ -0.84
CTNNA1-244ENST00000627109 BLMP54132 1417 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-244ENST00000627109 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-244ENST00000627109 RALBP1Q15311 655 aa9.77□□□□□ -0.85
CTNNA1-244ENST00000627109 FAM9BQ8IZU0 186 aa9.77□□□□□ -0.85
CTNNA1-244ENST00000627109 ABCA6Q8N139 1617 aa9.77□□□□□ -0.85
CTNNA1-244ENST00000627109 SETBP1Q9Y6X0 1596 aa9.76□□□□□ -0.85
CTNNA1-244ENST00000627109 MYBBP1AQ9BQG0 1328 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-244ENST00000627109 ST20-MTHFSA0A0A6YYL1 179 aa9.76□□□□□ -0.85
CTNNA1-244ENST00000627109 ADGRL1O94910 1474 aa9.75□□□□□ -0.85
CTNNA1-244ENST00000627109 DCAF11Q8TEB1 546 aa9.75□□□□□ -0.85
CTNNA1-244ENST00000627109 PPLO60437 1756 aa9.75□□□□□ -0.85
CTNNA1-244ENST00000627109 FRMPD1Q5SYB0 1578 aa9.75□□□□□ -0.85
CTNNA1-244ENST00000627109 KDM5AP29375 1690 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-244ENST00000627109 ADGRB3O60242 1522 aa9.75□□□□□ -0.85
CTNNA1-244ENST00000627109 SENP3-EIF4A1A0A087X0R7 540 aa9.74□□□□□ -0.85
CTNNA1-244ENST00000627109 DISP3Q9P2K9 1392 aa9.74□□□□□ -0.85
CTNNA1-244ENST00000627109 PIK3C2BO00750 1634 aa9.74□□□□□ -0.85
CTNNA1-244ENST00000627109 PPP4R2Q9NY27 417 aa9.73□□□□□ -0.85
CTNNA1-244ENST00000627109 HECW2Q9P2P5 1572 aa9.73□□□□□ -0.85
CTNNA1-244ENST00000627109 SENP3Q9H4L4 574 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-244ENST00000627109 SCAF11Q99590 1463 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-244ENST00000627109 NUDCQ9Y266 331 aa9.72□□□□□ -0.85
CTNNA1-244ENST00000627109 USP32Q8NFA0 1604 aa9.72□□□□□ -0.85
CTNNA1-244ENST00000627109 NPC1L1Q9UHC9 1359 aa9.72□□□□□ -0.85
CTNNA1-244ENST00000627109 ZNF518AQ6AHZ1 1483 aa9.71□□□□□ -0.85
CTNNA1-244ENST00000627109 MLH3Q9UHC1 1453 aa9.71□□□□□ -0.86
CTNNA1-244ENST00000627109 RBM19Q9Y4C8 960 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-244ENST00000627109 PLCB2Q00722 1185 aa9.7□□□□□ -0.86
CTNNA1-244ENST00000627109 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
CTNNA1-244ENST00000627109 FANCIQ9NVI1 1328 aa9.7□□□□□ -0.86
CTNNA1-244ENST00000627109 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-244ENST00000627109 ARID3AQ99856 593 aa9.69□□□□□ -0.86
CTNNA1-244ENST00000627109 CAMSAP1Q5T5Y3 1602 aa9.69□□□□□ -0.86
CTNNA1-244ENST00000627109 RICTORQ6R327 1708 aa9.69□□□□□ -0.86
CTNNA1-244ENST00000627109 SIGLEC1Q9BZZ2 1709 aa9.69□□□□□ -0.86
CTNNA1-244ENST00000627109 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
CTNNA1-244ENST00000627109 SBNO2Q9Y2G9 1366 aa9.68□□□□□ -0.86
CTNNA1-244ENST00000627109 NLRP13Q86W25 1043 aa9.68□□□□□ -0.86
CTNNA1-244ENST00000627109 POGZQ7Z3K3 1410 aa9.68□□□□□ -0.86
CTNNA1-244ENST00000627109 KDM2AQ9Y2K7 1162 aa9.68□□□□□ -0.86
CTNNA1-244ENST00000627109 ASXL1Q8IXJ9 1541 aa9.67□□□□□ -0.86
CTNNA1-244ENST00000627109 ADGRB1O14514 1584 aa9.67□□□□□ -0.86
CTNNA1-244ENST00000627109 PIK3C2GO75747 1445 aa9.67□□□□□ -0.86
CTNNA1-244ENST00000627109 CEBPAP49715 358 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-244ENST00000627109 STAG3Q9UJ98 1225 aa9.66□□□□□ -0.86
CTNNA1-244ENST00000627109 PDE3BQ13370 1112 aa9.66□□□□□ -0.86
CTNNA1-244ENST00000627109 ERVK-7P63135 1459 aa9.66□□□□□ -0.86
CTNNA1-244ENST00000627109 UGGT1Q9NYU2 1555 aa9.65□□□□□ -0.86
CTNNA1-244ENST00000627109 QRICH2Q9H0J4 1663 aa9.65□□□□□ -0.86
CTNNA1-244ENST00000627109 ABCC3O15438 1527 aa9.65□□□□□ -0.86
CTNNA1-244ENST00000627109 SHPRHQ149N8 1683 aa9.65□□□□□ -0.87
CTNNA1-244ENST00000627109 NEO1Q92859 1461 aa9.65□□□□□ -0.87
CTNNA1-244ENST00000627109 KANK1Q14678 1352 aa9.64□□□□□ -0.87
CTNNA1-244ENST00000627109 YEATS2Q9ULM3 1422 aa9.64□□□□□ -0.87
CTNNA1-244ENST00000627109 GLI2P10070 1586 aa9.64□□□□□ -0.87
CTNNA1-244ENST00000627109 ADRA2BP18089 450 aa9.64□□□□□ -0.87
CTNNA1-244ENST00000627109 ANP32EQ9BTT0 268 aa9.64□□□□□ -0.87
CTNNA1-244ENST00000627109 DIP2CQ9Y2E4 1556 aa9.64□□□□□ -0.87
CTNNA1-244ENST00000627109 ARHGEF28Q8N1W1 1705 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-244ENST00000627109 TMF1P82094 1093 aa9.63□□□□□ -0.87
CTNNA1-244ENST00000627109 TMC1Q8TDI8 760 aa9.63□□□□□ -0.87
CTNNA1-244ENST00000627109 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-244ENST00000627109 NOS1P29475 1434 aa9.62□□□□□ -0.87
CTNNA1-244ENST00000627109 SALL2Q9Y467 1007 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-244ENST00000627109 ARHGAP31Q2M1Z3 1444 aa9.62□□□□□ -0.87
CTNNA1-244ENST00000627109 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
CTNNA1-244ENST00000627109 CLTCQ00610 1675 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-244ENST00000627109 REREQ9P2R6 1566 aa9.61□□□□□ -0.87
CTNNA1-244ENST00000627109 NPATQ14207 1427 aa9.6□□□□□ -0.87
CTNNA1-244ENST00000627109 ZNF521Q96K83 1311 aa9.6□□□□□ -0.87
CTNNA1-244ENST00000627109 RGL3Q3MIN7 710 aa9.6□□□□□ -0.87
CTNNA1-244ENST00000627109 PANK3Q9H999 370 aa9.59□□□□□ -0.87
CTNNA1-244ENST00000627109 ANKRD26Q9UPS8 1709 aa9.59□□□□□ -0.87
CTNNA1-244ENST00000627109 MSH5O43196 834 aa9.58□□□□□ -0.88
CTNNA1-244ENST00000627109 FBXO31Q5XUX0 539 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-244ENST00000627109 PREX1Q8TCU6 1659 aa9.58□□□□□ -0.88
CTNNA1-244ENST00000627109 CDCA8Q53HL2 280 aa9.58□□□□□ -0.88
CTNNA1-244ENST00000627109 B4GALNT3Q6L9W6 998 aa9.58□□□□□ -0.88
CTNNA1-244ENST00000627109 ZFYVE9O95405 1425 aa9.58□□□□□ -0.88
CTNNA1-244ENST00000627109 RRP1P56182 461 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-244ENST00000627109 KIF13AQ9H1H9 1805 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms