RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 SPRYD7Q5W111 196 aa11.89□□□□□ -0.51
TCF4-250ENST00000625849 TLL1O43897 1013 aa11.88□□□□□ -0.51
TCF4-250ENST00000625849 PRR20EP86478 221 aa11.88□□□□□ -0.51
TCF4-250ENST00000625849 PRR20CP86479 221 aa11.88□□□□□ -0.51
TCF4-250ENST00000625849 PRR20DP86480 221 aa11.88□□□□□ -0.51
TCF4-250ENST00000625849 PRR20BP86481 221 aa11.88□□□□□ -0.51
TCF4-250ENST00000625849 PRR20AP86496 221 aa11.88□□□□□ -0.51
TCF4-250ENST00000625849 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
TCF4-250ENST00000625849 DNAJB2P25686 324 aa11.87□□□□□ -0.51
TCF4-250ENST00000625849 MYT1Q01538 1121 aa11.87□□□□□ -0.51
TCF4-250ENST00000625849 ANKLE1Q8NAG6 615 aa11.87□□□□□ -0.51
TCF4-250ENST00000625849 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
TCF4-250ENST00000625849 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
TCF4-250ENST00000625849 PPEF1O14829 653 aaPredicted RBP11.83□□□□□ -0.52
TCF4-250ENST00000625849 ACTN4O43707 911 aaKnown RBP11.83□□□□□ -0.52
TCF4-250ENST00000625849 S1PR4O95977 384 aa11.83□□□□□ -0.52
TCF4-250ENST00000625849 ZNF697Q5TEC3 545 aa11.83□□□□□ -0.52
TCF4-250ENST00000625849 LIAT1Q6ZQX7 453 aa11.82□□□□□ -0.52
TCF4-250ENST00000625849 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
TCF4-250ENST00000625849 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
TCF4-250ENST00000625849 TMEM134Q9H6X4 195 aa11.82□□□□□ -0.52
TCF4-250ENST00000625849 FAM187AA6NFU0 413 aa11.8□□□□□ -0.52
TCF4-250ENST00000625849 CFHP08603 1231 aa11.79□□□□□ -0.52
TCF4-250ENST00000625849 PTGDRQ13258 359 aa11.79□□□□□ -0.52
TCF4-250ENST00000625849 POTECB2RU33 542 aa11.78□□□□□ -0.52
TCF4-250ENST00000625849 TNFRSF10AO00220 468 aa11.78□□□□□ -0.52
TCF4-250ENST00000625849 GDF9O60383 454 aa11.78□□□□□ -0.52
TCF4-250ENST00000625849 ADH1BP00325 375 aa11.78□□□□□ -0.52
TCF4-250ENST00000625849 ADGRG1Q9Y653 693 aa11.78□□□□□ -0.52
TCF4-250ENST00000625849 MLLT3P42568 568 aaPredicted RBP11.77□□□□□ -0.53
TCF4-250ENST00000625849 RCCD1A6NED2 376 aa11.76□□□□□ -0.53
TCF4-250ENST00000625849 NR1I2O75469 434 aa11.75□□□□□ -0.53
TCF4-250ENST00000625849 SLC6A16Q9GZN6 736 aa11.74□□□□□ -0.53
TCF4-250ENST00000625849 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
TCF4-250ENST00000625849 SLC10A3P09131 477 aa11.71□□□□□ -0.53
TCF4-250ENST00000625849 PLA2G2CQ5R387 149 aa11.71□□□□□ -0.53
TCF4-250ENST00000625849 ST8SIA5O15466 376 aa11.7□□□□□ -0.54
TCF4-250ENST00000625849 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
TCF4-250ENST00000625849 AAASQ9NRG9 546 aa11.7□□□□□ -0.54
TCF4-250ENST00000625849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
TCF4-250ENST00000625849 NUTM2FA1L443 756 aa11.67□□□□□ -0.54
TCF4-250ENST00000625849 LMOD2Q6P5Q4 547 aa11.67□□□□□ -0.54
TCF4-250ENST00000625849 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
TCF4-250ENST00000625849 SCUBE3Q8IX30 993 aa11.66□□□□□ -0.54
TCF4-250ENST00000625849 FOXC1Q12948 553 aa11.65□□□□□ -0.54
TCF4-250ENST00000625849 PKD2L1Q9P0L9 805 aa11.65□□□□□ -0.54
TCF4-250ENST00000625849 SPSB2Q99619 263 aa11.64□□□□□ -0.55
TCF4-250ENST00000625849 LCE2AQ5TA79 106 aaPredicted RBP11.63□□□□□ -0.55
TCF4-250ENST00000625849 KCNV2Q8TDN2 545 aa11.63□□□□□ -0.55
TCF4-250ENST00000625849 FCHSD2O94868 740 aa11.62□□□□□ -0.55
TCF4-250ENST00000625849 PUS10Q3MIT2 529 aaKnown RBP11.62□□□□□ -0.55
TCF4-250ENST00000625849 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
TCF4-250ENST00000625849 CRIPAKQ8N1N5 446 aa11.61□□□□□ -0.55
TCF4-250ENST00000625849 PXYLP1Q8TE99 480 aa11.61□□□□□ -0.55
TCF4-250ENST00000625849 OATP04181 439 aa11.6□□□□□ -0.55
TCF4-250ENST00000625849 RPIAP49247 311 aa11.6□□□□□ -0.55
TCF4-250ENST00000625849 AVPP01185 164 aa11.57□□□□□ -0.56
TCF4-250ENST00000625849 CYP4X1Q8N118 509 aa11.56□□□□□ -0.56
TCF4-250ENST00000625849 TOR4AQ9NXH8 423 aa11.56□□□□□ -0.56
TCF4-250ENST00000625849 DACH1Q9UI36 760 aa11.56□□□□□ -0.56
TCF4-250ENST00000625849 FCF1Q9Y324 198 aaKnown RBP11.56□□□□□ -0.56
TCF4-250ENST00000625849 AXIN1O15169 862 aa11.55□□□□□ -0.56
TCF4-250ENST00000625849 CD2BP2O95400 341 aaKnown RBP11.55□□□□□ -0.56
TCF4-250ENST00000625849 GMPR2Q9P2T1 348 aaKnown RBP11.54□□□□□ -0.56
TCF4-250ENST00000625849 WFS1O76024 890 aa11.53□□□□□ -0.56
TCF4-250ENST00000625849 CTC1Q2NKJ3 1217 aa11.53□□□□□ -0.56
TCF4-250ENST00000625849 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
TCF4-250ENST00000625849 METTL3Q86U44 580 aaKnown RBP11.53□□□□□ -0.56
TCF4-250ENST00000625849 MORN1Q5T089 497 aa11.52□□□□□ -0.57
TCF4-250ENST00000625849 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
TCF4-250ENST00000625849 RDH13Q8NBN7 331 aa11.51□□□□□ -0.57
TCF4-250ENST00000625849 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
TCF4-250ENST00000625849 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
TCF4-250ENST00000625849 HIC1Q14526 733 aa11.5□□□□□ -0.57
TCF4-250ENST00000625849 FMNL1O95466 1100 aaPredicted RBP11.49□□□□□ -0.57
TCF4-250ENST00000625849 TSHZ2Q9NRE2 1034 aa11.49□□□□□ -0.57
TCF4-250ENST00000625849 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
TCF4-250ENST00000625849 FUT2Q10981 343 aa11.48□□□□□ -0.57
TCF4-250ENST00000625849 DAXXQ9UER7 740 aaPredicted RBP11.48□□□□□ -0.57
TCF4-250ENST00000625849 FAM160A2Q8N612 972 aaPredicted RBP11.47□□□□□ -0.57
TCF4-250ENST00000625849 TTC24A2A3L6 582 aaPredicted RBP11.46□□□□□ -0.57
TCF4-250ENST00000625849 SEMA3EO15041 775 aa11.46□□□□□ -0.57
TCF4-250ENST00000625849 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
TCF4-250ENST00000625849 SLC27A5Q9Y2P5 690 aa11.46□□□□□ -0.57
TCF4-250ENST00000625849 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
TCF4-250ENST00000625849 ZBTB24O43167 697 aaPredicted RBP11.45□□□□□ -0.58
TCF4-250ENST00000625849 NFX1Q12986 1120 aaKnown RBP11.45□□□□□ -0.58
TCF4-250ENST00000625849 PRDM9Q9NQV7 894 aa11.44□□□□□ -0.58
TCF4-250ENST00000625849 STK17AQ9UEE5 414 aa11.44□□□□□ -0.58
TCF4-250ENST00000625849 SALL2Q9Y467 1007 aaPredicted RBP11.44□□□□□ -0.58
TCF4-250ENST00000625849 WIPF1O43516 503 aa11.42□□□□□ -0.58
TCF4-250ENST00000625849 GCGRP47871 477 aa11.41□□□□□ -0.58
TCF4-250ENST00000625849 INSM1Q01101 510 aaPredicted RBP11.41□□□□□ -0.58
TCF4-250ENST00000625849 MSS51Q4VC12 460 aa11.41□□□□□ -0.58
TCF4-250ENST00000625849 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
TCF4-250ENST00000625849 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
TCF4-250ENST00000625849 WNT7AO00755 349 aa11.4□□□□□ -0.58
TCF4-250ENST00000625849 GNPATO15228 680 aa11.4□□□□□ -0.58
TCF4-250ENST00000625849 SULF1Q8IWU6 871 aa11.4□□□□□ -0.58
TCF4-250ENST00000625849 SMPD1P17405 629 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms