RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 MYOM2P54296 1465 aa27.2■■□□□ 1.94
TREX1-205ENST00000625293 FBXO31Q5XUX0 539 aaPredicted RBP27.19■■□□□ 1.94
TREX1-205ENST00000625293 CAMSAP1Q5T5Y3 1602 aa27.19■■□□□ 1.94
TREX1-205ENST00000625293 ADGRB3O60242 1522 aa27.18■■□□□ 1.94
TREX1-205ENST00000625293 KIF1BO60333 1816 aa27.17■■□□□ 1.94
TREX1-205ENST00000625293 HSPA2P54652 639 aa27.17■■□□□ 1.94
TREX1-205ENST00000625293 MROH2AA6NES4 1674 aa27.15■■□□□ 1.94
TREX1-205ENST00000625293 ZC3H13Q5T200 1668 aaKnown RBP27.15■■□□□ 1.94
TREX1-205ENST00000625293 IFT172Q9UG01 1749 aa27.15■■□□□ 1.94
TREX1-205ENST00000625293 NOS1P29475 1434 aa27.15■■□□□ 1.94
TREX1-205ENST00000625293 ARHGAP31Q2M1Z3 1444 aa27.15■■□□□ 1.94
TREX1-205ENST00000625293 KIAA1210Q9ULL0 1709 aa27.14■■□□□ 1.94
TREX1-205ENST00000625293 TESK2Q96S53 571 aa27.14■■□□□ 1.93
TREX1-205ENST00000625293 IQGAP1P46940 1657 aa27.14■■□□□ 1.93
TREX1-205ENST00000625293 LMTK3Q96Q04 1460 aa27.13■■□□□ 1.93
TREX1-205ENST00000625293 NRXN1Q9ULB1 1477 aa27.12■■□□□ 1.93
TREX1-205ENST00000625293 POLR3GLQ9BT43 218 aa27.09■■□□□ 1.93
TREX1-205ENST00000625293 SCAF11Q99590 1463 aaKnown RBP27.08■■□□□ 1.93
TREX1-205ENST00000625293 PIK3C2BO00750 1634 aa27.08■■□□□ 1.92
TREX1-205ENST00000625293 SYNMO15061 1565 aa27.06■■□□□ 1.92
TREX1-205ENST00000625293 SETD1BQ9UPS6 1966 aaKnown RBP27.06■■□□□ 1.92
TREX1-205ENST00000625293 DISP3Q9P2K9 1392 aa27.06■■□□□ 1.92
TREX1-205ENST00000625293 CCDC184Q52MB2 194 aa27.04■■□□□ 1.92
TREX1-205ENST00000625293 ADGRF5Q8IZF2 1346 aa27.04■■□□□ 1.92
TREX1-205ENST00000625293 CFAP65Q6ZU64 1925 aaKnown RBP27.03■■□□□ 1.92
TREX1-205ENST00000625293 PREX1Q8TCU6 1659 aa27.01■■□□□ 1.91
TREX1-205ENST00000625293 PPLO60437 1756 aa26.99■■□□□ 1.91
TREX1-205ENST00000625293 RPGRIP1LQ68CZ1 1315 aa26.98■■□□□ 1.91
TREX1-205ENST00000625293 TMF1P82094 1093 aa26.98■■□□□ 1.91
TREX1-205ENST00000625293 TNRQ92752 1358 aa26.97■■□□□ 1.91
TREX1-205ENST00000625293 CFAP70Q5T0N1 1121 aa26.96■■□□□ 1.91
TREX1-205ENST00000625293 PIK3C2GO75747 1445 aa26.95■■□□□ 1.91
TREX1-205ENST00000625293 MRS2Q9HD23 443 aa26.94■■□□□ 1.9
TREX1-205ENST00000625293 SETBP1Q9Y6X0 1596 aa26.94■■□□□ 1.9
TREX1-205ENST00000625293 EIF3AQ14152 1382 aaKnown RBP26.94■■□□□ 1.9
TREX1-205ENST00000625293 KTN1Q86UP2 1357 aaKnown RBP26.94■■□□□ 1.9
TREX1-205ENST00000625293 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
TREX1-205ENST00000625293 ERVK-7P63135 1459 aa26.91■■□□□ 1.9
TREX1-205ENST00000625293 PER1O15534 1290 aaPredicted RBP26.91■■□□□ 1.9
TREX1-205ENST00000625293 MYO3AQ8NEV4 1616 aa26.91■■□□□ 1.9
TREX1-205ENST00000625293 NEXMIFQ5QGS0 1516 aa26.9■■□□□ 1.9
TREX1-205ENST00000625293 SLC52A1Q9NWF4 448 aa26.9■■□□□ 1.9
TREX1-205ENST00000625293 IDI1Q13907 227 aa26.87■■□□□ 1.89
TREX1-205ENST00000625293 C14orf93Q9H972 538 aaKnown RBP26.87■■□□□ 1.89
TREX1-205ENST00000625293 ADGRB1O14514 1584 aa26.87■■□□□ 1.89
TREX1-205ENST00000625293 SPATA31D1Q6ZQQ2 1576 aa26.87■■□□□ 1.89
TREX1-205ENST00000625293 RALBP1Q15311 655 aa26.86■■□□□ 1.89
TREX1-205ENST00000625293 CEP170BQ9Y4F5 1589 aaPredicted RBP26.85■■□□□ 1.89
TREX1-205ENST00000625293 HNRNPUQ00839 825 aaKnown RBP eCLIP26.85■■□□□ 1.89
TREX1-205ENST00000625293 PARD3Q8TEW0 1356 aa26.84■■□□□ 1.89
TREX1-205ENST00000625293 ZFYVE9O95405 1425 aa26.83■■□□□ 1.89
TREX1-205ENST00000625293 A2ML1A8K2U0 1454 aa26.83■■□□□ 1.89
TREX1-205ENST00000625293 TMEM131LA2VDJ0 1609 aa26.83■■□□□ 1.89
TREX1-205ENST00000625293 CDCA8Q53HL2 280 aa26.82■■□□□ 1.88
TREX1-205ENST00000625293 NCKAP5LQ9HCH0 1330 aa26.82■■□□□ 1.88
TREX1-205ENST00000625293 SBNO2Q9Y2G9 1366 aa26.82■■□□□ 1.88
TREX1-205ENST00000625293 MYBBP1AQ9BQG0 1328 aaKnown RBP26.81■■□□□ 1.88
TREX1-205ENST00000625293 SLC24A1O60721 1099 aa26.8■■□□□ 1.88
TREX1-205ENST00000625293 FAM9BQ8IZU0 186 aa26.8■■□□□ 1.88
TREX1-205ENST00000625293 PANK3Q9H999 370 aa26.8■■□□□ 1.88
TREX1-205ENST00000625293 STRCQ7RTU9 1775 aa26.8■■□□□ 1.88
TREX1-205ENST00000625293 ZNF142P52746 1687 aaPredicted RBP26.79■■□□□ 1.88
TREX1-205ENST00000625293 BRD4O60885 1362 aaPredicted RBP26.78■■□□□ 1.88
TREX1-205ENST00000625293 NLRP1Q9C000 1473 aa26.78■■□□□ 1.88
TREX1-205ENST00000625293 VGFO15240 615 aaPredicted RBP26.78■■□□□ 1.88
TREX1-205ENST00000625293 CNGB1Q14028 1251 aaPredicted RBP26.77■■□□□ 1.88
TREX1-205ENST00000625293 MYOM1P52179 1685 aa26.76■■□□□ 1.88
TREX1-205ENST00000625293 KDM5AP29375 1690 aaKnown RBP26.74■■□□□ 1.87
TREX1-205ENST00000625293 THEMISQ8N1K5 641 aaPredicted RBP26.74■■□□□ 1.87
TREX1-205ENST00000625293 PNISRQ8TF01 805 aaKnown RBP26.74■■□□□ 1.87
TREX1-205ENST00000625293 MYO5BQ9ULV0 1848 aa26.73■■□□□ 1.87
TREX1-205ENST00000625293 CENPJQ9HC77 1338 aaPredicted RBP26.72■■□□□ 1.87
TREX1-205ENST00000625293 ZBED9Q6R2W3 1325 aa26.71■■□□□ 1.87
TREX1-205ENST00000625293 LRPPRCP42704 1394 aaKnown RBP26.7■■□□□ 1.86
TREX1-205ENST00000625293 TMC1Q8TDI8 760 aa26.69■■□□□ 1.86
TREX1-205ENST00000625293 STAG3Q9UJ98 1225 aa26.69■■□□□ 1.86
TREX1-205ENST00000625293 NLRP13Q86W25 1043 aa26.69■■□□□ 1.86
TREX1-205ENST00000625293 NUTM2DQ5VT03 806 aaPredicted RBP26.68■■□□□ 1.86
TREX1-205ENST00000625293 TMEM132EQ6IEE7 984 aa26.68■■□□□ 1.86
TREX1-205ENST00000625293 SUPT16HQ9Y5B9 1047 aaKnown RBP26.68■■□□□ 1.86
TREX1-205ENST00000625293 TRAK1Q9UPV9 953 aa26.67■■□□□ 1.86
TREX1-205ENST00000625293 ASXL1Q8IXJ9 1541 aa26.67■■□□□ 1.86
TREX1-205ENST00000625293 UBR1Q8IWV7 1749 aa26.66■■□□□ 1.86
TREX1-205ENST00000625293 QRICH2Q9H0J4 1663 aa26.66■■□□□ 1.86
TREX1-205ENST00000625293 LTKP29376 864 aa26.64■■□□□ 1.86
TREX1-205ENST00000625293 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.86
TREX1-205ENST00000625293 AMER1Q5JTC6 1135 aaPredicted RBP26.63■■□□□ 1.85
TREX1-205ENST00000625293 CC2D1BQ5T0F9 858 aaKnown RBP26.63■■□□□ 1.85
TREX1-205ENST00000625293 ARHGEF28Q8N1W1 1705 aaKnown RBP26.63■■□□□ 1.85
TREX1-205ENST00000625293 NPC1L1Q9UHC9 1359 aa26.63■■□□□ 1.85
TREX1-205ENST00000625293 DMRT2Q9Y5R5 561 aa26.63■■□□□ 1.85
TREX1-205ENST00000625293 SENP3Q9H4L4 574 aaPredicted RBP26.61■■□□□ 1.85
TREX1-205ENST00000625293 KNSTRNQ9Y448 316 aa26.61■■□□□ 1.85
TREX1-205ENST00000625293 TXNDC2Q86VQ3 553 aa26.6■■□□□ 1.85
TREX1-205ENST00000625293 TMEM2Q9UHN6 1383 aa26.57■■□□□ 1.84
TREX1-205ENST00000625293 ALKQ9UM73 1620 aa26.55■■□□□ 1.84
TREX1-205ENST00000625293 PUS7Q96PZ0 661 aaKnown RBP26.54■■□□□ 1.84
TREX1-205ENST00000625293 ARHGAP23Q9P227 1491 aa26.54■■□□□ 1.84
TREX1-205ENST00000625293 TULP4Q9NRJ4 1543 aa26.53■■□□□ 1.84
TREX1-205ENST00000625293 RIMS2Q9UQ26 1411 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms