RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 TRIM6-TRIM34B2RNG4 842 aa7.03□□□□□ -1.28
ERCC6-213ENST00000624341 HDGFL2Q7Z4V5 671 aaPredicted RBP7.03□□□□□ -1.28
ERCC6-213ENST00000624341 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
ERCC6-213ENST00000624341 HNRNPMP52272 730 aaKnown RBP eCLIP7.02□□□□□ -1.29
ERCC6-213ENST00000624341 APAF1O14727 1248 aa7.02□□□□□ -1.29
ERCC6-213ENST00000624341 NFKBIBQ15653 356 aa7.02□□□□□ -1.29
ERCC6-213ENST00000624341 FOXD4L6Q3SYB3 417 aaPredicted RBP7.02□□□□□ -1.29
ERCC6-213ENST00000624341 FOXD4L3Q6VB84 417 aaPredicted RBP7.02□□□□□ -1.29
ERCC6-213ENST00000624341 ELL2O00472 640 aaPredicted RBP7.01□□□□□ -1.29
ERCC6-213ENST00000624341 SLC4A10Q6U841 1118 aa7.01□□□□□ -1.29
ERCC6-213ENST00000624341 CFAP74Q9C0B2 1584 aa7.01□□□□□ -1.29
ERCC6-213ENST00000624341 PAK3O75914 559 aaPredicted RBP7.01□□□□□ -1.29
ERCC6-213ENST00000624341 MLECQ14165 292 aa7.01□□□□□ -1.29
ERCC6-213ENST00000624341 ANKRD45Q5TZF3 282 aa7.01□□□□□ -1.29
ERCC6-213ENST00000624341 KRI1Q8N9T8 703 aaKnown RBP7.01□□□□□ -1.29
ERCC6-213ENST00000624341 CD109Q6YHK3 1445 aa7□□□□□ -1.29
ERCC6-213ENST00000624341 USP47Q96K76 1375 aa7□□□□□ -1.29
ERCC6-213ENST00000624341 ST18O60284 1047 aa7□□□□□ -1.29
ERCC6-213ENST00000624341 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
ERCC6-213ENST00000624341 NUTM2DQ5VT03 806 aaPredicted RBP7□□□□□ -1.29
ERCC6-213ENST00000624341 CGNL1Q0VF96 1302 aa7□□□□□ -1.29
ERCC6-213ENST00000624341 RAPGEF6Q8TEU7 1601 aa6.99□□□□□ -1.29
ERCC6-213ENST00000624341 IL27Q8NEV9 243 aa6.99□□□□□ -1.29
ERCC6-213ENST00000624341 ADGRL1O94910 1474 aa6.99□□□□□ -1.29
ERCC6-213ENST00000624341 E9PSI1 815 aa6.99□□□□□ -1.29
ERCC6-213ENST00000624341 HMMRO75330 724 aa6.99□□□□□ -1.29
ERCC6-213ENST00000624341 ANO8Q9HCE9 1232 aaPredicted RBP6.99□□□□□ -1.29
ERCC6-213ENST00000624341 STK31Q9BXU1 1019 aa6.99□□□□□ -1.29
ERCC6-213ENST00000624341 BRPF3Q9ULD4 1205 aa6.99□□□□□ -1.29
ERCC6-213ENST00000624341 ZKSCAN2Q63HK3 967 aa6.99□□□□□ -1.29
ERCC6-213ENST00000624341 TRAK1Q9UPV9 953 aa6.98□□□□□ -1.29
ERCC6-213ENST00000624341 KIF7Q2M1P5 1343 aa6.98□□□□□ -1.29
ERCC6-213ENST00000624341 KIF3BO15066 747 aa6.98□□□□□ -1.29
ERCC6-213ENST00000624341 TNNT3P45378 269 aaPredicted RBP6.98□□□□□ -1.29
ERCC6-213ENST00000624341 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
ERCC6-213ENST00000624341 FAM13BQ9NYF5 915 aa6.98□□□□□ -1.29
ERCC6-213ENST00000624341 ABCA9Q8IUA7 1624 aa6.98□□□□□ -1.29
ERCC6-213ENST00000624341 CCDC18Q5T9S5 1454 aa6.98□□□□□ -1.29
ERCC6-213ENST00000624341 HTATSF1O43719 755 aaKnown RBP6.97□□□□□ -1.29
ERCC6-213ENST00000624341 CHMP5Q9NZZ3 219 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 ARAP3Q8WWN8 1544 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 CCDC7Q96M83 1385 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 WASHC2AQ641Q2 1341 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 EIF3AQ14152 1382 aaKnown RBP6.97□□□□□ -1.29
ERCC6-213ENST00000624341 MAP3K1Q13233 1512 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 NEO1Q92859 1461 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 KDM4FA0A1W2PPD8 638 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 PHF14O94880 888 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 EFCAB2Q5VUJ9 269 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 TERF2IPQ9NYB0 399 aa6.97□□□□□ -1.29
ERCC6-213ENST00000624341 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.29
ERCC6-213ENST00000624341 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.96□□□□□ -1.29
ERCC6-213ENST00000624341 CDCA7LQ96GN5 454 aa6.96□□□□□ -1.29
ERCC6-213ENST00000624341 RILPL2Q969X0 211 aa6.96□□□□□ -1.3
ERCC6-213ENST00000624341 FRAT2O75474 233 aaPredicted RBP6.96□□□□□ -1.3
ERCC6-213ENST00000624341 NCBP3Q53F19 620 aaKnown RBP6.95□□□□□ -1.3
ERCC6-213ENST00000624341 NPHP1O15259 732 aa6.95□□□□□ -1.3
ERCC6-213ENST00000624341 CSPP1Q1MSJ5 1256 aa6.95□□□□□ -1.3
ERCC6-213ENST00000624341 FAM43AQ8N2R8 423 aa6.95□□□□□ -1.3
ERCC6-213ENST00000624341 SPAG9O60271 1321 aaKnown RBP6.95□□□□□ -1.3
ERCC6-213ENST00000624341 PANK1Q8TE04 598 aa6.95□□□□□ -1.3
ERCC6-213ENST00000624341 KIF16BQ96L93 1317 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 ZNF330Q9Y3S2 320 aaPredicted RBP6.94□□□□□ -1.3
ERCC6-213ENST00000624341 ATP10BO94823 1461 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 FYCO1Q9BQS8 1478 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 CCDC144AA2RUR9 1427 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 DZIP1LQ8IYY4 767 aaKnown RBP6.94□□□□□ -1.3
ERCC6-213ENST00000624341 HECW1Q76N89 1606 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 TPM4P67936 248 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 C22orf23Q9BZE7 217 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 LNPKQ9C0E8 428 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 CNTLNQ9NXG0 1405 aa6.94□□□□□ -1.3
ERCC6-213ENST00000624341 HDGFP51858 240 aaKnown RBP6.93□□□□□ -1.3
ERCC6-213ENST00000624341 DDX19BQ9UMR2 479 aa6.93□□□□□ -1.3
ERCC6-213ENST00000624341 CHMP3Q9Y3E7 222 aa6.93□□□□□ -1.3
ERCC6-213ENST00000624341 NUTM2FA1L443 756 aa6.93□□□□□ -1.3
ERCC6-213ENST00000624341 LMOD3Q0VAK6 560 aa6.93□□□□□ -1.3
ERCC6-213ENST00000624341 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
ERCC6-213ENST00000624341 CCDC184Q52MB2 194 aa6.92□□□□□ -1.3
ERCC6-213ENST00000624341 CREBRFQ8IUR6 639 aa6.92□□□□□ -1.3
ERCC6-213ENST00000624341 ADAMTS8Q9UP79 889 aa6.92□□□□□ -1.3
ERCC6-213ENST00000624341 SF3A1Q15459 793 aaKnown RBP6.92□□□□□ -1.3
ERCC6-213ENST00000624341 GORABQ5T7V8 394 aa6.92□□□□□ -1.3
ERCC6-213ENST00000624341 ZNF592Q92610 1267 aa6.92□□□□□ -1.3
ERCC6-213ENST00000624341 AKNAQ7Z591 1439 aa6.92□□□□□ -1.3
ERCC6-213ENST00000624341 CASKIN1Q8WXD9 1431 aa6.92□□□□□ -1.3
ERCC6-213ENST00000624341 MCTP1Q6DN14 999 aa6.92□□□□□ -1.3
ERCC6-213ENST00000624341 LTV1Q96GA3 475 aaPredicted RBP6.92□□□□□ -1.3
ERCC6-213ENST00000624341 MSH5O43196 834 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 ISY1Q9ULR0 285 aaKnown RBP6.91□□□□□ -1.3
ERCC6-213ENST00000624341 TRAK2O60296 914 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 MRE11P49959 708 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 RSPH4AQ5TD94 716 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 BECN2A8MW95 431 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 GOLGA6L19H0YKK7 550 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 BACH2Q9BYV9 841 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 REC8O95072 547 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 ATP6V1DQ9Y5K8 247 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 POGZQ7Z3K3 1410 aa6.91□□□□□ -1.3
ERCC6-213ENST00000624341 ZNF644Q9H582 1327 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms