RNA–Protein interactions for RNA: ENST00000623539.1

AP000648.3-201, humanhuman

BASIC

Gene AP000648.3, Length 4,507 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000648.3-201ENST00000623539 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.42□□□□□ -1.86
AP000648.3-201ENST00000623539 CLCN1P35523 988 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 PRR20EP86478 221 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 PRR20CP86479 221 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 PRR20DP86480 221 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 PRR20BP86481 221 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 PRR20AP86496 221 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 KMT5BQ4FZB7 885 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 LRCH3Q96II8 777 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 ZC3H4Q9UPT8 1303 aaKnown RBP3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 Q3C1V9 767 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 DCAF8L2P0C7V8 631 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 MCCD1P59942 119 aaPredicted RBP3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 ZC3H15Q8WU90 426 aaKnown RBP3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 WNT2BQ93097 391 aa3.41□□□□□ -1.86
AP000648.3-201ENST00000623539 SLC24A1O60721 1099 aa3.4□□□□□ -1.86
AP000648.3-201ENST00000623539 PPP2R2DQ66LE6 453 aa3.4□□□□□ -1.86
AP000648.3-201ENST00000623539 UPF1Q92900 1129 aaKnown RBP eCLIP3.4□□□□□ -1.86
AP000648.3-201ENST00000623539 MAP3K7O43318 606 aa3.4□□□□□ -1.87
AP000648.3-201ENST00000623539 HDGFP51858 240 aaKnown RBP3.4□□□□□ -1.87
AP000648.3-201ENST00000623539 SEMA3EO15041 775 aa3.4□□□□□ -1.87
AP000648.3-201ENST00000623539 NR1I2O75469 434 aa3.4□□□□□ -1.87
AP000648.3-201ENST00000623539 GRIPAP1Q4V328 841 aa3.4□□□□□ -1.87
AP000648.3-201ENST00000623539 FAM217BQ9NTX9 383 aaPredicted RBP3.4□□□□□ -1.87
AP000648.3-201ENST00000623539 SPTLC1O15269 473 aa3.39□□□□□ -1.87
AP000648.3-201ENST00000623539 TSR1Q2NL82 804 aaKnown RBP3.39□□□□□ -1.87
AP000648.3-201ENST00000623539 STAC3Q96MF2 364 aa3.39□□□□□ -1.87
AP000648.3-201ENST00000623539 SPDYE5A6NIY4 337 aa3.39□□□□□ -1.87
AP000648.3-201ENST00000623539 TRIM52Q96A61 297 aa3.39□□□□□ -1.87
AP000648.3-201ENST00000623539 GPKOWQ92917 476 aaPredicted RBP eCLIP3.39□□□□□ -1.87
AP000648.3-201ENST00000623539 RCCD1A6NED2 376 aa3.38□□□□□ -1.87
AP000648.3-201ENST00000623539 SMCPP49901 116 aaPredicted RBP3.38□□□□□ -1.87
AP000648.3-201ENST00000623539 CDHR5Q9HBB8 845 aa3.38□□□□□ -1.87
AP000648.3-201ENST00000623539 GPCPD1Q9NPB8 672 aa3.38□□□□□ -1.87
AP000648.3-201ENST00000623539 PNMA3Q9UL41 463 aa3.38□□□□□ -1.87
AP000648.3-201ENST00000623539 NUDT18Q6ZVK8 323 aa3.38□□□□□ -1.87
AP000648.3-201ENST00000623539 CRIPAKQ8N1N5 446 aa3.38□□□□□ -1.87
AP000648.3-201ENST00000623539 ANKLE1Q8NAG6 615 aa3.38□□□□□ -1.87
AP000648.3-201ENST00000623539 MORN1Q5T089 497 aa3.37□□□□□ -1.87
AP000648.3-201ENST00000623539 BRICD5Q6PL45 260 aa3.37□□□□□ -1.87
AP000648.3-201ENST00000623539 KCNC4Q03721 635 aa3.37□□□□□ -1.87
AP000648.3-201ENST00000623539 BANK1Q8NDB2 785 aa3.37□□□□□ -1.87
AP000648.3-201ENST00000623539 DDX12PQ92771 950 aa3.37□□□□□ -1.87
AP000648.3-201ENST00000623539 ADH1BP00325 375 aa3.36□□□□□ -1.87
AP000648.3-201ENST00000623539 PPP4CP60510 307 aa3.36□□□□□ -1.87
AP000648.3-201ENST00000623539 TRIM66O15016 1216 aa3.36□□□□□ -1.87
AP000648.3-201ENST00000623539 DXOO77932 396 aaKnown RBP3.36□□□□□ -1.87
AP000648.3-201ENST00000623539 ATP6V1AP38606 617 aa3.35□□□□□ -1.87
AP000648.3-201ENST00000623539 PROX2Q3B8N5 592 aa3.35□□□□□ -1.87
AP000648.3-201ENST00000623539 SH3D19Q5HYK7 790 aa3.35□□□□□ -1.87
AP000648.3-201ENST00000623539 RSPH6AQ9H0K4 717 aa3.35□□□□□ -1.87
AP000648.3-201ENST00000623539 GPSM3Q9Y4H4 160 aa3.35□□□□□ -1.87
AP000648.3-201ENST00000623539 C3orf80F5H4A9 247 aa3.35□□□□□ -1.87
AP000648.3-201ENST00000623539 GGCXP38435 758 aa3.34□□□□□ -1.87
AP000648.3-201ENST00000623539 ANKRD13DQ6ZTN6 518 aa3.34□□□□□ -1.87
AP000648.3-201ENST00000623539 PLA2G2EQ9NZK7 142 aa3.34□□□□□ -1.87
AP000648.3-201ENST00000623539 SWT1Q5T5J6 900 aaKnown RBP3.34□□□□□ -1.87
AP000648.3-201ENST00000623539 GRXCR2A6NFK2 248 aa3.34□□□□□ -1.87
AP000648.3-201ENST00000623539 GOLGA8CPA6NN73 597 aa3.34□□□□□ -1.87
AP000648.3-201ENST00000623539 ZPR1O75312 459 aa3.34□□□□□ -1.87
AP000648.3-201ENST00000623539 AVPP01185 164 aa3.34□□□□□ -1.88
AP000648.3-201ENST00000623539 SLC10A3P09131 477 aa3.33□□□□□ -1.88
AP000648.3-201ENST00000623539 HPS5Q9UPZ3 1129 aa3.33□□□□□ -1.88
AP000648.3-201ENST00000623539 RBM26Q5T8P6 1007 aaKnown RBP3.33□□□□□ -1.88
AP000648.3-201ENST00000623539 DGAT1O75907 488 aa3.33□□□□□ -1.88
AP000648.3-201ENST00000623539 SAMD7Q7Z3H4 446 aa3.33□□□□□ -1.88
AP000648.3-201ENST00000623539 NRG2O14511 850 aaPredicted RBP3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 FMNL1O95466 1100 aaPredicted RBP3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 ZNF592Q92610 1267 aa3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 CCDC102AQ96A19 550 aa3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 WNT7BP56706 349 aa3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 SKIV2LQ15477 1246 aaKnown RBP3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 TRMT44Q8IYL2 757 aaKnown RBP3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 DDRGK1Q96HY6 314 aa3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.32□□□□□ -1.88
AP000648.3-201ENST00000623539 JUNDP17535 347 aa3.31□□□□□ -1.88
AP000648.3-201ENST00000623539 APLP1P51693 650 aa3.31□□□□□ -1.88
AP000648.3-201ENST00000623539 LILRB3O75022 631 aa3.31□□□□□ -1.88
AP000648.3-201ENST00000623539 AXIN2Q9Y2T1 843 aa3.31□□□□□ -1.88
AP000648.3-201ENST00000623539 PTPRNQ16849 979 aa3.31□□□□□ -1.88
AP000648.3-201ENST00000623539 HOXA2O43364 376 aa3.31□□□□□ -1.88
AP000648.3-201ENST00000623539 ARMC2Q8NEN0 867 aa3.31□□□□□ -1.88
AP000648.3-201ENST00000623539 PHOX2BQ99453 314 aa3.3□□□□□ -1.88
AP000648.3-201ENST00000623539 LYPD8Q6UX82 237 aa3.3□□□□□ -1.88
AP000648.3-201ENST00000623539 RETREG3Q86VR2 466 aa3.3□□□□□ -1.88
AP000648.3-201ENST00000623539 RBM33Q96EV2 1170 aaKnown RBP3.3□□□□□ -1.88
AP000648.3-201ENST00000623539 MAP4K5Q9Y4K4 846 aa3.3□□□□□ -1.88
AP000648.3-201ENST00000623539 MTRQ99707 1265 aa3.3□□□□□ -1.88
AP000648.3-201ENST00000623539 CDV3Q9UKY7 258 aaKnown RBP3.3□□□□□ -1.88
AP000648.3-201ENST00000623539 RSBN1LQ6PCB5 846 aaPredicted RBP3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 SPIRE2Q8WWL2 714 aa3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 C1QTNF2Q9BXJ5 285 aa3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 NUTM2FA1L443 756 aa3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 TMEM259Q4ZIN3 620 aa3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 ZNF598Q86UK7 904 aaKnown RBP3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 F12P00748 615 aaPredicted RBP3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 PDE4DQ08499 809 aa3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 CTC1Q2NKJ3 1217 aa3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 WBP1LQ9NX94 342 aa3.29□□□□□ -1.88
AP000648.3-201ENST00000623539 KDM4AO75164 1064 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms