RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 ASXL1Q8IXJ9 1541 aa8.75□□□□□ -1.01
EBF1-211ENST00000622875 TROQ12816 1431 aaPredicted RBP8.75□□□□□ -1.01
EBF1-211ENST00000622875 GLI3P10071 1580 aa8.74□□□□□ -1.01
EBF1-211ENST00000622875 PNPLA6Q8IY17 1366 aa8.74□□□□□ -1.01
EBF1-211ENST00000622875 FNBP4Q8N3X1 1017 aaPredicted RBP8.74□□□□□ -1.01
EBF1-211ENST00000622875 ERVK-7P63135 1459 aa8.73□□□□□ -1.01
EBF1-211ENST00000622875 SHANK3Q9BYB0 1731 aa8.73□□□□□ -1.01
EBF1-211ENST00000622875 KIAA1107Q9UPP5 1409 aa8.72□□□□□ -1.01
EBF1-211ENST00000622875 CROCC2H7BZ55 1655 aa8.72□□□□□ -1.01
EBF1-211ENST00000622875 DCCP43146 1447 aa8.72□□□□□ -1.01
EBF1-211ENST00000622875 MYT1LQ9UL68 1186 aa8.72□□□□□ -1.01
EBF1-211ENST00000622875 SYCP2Q9BX26 1530 aa8.72□□□□□ -1.01
EBF1-211ENST00000622875 DEFB132Q7Z7B7 95 aa8.72□□□□□ -1.01
EBF1-211ENST00000622875 NUP188Q5SRE5 1749 aa8.71□□□□□ -1.01
EBF1-211ENST00000622875 PSDA5PKW4 1024 aaPredicted RBP8.71□□□□□ -1.01
EBF1-211ENST00000622875 FBXO31Q5XUX0 539 aaPredicted RBP8.71□□□□□ -1.02
EBF1-211ENST00000622875 PLEKHH2Q8IVE3 1493 aa8.7□□□□□ -1.02
EBF1-211ENST00000622875 CLIP1P30622 1438 aa8.7□□□□□ -1.02
EBF1-211ENST00000622875 LRRIQ1Q96JM4 1722 aa8.69□□□□□ -1.02
EBF1-211ENST00000622875 C8orf37Q96NL8 207 aa8.69□□□□□ -1.02
EBF1-211ENST00000622875 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
EBF1-211ENST00000622875 ADGRB2O60241 1585 aa8.69□□□□□ -1.02
EBF1-211ENST00000622875 GIGYF1O75420 1035 aaPredicted RBP8.68□□□□□ -1.02
EBF1-211ENST00000622875 SF3B2Q13435 895 aaKnown RBP8.68□□□□□ -1.02
EBF1-211ENST00000622875 PTPN23Q9H3S7 1636 aa8.68□□□□□ -1.02
EBF1-211ENST00000622875 CASZ1Q86V15 1759 aa8.68□□□□□ -1.02
EBF1-211ENST00000622875 SPAG9O60271 1321 aaKnown RBP8.68□□□□□ -1.02
EBF1-211ENST00000622875 LTKP29376 864 aa8.68□□□□□ -1.02
EBF1-211ENST00000622875 PIK3C2BO00750 1634 aa8.67□□□□□ -1.02
EBF1-211ENST00000622875 USP21Q9UK80 565 aa8.67□□□□□ -1.02
EBF1-211ENST00000622875 ADGRB3O60242 1522 aa8.67□□□□□ -1.02
EBF1-211ENST00000622875 CENPBP07199 599 aaPredicted RBP8.66□□□□□ -1.02
EBF1-211ENST00000622875 DHX29Q7Z478 1369 aaKnown RBP8.66□□□□□ -1.02
EBF1-211ENST00000622875 BAG6P46379 1132 aa8.66□□□□□ -1.02
EBF1-211ENST00000622875 PARD3Q8TEW0 1356 aa8.65□□□□□ -1.02
EBF1-211ENST00000622875 GGT6Q6P531 493 aa8.65□□□□□ -1.02
EBF1-211ENST00000622875 LRRC59Q96AG4 307 aaKnown RBP8.65□□□□□ -1.02
EBF1-211ENST00000622875 P3H3Q8IVL6 736 aa8.64□□□□□ -1.03
EBF1-211ENST00000622875 EIF2AK4Q9P2K8 1649 aaKnown RBP8.64□□□□□ -1.03
EBF1-211ENST00000622875 TMEM2Q9UHN6 1383 aa8.64□□□□□ -1.03
EBF1-211ENST00000622875 NWD2Q9ULI1 1742 aa8.64□□□□□ -1.03
EBF1-211ENST00000622875 BRINP3Q76B58 766 aa8.64□□□□□ -1.03
EBF1-211ENST00000622875 CADPS2Q86UW7 1296 aa8.64□□□□□ -1.03
EBF1-211ENST00000622875 NEXMIFQ5QGS0 1516 aa8.63□□□□□ -1.03
EBF1-211ENST00000622875 RGPD3A6NKT7 1758 aaPredicted RBP8.63□□□□□ -1.03
EBF1-211ENST00000622875 RGPD4Q7Z3J3 1758 aa8.63□□□□□ -1.03
EBF1-211ENST00000622875 MYOM2P54296 1465 aa8.63□□□□□ -1.03
EBF1-211ENST00000622875 MYOM1P52179 1685 aa8.62□□□□□ -1.03
EBF1-211ENST00000622875 R3HDM1Q15032 1099 aaKnown RBP8.62□□□□□ -1.03
EBF1-211ENST00000622875 NRKQ7Z2Y5 1582 aa8.62□□□□□ -1.03
EBF1-211ENST00000622875 TXNDC2Q86VQ3 553 aa8.62□□□□□ -1.03
EBF1-211ENST00000622875 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
EBF1-211ENST00000622875 TMEM131LA2VDJ0 1609 aa8.62□□□□□ -1.03
EBF1-211ENST00000622875 HSPA6P17066 643 aa8.61□□□□□ -1.03
EBF1-211ENST00000622875 EFCAB6Q5THR3 1501 aa8.61□□□□□ -1.03
EBF1-211ENST00000622875 CDK11AQ9UQ88 783 aaPredicted RBP8.61□□□□□ -1.03
EBF1-211ENST00000622875 DLC1Q96QB1 1528 aa8.6□□□□□ -1.03
EBF1-211ENST00000622875 EID1Q9Y6B2 187 aa8.6□□□□□ -1.03
EBF1-211ENST00000622875 MST1RQ04912 1400 aa8.6□□□□□ -1.03
EBF1-211ENST00000622875 ONECUT3O60422 494 aaPredicted RBP8.6□□□□□ -1.03
EBF1-211ENST00000622875 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
EBF1-211ENST00000622875 AATKQ6ZMQ8 1374 aa8.6□□□□□ -1.03
EBF1-211ENST00000622875 SLIT2O94813 1529 aa8.6□□□□□ -1.03
EBF1-211ENST00000622875 CEP152O94986 1710 aa8.59□□□□□ -1.03
EBF1-211ENST00000622875 CEP350Q5VT06 3117 aa8.58□□□□□ -1.04
EBF1-211ENST00000622875 KIAA1210Q9ULL0 1709 aa8.58□□□□□ -1.04
EBF1-211ENST00000622875 RPRD2Q5VT52 1461 aaKnown RBP8.58□□□□□ -1.04
EBF1-211ENST00000622875 EIF5BO60841 1220 aaKnown RBP8.57□□□□□ -1.04
EBF1-211ENST00000622875 C19orf44Q9H6X5 657 aa8.57□□□□□ -1.04
EBF1-211ENST00000622875 SPON1Q9HCB6 807 aa8.57□□□□□ -1.04
EBF1-211ENST00000622875 PIK3R4Q99570 1358 aa8.57□□□□□ -1.04
EBF1-211ENST00000622875 NALCNQ8IZF0 1738 aa8.57□□□□□ -1.04
EBF1-211ENST00000622875 XRN1Q8IZH2 1706 aaKnown RBP8.57□□□□□ -1.04
EBF1-211ENST00000622875 KCNQ2O43526 872 aa8.56□□□□□ -1.04
EBF1-211ENST00000622875 USP32Q8NFA0 1604 aa8.56□□□□□ -1.04
EBF1-211ENST00000622875 PLCH1Q4KWH8 1693 aa8.56□□□□□ -1.04
EBF1-211ENST00000622875 MAP3K5Q99683 1374 aa8.56□□□□□ -1.04
EBF1-211ENST00000622875 EHBP1L1Q8N3D4 1523 aa8.55□□□□□ -1.04
EBF1-211ENST00000622875 FMN1Q68DA7 1419 aa8.55□□□□□ -1.04
EBF1-211ENST00000622875 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
EBF1-211ENST00000622875 WDR90Q96KV7 1748 aa8.55□□□□□ -1.04
EBF1-211ENST00000622875 WASHC2CQ9Y4E1 1318 aa8.55□□□□□ -1.04
EBF1-211ENST00000622875 THSD7AQ9UPZ6 1657 aa8.54□□□□□ -1.04
EBF1-211ENST00000622875 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
EBF1-211ENST00000622875 TRPM2O94759 1503 aa8.54□□□□□ -1.04
EBF1-211ENST00000622875 MBD5Q9P267 1494 aa8.54□□□□□ -1.04
EBF1-211ENST00000622875 PLEKHG1Q9ULL1 1385 aa8.53□□□□□ -1.04
EBF1-211ENST00000622875 NRAPQ86VF7 1730 aa8.53□□□□□ -1.04
EBF1-211ENST00000622875 PPP1R1BQ9UD71 204 aaPredicted RBP8.53□□□□□ -1.04
EBF1-211ENST00000622875 ATF3P18847 181 aa8.53□□□□□ -1.04
EBF1-211ENST00000622875 COL24A1Q17RW2 1714 aa8.52□□□□□ -1.05
EBF1-211ENST00000622875 CAMKK2Q96RR4 588 aa8.52□□□□□ -1.05
EBF1-211ENST00000622875 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
EBF1-211ENST00000622875 CAPN15O75808 1086 aa8.52□□□□□ -1.05
EBF1-211ENST00000622875 DNAJC5GQ8N7S2 189 aa8.52□□□□□ -1.05
EBF1-211ENST00000622875 CCDC18Q5T9S5 1454 aa8.52□□□□□ -1.05
EBF1-211ENST00000622875 TNS2Q63HR2 1409 aa8.51□□□□□ -1.05
EBF1-211ENST00000622875 KRT27Q7Z3Y8 459 aa8.51□□□□□ -1.05
EBF1-211ENST00000622875 ZFYVE9O95405 1425 aa8.51□□□□□ -1.05
EBF1-211ENST00000622875 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms