RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 NOS1P29475 1434 aa23.78■■□□□ 1.4
ZNF48-206ENST00000622647 SMG6Q86US8 1419 aaKnown RBP23.78■■□□□ 1.4
ZNF48-206ENST00000622647 TRAK1Q9UPV9 953 aa23.78■■□□□ 1.4
ZNF48-206ENST00000622647 PPP4R2Q9NY27 417 aa23.77■■□□□ 1.4
ZNF48-206ENST00000622647 IQGAP1P46940 1657 aa23.77■■□□□ 1.4
ZNF48-206ENST00000622647 MLH3Q9UHC1 1453 aa23.76■■□□□ 1.39
ZNF48-206ENST00000622647 STAC3Q96MF2 364 aa23.76■■□□□ 1.39
ZNF48-206ENST00000622647 MROH2AA6NES4 1674 aa23.75■■□□□ 1.39
ZNF48-206ENST00000622647 HECW2Q9P2P5 1572 aa23.75■■□□□ 1.39
ZNF48-206ENST00000622647 ABCA6Q8N139 1617 aa23.75■■□□□ 1.39
ZNF48-206ENST00000622647 KIF1BO60333 1816 aa23.75■■□□□ 1.39
ZNF48-206ENST00000622647 FAM69CQ0P6D2 419 aa23.73■■□□□ 1.39
ZNF48-206ENST00000622647 CDCA7LQ96GN5 454 aa23.73■■□□□ 1.39
ZNF48-206ENST00000622647 CDCA8Q53HL2 280 aa23.72■■□□□ 1.39
ZNF48-206ENST00000622647 EIF3AQ14152 1382 aaKnown RBP23.72■■□□□ 1.39
ZNF48-206ENST00000622647 YEATS2Q9ULM3 1422 aa23.71■■□□□ 1.39
ZNF48-206ENST00000622647 CFAP74Q9C0B2 1584 aa23.71■■□□□ 1.39
ZNF48-206ENST00000622647 MAP3K4Q9Y6R4 1608 aa23.71■■□□□ 1.39
ZNF48-206ENST00000622647 AMER1Q5JTC6 1135 aaPredicted RBP23.71■■□□□ 1.39
ZNF48-206ENST00000622647 PPP2R1AP30153 589 aa23.7■■□□□ 1.38
ZNF48-206ENST00000622647 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
ZNF48-206ENST00000622647 RBM19Q9Y4C8 960 aaKnown RBP23.69■■□□□ 1.38
ZNF48-206ENST00000622647 LMTK2Q8IWU2 1503 aa23.67■■□□□ 1.38
ZNF48-206ENST00000622647 NEO1Q92859 1461 aa23.66■■□□□ 1.38
ZNF48-206ENST00000622647 ABCC3O15438 1527 aa23.66■■□□□ 1.38
ZNF48-206ENST00000622647 MYOM2P54296 1465 aa23.65■■□□□ 1.38
ZNF48-206ENST00000622647 SAFB2Q14151 953 aaKnown RBP eCLIP23.65■■□□□ 1.38
ZNF48-206ENST00000622647 IDI1Q13907 227 aa23.64■■□□□ 1.38
ZNF48-206ENST00000622647 ERICH6BQ5W0A0 696 aa23.64■■□□□ 1.38
ZNF48-206ENST00000622647 CARD14Q9BXL6 1004 aa23.64■■□□□ 1.38
ZNF48-206ENST00000622647 CENPJQ9HC77 1338 aaPredicted RBP23.63■■□□□ 1.37
ZNF48-206ENST00000622647 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
ZNF48-206ENST00000622647 ADGRB3O60242 1522 aa23.62■■□□□ 1.37
ZNF48-206ENST00000622647 DIP2CQ9Y2E4 1556 aa23.62■■□□□ 1.37
ZNF48-206ENST00000622647 C14orf93Q9H972 538 aaKnown RBP23.62■■□□□ 1.37
ZNF48-206ENST00000622647 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
ZNF48-206ENST00000622647 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.37
ZNF48-206ENST00000622647 TNNT2P45379 298 aaPredicted RBP23.6■■□□□ 1.37
ZNF48-206ENST00000622647 STK26Q9P289 416 aa23.6■■□□□ 1.37
ZNF48-206ENST00000622647 SLC12A5Q9H2X9 1139 aa23.59■■□□□ 1.37
ZNF48-206ENST00000622647 SIGLEC1Q9BZZ2 1709 aa23.59■■□□□ 1.37
ZNF48-206ENST00000622647 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
ZNF48-206ENST00000622647 MLECQ14165 292 aa23.59■■□□□ 1.37
ZNF48-206ENST00000622647 CCDC146Q8IYE0 955 aa23.59■■□□□ 1.37
ZNF48-206ENST00000622647 RCAN3Q9UKA8 241 aa23.58■■□□□ 1.37
ZNF48-206ENST00000622647 KIAA1210Q9ULL0 1709 aa23.58■■□□□ 1.37
ZNF48-206ENST00000622647 TSPOAP1O95153 1857 aa23.57■■□□□ 1.36
ZNF48-206ENST00000622647 SYNMO15061 1565 aa23.57■■□□□ 1.36
ZNF48-206ENST00000622647 RNF123Q5XPI4 1314 aa23.57■■□□□ 1.36
ZNF48-206ENST00000622647 MYOM1P52179 1685 aa23.56■■□□□ 1.36
ZNF48-206ENST00000622647 CAMSAP1Q5T5Y3 1602 aa23.56■■□□□ 1.36
ZNF48-206ENST00000622647 CCDC136Q96JN2 1154 aa23.56■■□□□ 1.36
ZNF48-206ENST00000622647 ASXL1Q8IXJ9 1541 aa23.56■■□□□ 1.36
ZNF48-206ENST00000622647 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
ZNF48-206ENST00000622647 KDM5AP29375 1690 aaKnown RBP23.55■■□□□ 1.36
ZNF48-206ENST00000622647 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
ZNF48-206ENST00000622647 NEURL4Q96JN8 1562 aa23.55■■□□□ 1.36
ZNF48-206ENST00000622647 RICTORQ6R327 1708 aa23.55■■□□□ 1.36
ZNF48-206ENST00000622647 PLIN1O60240 522 aa23.55■■□□□ 1.36
ZNF48-206ENST00000622647 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
ZNF48-206ENST00000622647 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
ZNF48-206ENST00000622647 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
ZNF48-206ENST00000622647 VGFO15240 615 aaPredicted RBP23.53■■□□□ 1.36
ZNF48-206ENST00000622647 RRP1P56182 461 aaKnown RBP23.53■■□□□ 1.36
ZNF48-206ENST00000622647 PPLO60437 1756 aa23.52■■□□□ 1.36
ZNF48-206ENST00000622647 EXOC6Q8TAG9 804 aa23.51■■□□□ 1.35
ZNF48-206ENST00000622647 BLMP54132 1417 aaPredicted RBP23.51■■□□□ 1.35
ZNF48-206ENST00000622647 RPGRIP1LQ68CZ1 1315 aa23.51■■□□□ 1.35
ZNF48-206ENST00000622647 PDE3BQ13370 1112 aa23.49■■□□□ 1.35
ZNF48-206ENST00000622647 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
ZNF48-206ENST00000622647 STAG3Q9UJ98 1225 aa23.48■■□□□ 1.35
ZNF48-206ENST00000622647 PLEKHH1Q9ULM0 1364 aa23.47■■□□□ 1.35
ZNF48-206ENST00000622647 SLC24A1O60721 1099 aa23.46■■□□□ 1.35
ZNF48-206ENST00000622647 ADGRB1O14514 1584 aa23.46■■□□□ 1.35
ZNF48-206ENST00000622647 NSD3Q9BZ95 1437 aa23.45■■□□□ 1.34
ZNF48-206ENST00000622647 MORC1Q86VD1 984 aa23.45■■□□□ 1.34
ZNF48-206ENST00000622647 APAF1O14727 1248 aa23.44■■□□□ 1.34
ZNF48-206ENST00000622647 SLC52A1Q9NWF4 448 aa23.44■■□□□ 1.34
ZNF48-206ENST00000622647 NEXMIFQ5QGS0 1516 aa23.42■■□□□ 1.34
ZNF48-206ENST00000622647 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
ZNF48-206ENST00000622647 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
ZNF48-206ENST00000622647 MINK1Q8N4C8 1332 aaPredicted RBP23.41■■□□□ 1.34
ZNF48-206ENST00000622647 SBNO2Q9Y2G9 1366 aa23.4■■□□□ 1.34
ZNF48-206ENST00000622647 DIP2BQ9P265 1576 aa23.39■■□□□ 1.34
ZNF48-206ENST00000622647 NPC1L1Q9UHC9 1359 aa23.39■■□□□ 1.34
ZNF48-206ENST00000622647 SRPK2P78362 688 aaKnown RBP23.39■■□□□ 1.34
ZNF48-206ENST00000622647 MYO5BQ9ULV0 1848 aa23.39■■□□□ 1.34
ZNF48-206ENST00000622647 PIK3C2BO00750 1634 aa23.39■■□□□ 1.34
ZNF48-206ENST00000622647 ARHGAP31Q2M1Z3 1444 aa23.39■■□□□ 1.33
ZNF48-206ENST00000622647 ZMYM4Q5VZL5 1548 aa23.38■■□□□ 1.33
ZNF48-206ENST00000622647 GLI2P10070 1586 aa23.38■■□□□ 1.33
ZNF48-206ENST00000622647 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
ZNF48-206ENST00000622647 NEUROD2Q15784 382 aa23.37■■□□□ 1.33
ZNF48-206ENST00000622647 MYO3AQ8NEV4 1616 aa23.37■■□□□ 1.33
ZNF48-206ENST00000622647 SPINK5Q9NQ38 1064 aaPredicted RBP23.37■■□□□ 1.33
ZNF48-206ENST00000622647 PRAM1Q96QH2 718 aa23.36■■□□□ 1.33
ZNF48-206ENST00000622647 C20orf194Q5TEA3 1177 aa23.36■■□□□ 1.33
ZNF48-206ENST00000622647 POGKQ9P215 609 aa23.36■■□□□ 1.33
ZNF48-206ENST00000622647 GOLGA2Q08379 1002 aa23.36■■□□□ 1.33
ZNF48-206ENST00000622647 DUSP27Q5VZP5 1158 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms