RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 DUOX2Q9NRD8 1548 aa16.25■□□□□ 0.19
LITAF-221ENST00000622633 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
LITAF-221ENST00000622633 ABCC2Q92887 1545 aa16.25■□□□□ 0.19
LITAF-221ENST00000622633 PLXNC1O60486 1568 aa16.24■□□□□ 0.19
LITAF-221ENST00000622633 RGS3P49796 1198 aa16.24■□□□□ 0.19
LITAF-221ENST00000622633 NAP1L5Q96NT1 182 aaPredicted RBP16.24■□□□□ 0.19
LITAF-221ENST00000622633 PLCH2O75038 1416 aa16.23■□□□□ 0.19
LITAF-221ENST00000622633 MYO5CQ9NQX4 1742 aa16.23■□□□□ 0.19
LITAF-221ENST00000622633 ATP10AO60312 1499 aa16.23■□□□□ 0.19
LITAF-221ENST00000622633 SHROOM2Q13796 1616 aa16.22■□□□□ 0.19
LITAF-221ENST00000622633 NFKBIBQ15653 356 aa16.22■□□□□ 0.19
LITAF-221ENST00000622633 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
LITAF-221ENST00000622633 LAMC1P11047 1609 aa16.21■□□□□ 0.19
LITAF-221ENST00000622633 PLIN1O60240 522 aa16.2■□□□□ 0.18
LITAF-221ENST00000622633 MAGI2Q86UL8 1455 aa16.2■□□□□ 0.18
LITAF-221ENST00000622633 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
LITAF-221ENST00000622633 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
LITAF-221ENST00000622633 NAP1L2Q9ULW6 460 aaPredicted RBP16.19■□□□□ 0.18
LITAF-221ENST00000622633 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
LITAF-221ENST00000622633 CENPJQ9HC77 1338 aaPredicted RBP16.19■□□□□ 0.18
LITAF-221ENST00000622633 ADAMTS8Q9UP79 889 aa16.18■□□□□ 0.18
LITAF-221ENST00000622633 BLMP54132 1417 aaPredicted RBP16.18■□□□□ 0.18
LITAF-221ENST00000622633 SPAG9O60271 1321 aaKnown RBP16.18■□□□□ 0.18
LITAF-221ENST00000622633 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
LITAF-221ENST00000622633 KNSTRNQ9Y448 316 aa16.17■□□□□ 0.18
LITAF-221ENST00000622633 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
LITAF-221ENST00000622633 INSRP06213 1382 aa16.15■□□□□ 0.18
LITAF-221ENST00000622633 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.18
LITAF-221ENST00000622633 PPP2R1AP30153 589 aa16.14■□□□□ 0.18
LITAF-221ENST00000622633 PAXIP1Q6ZW49 1069 aaPredicted RBP16.14■□□□□ 0.18
LITAF-221ENST00000622633 ABCC1P33527 1531 aa16.14■□□□□ 0.17
LITAF-221ENST00000622633 WDR7Q9Y4E6 1490 aa16.14■□□□□ 0.17
LITAF-221ENST00000622633 CRBNQ96SW2 442 aa16.13■□□□□ 0.17
LITAF-221ENST00000622633 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
LITAF-221ENST00000622633 ZCCHC11Q5TAX3 1644 aaKnown RBP16.13■□□□□ 0.17
LITAF-221ENST00000622633 AMER1Q5JTC6 1135 aaPredicted RBP16.12■□□□□ 0.17
LITAF-221ENST00000622633 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
LITAF-221ENST00000622633 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
LITAF-221ENST00000622633 PDE4AP27815 886 aa16.11■□□□□ 0.17
LITAF-221ENST00000622633 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
LITAF-221ENST00000622633 PDCL3Q9H2J4 239 aa16.1■□□□□ 0.17
LITAF-221ENST00000622633 ZMYM4Q5VZL5 1548 aa16.1■□□□□ 0.17
LITAF-221ENST00000622633 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
LITAF-221ENST00000622633 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
LITAF-221ENST00000622633 MADDQ8WXG6 1647 aa16.1■□□□□ 0.17
LITAF-221ENST00000622633 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
LITAF-221ENST00000622633 UHRF1BP1LA0JNW5 1464 aa16.08■□□□□ 0.17
LITAF-221ENST00000622633 SCAF11Q99590 1463 aaKnown RBP16.08■□□□□ 0.17
LITAF-221ENST00000622633 PLEKHH1Q9ULM0 1364 aa16.08■□□□□ 0.17
LITAF-221ENST00000622633 CLCN1P35523 988 aa16.08■□□□□ 0.17
LITAF-221ENST00000622633 PTPRTO14522 1441 aa16.08■□□□□ 0.16
LITAF-221ENST00000622633 RTEL1-TNFRSF6BF6WH68 1400 aa16.08■□□□□ 0.16
LITAF-221ENST00000622633 TRPM2O94759 1503 aa16.07■□□□□ 0.16
LITAF-221ENST00000622633 KIF3BO15066 747 aa16.07■□□□□ 0.16
LITAF-221ENST00000622633 BACH2Q9BYV9 841 aa16.07■□□□□ 0.16
LITAF-221ENST00000622633 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
LITAF-221ENST00000622633 STAC3Q96MF2 364 aa16.07■□□□□ 0.16
LITAF-221ENST00000622633 MS4A1P11836 297 aa16.06■□□□□ 0.16
LITAF-221ENST00000622633 SCAPERQ9BY12 1400 aa16.06■□□□□ 0.16
LITAF-221ENST00000622633 DUSP27Q5VZP5 1158 aa16.06■□□□□ 0.16
LITAF-221ENST00000622633 IQGAP1P46940 1657 aa16.05■□□□□ 0.16
LITAF-221ENST00000622633 ZFYVE16Q7Z3T8 1539 aa16.05■□□□□ 0.16
LITAF-221ENST00000622633 CLTCL1P53675 1640 aa16.05■□□□□ 0.16
LITAF-221ENST00000622633 CFAP70Q5T0N1 1121 aa16.05■□□□□ 0.16
LITAF-221ENST00000622633 CCDC146Q8IYE0 955 aa16.04■□□□□ 0.16
LITAF-221ENST00000622633 KANK1Q14678 1352 aa16.04■□□□□ 0.16
LITAF-221ENST00000622633 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
LITAF-221ENST00000622633 IPO4Q8TEX9 1081 aaKnown RBP16.03■□□□□ 0.16
LITAF-221ENST00000622633 ASXL1Q8IXJ9 1541 aa16.03■□□□□ 0.16
LITAF-221ENST00000622633 ZNF521Q96K83 1311 aa16.03■□□□□ 0.16
LITAF-221ENST00000622633 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.16
LITAF-221ENST00000622633 SPHKAPQ2M3C7 1700 aa16.02■□□□□ 0.15
LITAF-221ENST00000622633 ADGRF5Q8IZF2 1346 aa16.01■□□□□ 0.15
LITAF-221ENST00000622633 SYNMO15061 1565 aa16.01■□□□□ 0.15
LITAF-221ENST00000622633 CEP152O94986 1710 aa16.01■□□□□ 0.15
LITAF-221ENST00000622633 EIF3AQ14152 1382 aaKnown RBP16.01■□□□□ 0.15
LITAF-221ENST00000622633 SLFN5Q08AF3 891 aa16■□□□□ 0.15
LITAF-221ENST00000622633 FANCAO15360 1455 aa15.99■□□□□ 0.15
LITAF-221ENST00000622633 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
LITAF-221ENST00000622633 PIK3C2GO75747 1445 aa15.99■□□□□ 0.15
LITAF-221ENST00000622633 APAF1O14727 1248 aa15.99■□□□□ 0.15
LITAF-221ENST00000622633 FRAT2O75474 233 aaPredicted RBP15.99■□□□□ 0.15
LITAF-221ENST00000622633 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
LITAF-221ENST00000622633 ARAP3Q8WWN8 1544 aa15.98■□□□□ 0.15
LITAF-221ENST00000622633 TET3O43151 1660 aa15.98■□□□□ 0.15
LITAF-221ENST00000622633 ATP7AQ04656 1500 aa15.98■□□□□ 0.15
LITAF-221ENST00000622633 NPC1L1Q9UHC9 1359 aa15.98■□□□□ 0.15
LITAF-221ENST00000622633 DEPDC5O75140 1603 aa15.98■□□□□ 0.15
LITAF-221ENST00000622633 ARXQ96QS3 562 aa15.97■□□□□ 0.15
LITAF-221ENST00000622633 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
LITAF-221ENST00000622633 UGGT1Q9NYU2 1555 aa15.97■□□□□ 0.15
LITAF-221ENST00000622633 KDM2BQ8NHM5 1336 aa15.97■□□□□ 0.15
LITAF-221ENST00000622633 DDRGK1Q96HY6 314 aa15.96■□□□□ 0.15
LITAF-221ENST00000622633 VWDEQ8N2E2 1590 aa15.95■□□□□ 0.14
LITAF-221ENST00000622633 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
LITAF-221ENST00000622633 MYOM1P52179 1685 aa15.94■□□□□ 0.14
LITAF-221ENST00000622633 TRMT2AQ8IZ69 625 aaKnown RBP15.94■□□□□ 0.14
LITAF-221ENST00000622633 ADGRL1O94910 1474 aa15.94■□□□□ 0.14
LITAF-221ENST00000622633 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
LITAF-221ENST00000622633 CHGAP10645 457 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms