RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
AGAP3-226ENST00000622464 MLECQ14165 292 aa17.65■□□□□ 0.42
AGAP3-226ENST00000622464 SAFB2Q14151 953 aaKnown RBP eCLIP17.64■□□□□ 0.41
AGAP3-226ENST00000622464 TSPOAP1O95153 1857 aa17.63■□□□□ 0.41
AGAP3-226ENST00000622464 NLRP13Q86W25 1043 aa17.63■□□□□ 0.41
AGAP3-226ENST00000622464 SCAF11Q99590 1463 aaKnown RBP17.62■□□□□ 0.41
AGAP3-226ENST00000622464 PARD3Q8TEW0 1356 aa17.62■□□□□ 0.41
AGAP3-226ENST00000622464 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
AGAP3-226ENST00000622464 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
AGAP3-226ENST00000622464 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
AGAP3-226ENST00000622464 FBXO31Q5XUX0 539 aaPredicted RBP17.6■□□□□ 0.41
AGAP3-226ENST00000622464 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
AGAP3-226ENST00000622464 LAMC1P11047 1609 aa17.59■□□□□ 0.41
AGAP3-226ENST00000622464 IQGAP1P46940 1657 aa17.59■□□□□ 0.41
AGAP3-226ENST00000622464 KIF1BO60333 1816 aa17.59■□□□□ 0.41
AGAP3-226ENST00000622464 RIMBP3CA6NJZ7 1639 aa17.59■□□□□ 0.41
AGAP3-226ENST00000622464 RIMBP3BA6NNM3 1639 aa17.59■□□□□ 0.41
AGAP3-226ENST00000622464 RIMBP3Q9UFD9 1639 aa17.59■□□□□ 0.41
AGAP3-226ENST00000622464 CDCA7LQ96GN5 454 aa17.58■□□□□ 0.4
AGAP3-226ENST00000622464 CFAP74Q9C0B2 1584 aa17.57■□□□□ 0.4
AGAP3-226ENST00000622464 ABCC3O15438 1527 aa17.57■□□□□ 0.4
AGAP3-226ENST00000622464 STK26Q9P289 416 aa17.57■□□□□ 0.4
AGAP3-226ENST00000622464 TNNT2P45379 298 aaPredicted RBP17.57■□□□□ 0.4
AGAP3-226ENST00000622464 IDI1Q13907 227 aa17.57■□□□□ 0.4
AGAP3-226ENST00000622464 NUDCQ9Y266 331 aa17.57■□□□□ 0.4
AGAP3-226ENST00000622464 MAP3K4Q9Y6R4 1608 aa17.57■□□□□ 0.4
AGAP3-226ENST00000622464 DIP2CQ9Y2E4 1556 aa17.57■□□□□ 0.4
AGAP3-226ENST00000622464 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
AGAP3-226ENST00000622464 NEO1Q92859 1461 aa17.55■□□□□ 0.4
AGAP3-226ENST00000622464 SIGLEC1Q9BZZ2 1709 aa17.55■□□□□ 0.4
AGAP3-226ENST00000622464 AMER1Q5JTC6 1135 aaPredicted RBP17.54■□□□□ 0.4
AGAP3-226ENST00000622464 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
AGAP3-226ENST00000622464 PPP2R1AP30153 589 aa17.53■□□□□ 0.4
AGAP3-226ENST00000622464 ADAMTS8Q9UP79 889 aa17.52■□□□□ 0.4
AGAP3-226ENST00000622464 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
AGAP3-226ENST00000622464 ADGRB3O60242 1522 aa17.52■□□□□ 0.39
AGAP3-226ENST00000622464 LMTK2Q8IWU2 1503 aa17.52■□□□□ 0.39
AGAP3-226ENST00000622464 RICTORQ6R327 1708 aa17.51■□□□□ 0.39
AGAP3-226ENST00000622464 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
AGAP3-226ENST00000622464 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
AGAP3-226ENST00000622464 ERVK-7P63135 1459 aa17.51■□□□□ 0.39
AGAP3-226ENST00000622464 CENPJQ9HC77 1338 aaPredicted RBP17.51■□□□□ 0.39
AGAP3-226ENST00000622464 SMG6Q86US8 1419 aaKnown RBP17.5■□□□□ 0.39
AGAP3-226ENST00000622464 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
AGAP3-226ENST00000622464 MYOM2P54296 1465 aa17.5■□□□□ 0.39
AGAP3-226ENST00000622464 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
AGAP3-226ENST00000622464 SYNMO15061 1565 aa17.49■□□□□ 0.39
AGAP3-226ENST00000622464 C14orf93Q9H972 538 aaKnown RBP17.48■□□□□ 0.39
AGAP3-226ENST00000622464 IFT172Q9UG01 1749 aa17.48■□□□□ 0.39
AGAP3-226ENST00000622464 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
AGAP3-226ENST00000622464 PRKCSHP14314 528 aaPredicted RBP17.47■□□□□ 0.39
AGAP3-226ENST00000622464 STAC3Q96MF2 364 aa17.47■□□□□ 0.39
AGAP3-226ENST00000622464 PPP4R2Q9NY27 417 aa17.47■□□□□ 0.39
AGAP3-226ENST00000622464 MYOM1P52179 1685 aa17.47■□□□□ 0.39
AGAP3-226ENST00000622464 PIK3C2GO75747 1445 aa17.46■□□□□ 0.39
AGAP3-226ENST00000622464 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
AGAP3-226ENST00000622464 CABP2Q9NPB3 220 aa17.46■□□□□ 0.39
AGAP3-226ENST00000622464 WDR43Q15061 677 aaKnown RBP eCLIP17.45■□□□□ 0.38
AGAP3-226ENST00000622464 PLIN1O60240 522 aa17.45■□□□□ 0.38
AGAP3-226ENST00000622464 DIP2BQ9P265 1576 aa17.45■□□□□ 0.38
AGAP3-226ENST00000622464 PPLO60437 1756 aa17.43■□□□□ 0.38
AGAP3-226ENST00000622464 KDM5AP29375 1690 aaKnown RBP17.43■□□□□ 0.38
AGAP3-226ENST00000622464 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
AGAP3-226ENST00000622464 ASXL1Q8IXJ9 1541 aa17.42■□□□□ 0.38
AGAP3-226ENST00000622464 MYO5BQ9ULV0 1848 aa17.42■□□□□ 0.38
AGAP3-226ENST00000622464 VGFO15240 615 aaPredicted RBP17.41■□□□□ 0.38
AGAP3-226ENST00000622464 RBM19Q9Y4C8 960 aaKnown RBP17.41■□□□□ 0.38
AGAP3-226ENST00000622464 MINK1Q8N4C8 1332 aaPredicted RBP17.41■□□□□ 0.38
AGAP3-226ENST00000622464 KIAA1210Q9ULL0 1709 aa17.4■□□□□ 0.38
AGAP3-226ENST00000622464 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
AGAP3-226ENST00000622464 NSD3Q9BZ95 1437 aa17.39■□□□□ 0.38
AGAP3-226ENST00000622464 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
AGAP3-226ENST00000622464 NEXMIFQ5QGS0 1516 aa17.38■□□□□ 0.37
AGAP3-226ENST00000622464 EXOC6Q8TAG9 804 aa17.38■□□□□ 0.37
AGAP3-226ENST00000622464 PLEKHH1Q9ULM0 1364 aa17.38■□□□□ 0.37
AGAP3-226ENST00000622464 PIK3C2BO00750 1634 aa17.38■□□□□ 0.37
AGAP3-226ENST00000622464 SRPK2P78362 688 aaKnown RBP17.37■□□□□ 0.37
AGAP3-226ENST00000622464 CCDC136Q96JN2 1154 aa17.36■□□□□ 0.37
AGAP3-226ENST00000622464 QRICH2Q9H0J4 1663 aa17.36■□□□□ 0.37
AGAP3-226ENST00000622464 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
AGAP3-226ENST00000622464 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
AGAP3-226ENST00000622464 NEURL4Q96JN8 1562 aa17.36■□□□□ 0.37
AGAP3-226ENST00000622464 RPGRIP1LQ68CZ1 1315 aa17.36■□□□□ 0.37
AGAP3-226ENST00000622464 GLI2P10070 1586 aa17.36■□□□□ 0.37
AGAP3-226ENST00000622464 APAF1O14727 1248 aa17.36■□□□□ 0.37
AGAP3-226ENST00000622464 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
AGAP3-226ENST00000622464 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
AGAP3-226ENST00000622464 SLC52A1Q9NWF4 448 aa17.35■□□□□ 0.37
AGAP3-226ENST00000622464 BLMP54132 1417 aaPredicted RBP17.35■□□□□ 0.37
AGAP3-226ENST00000622464 POGKQ9P215 609 aa17.34■□□□□ 0.37
AGAP3-226ENST00000622464 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
AGAP3-226ENST00000622464 PREX1Q8TCU6 1659 aa17.33■□□□□ 0.37
AGAP3-226ENST00000622464 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
AGAP3-226ENST00000622464 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
AGAP3-226ENST00000622464 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
AGAP3-226ENST00000622464 RNF123Q5XPI4 1314 aa17.32■□□□□ 0.36
AGAP3-226ENST00000622464 SKAP1Q86WV1 359 aa17.31■□□□□ 0.36
AGAP3-226ENST00000622464 ARHGAP31Q2M1Z3 1444 aa17.31■□□□□ 0.36
AGAP3-226ENST00000622464 SETBP1Q9Y6X0 1596 aa17.31■□□□□ 0.36
AGAP3-226ENST00000622464 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms