RNA–Protein interactions for RNA: ENST00000622445.4

CACNB1-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 5 BASIC

Gene CACNB1, Length 3,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-212ENST00000622445 TPRNQ4KMQ1 711 aa16.39■□□□□ 0.21
CACNB1-212ENST00000622445 KIAA0556O60303 1618 aa16.39■□□□□ 0.21
CACNB1-212ENST00000622445 HSP90AA1P07900 732 aaKnown RBP16.39■□□□□ 0.21
CACNB1-212ENST00000622445 TCP11L2Q8N4U5 519 aa16.39■□□□□ 0.21
CACNB1-212ENST00000622445 ITPRIPQ8IWB1 547 aa16.39■□□□□ 0.21
CACNB1-212ENST00000622445 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
CACNB1-212ENST00000622445 BECN1Q14457 450 aa16.38■□□□□ 0.21
CACNB1-212ENST00000622445 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
CACNB1-212ENST00000622445 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
CACNB1-212ENST00000622445 ARHGAP5Q13017 1502 aa16.37■□□□□ 0.21
CACNB1-212ENST00000622445 APBB1O00213 710 aa16.37■□□□□ 0.21
CACNB1-212ENST00000622445 RLBP1P12271 317 aa16.37■□□□□ 0.21
CACNB1-212ENST00000622445 FBLN1P23142 703 aa16.37■□□□□ 0.21
CACNB1-212ENST00000622445 MTHFSP49914 203 aa16.37■□□□□ 0.21
CACNB1-212ENST00000622445 E9PSI1 815 aa16.36■□□□□ 0.21
CACNB1-212ENST00000622445 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
CACNB1-212ENST00000622445 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
CACNB1-212ENST00000622445 PDZRN3Q9UPQ7 1066 aa16.35■□□□□ 0.21
CACNB1-212ENST00000622445 MBD5Q9P267 1494 aa16.35■□□□□ 0.21
CACNB1-212ENST00000622445 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
CACNB1-212ENST00000622445 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
CACNB1-212ENST00000622445 WWC1Q8IX03 1113 aa16.34■□□□□ 0.21
CACNB1-212ENST00000622445 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
CACNB1-212ENST00000622445 SRPK2P78362 688 aaKnown RBP16.33■□□□□ 0.21
CACNB1-212ENST00000622445 CABP2Q9NPB3 220 aa16.33■□□□□ 0.21
CACNB1-212ENST00000622445 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.21
CACNB1-212ENST00000622445 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.2
CACNB1-212ENST00000622445 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
CACNB1-212ENST00000622445 A2MP01023 1474 aa16.33■□□□□ 0.2
CACNB1-212ENST00000622445 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
CACNB1-212ENST00000622445 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
CACNB1-212ENST00000622445 SOX12O15370 315 aa16.32■□□□□ 0.2
CACNB1-212ENST00000622445 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
CACNB1-212ENST00000622445 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
CACNB1-212ENST00000622445 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
CACNB1-212ENST00000622445 C1orf115Q9H7X2 142 aa16.3■□□□□ 0.2
CACNB1-212ENST00000622445 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
CACNB1-212ENST00000622445 MAGI2Q86UL8 1455 aa16.29■□□□□ 0.2
CACNB1-212ENST00000622445 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
CACNB1-212ENST00000622445 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
CACNB1-212ENST00000622445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNB1-212ENST00000622445 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
CACNB1-212ENST00000622445 CCDC141Q6ZP82 1450 aa16.28■□□□□ 0.2
CACNB1-212ENST00000622445 RSPH4AQ5TD94 716 aa16.27■□□□□ 0.2
CACNB1-212ENST00000622445 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
CACNB1-212ENST00000622445 PLA2R1Q13018 1463 aa16.26■□□□□ 0.19
CACNB1-212ENST00000622445 SYNJ2O15056 1496 aa16.26■□□□□ 0.19
CACNB1-212ENST00000622445 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
CACNB1-212ENST00000622445 CGNL1Q0VF96 1302 aa16.26■□□□□ 0.19
CACNB1-212ENST00000622445 NCLP19338 710 aaKnown RBP16.26■□□□□ 0.19
CACNB1-212ENST00000622445 THUMPD2Q9BTF0 503 aaKnown RBP16.26■□□□□ 0.19
CACNB1-212ENST00000622445 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
CACNB1-212ENST00000622445 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
CACNB1-212ENST00000622445 MAPK8IP3Q9UPT6 1336 aa16.25■□□□□ 0.19
CACNB1-212ENST00000622445 RARSP54136 660 aaKnown RBP16.24■□□□□ 0.19
CACNB1-212ENST00000622445 RWDD1Q9H446 243 aaPredicted RBP16.24■□□□□ 0.19
CACNB1-212ENST00000622445 WASHC2CQ9Y4E1 1318 aa16.24■□□□□ 0.19
CACNB1-212ENST00000622445 ARID3AQ99856 593 aa16.23■□□□□ 0.19
CACNB1-212ENST00000622445 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
CACNB1-212ENST00000622445 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
CACNB1-212ENST00000622445 COL17A1Q9UMD9 1497 aaPredicted RBP16.23■□□□□ 0.19
CACNB1-212ENST00000622445 NUTM2FA1L443 756 aa16.23■□□□□ 0.19
CACNB1-212ENST00000622445 HMOX1P09601 288 aa16.23■□□□□ 0.19
CACNB1-212ENST00000622445 FOXD4L5Q5VV16 416 aaPredicted RBP16.22■□□□□ 0.19
CACNB1-212ENST00000622445 FOXD4L4Q8WXT5 416 aaPredicted RBP16.22■□□□□ 0.19
CACNB1-212ENST00000622445 RUNDC1Q96C34 613 aa16.22■□□□□ 0.19
CACNB1-212ENST00000622445 ADGRL2O95490 1459 aa16.21■□□□□ 0.19
CACNB1-212ENST00000622445 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
CACNB1-212ENST00000622445 CEP170Q5SW79 1584 aa16.21■□□□□ 0.19
CACNB1-212ENST00000622445 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
CACNB1-212ENST00000622445 DZIP1LQ8IYY4 767 aaKnown RBP16.2■□□□□ 0.18
CACNB1-212ENST00000622445 PMFBP1Q8TBY8 1022 aa16.2■□□□□ 0.18
CACNB1-212ENST00000622445 C22orf23Q9BZE7 217 aa16.2■□□□□ 0.18
CACNB1-212ENST00000622445 EIF4G3O43432 1585 aaKnown RBP16.19■□□□□ 0.18
CACNB1-212ENST00000622445 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
CACNB1-212ENST00000622445 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
CACNB1-212ENST00000622445 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
CACNB1-212ENST00000622445 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
CACNB1-212ENST00000622445 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
CACNB1-212ENST00000622445 ANKRD45Q5TZF3 282 aa16.18■□□□□ 0.18
CACNB1-212ENST00000622445 HSCBQ8IWL3 235 aa16.18■□□□□ 0.18
CACNB1-212ENST00000622445 NOB1Q9ULX3 412 aaKnown RBP16.18■□□□□ 0.18
CACNB1-212ENST00000622445 GOLGA6L3A6NEY3 463 aa16.18■□□□□ 0.18
CACNB1-212ENST00000622445 KANK1Q14678 1352 aa16.18■□□□□ 0.18
CACNB1-212ENST00000622445 RIPK4P57078 832 aa16.18■□□□□ 0.18
CACNB1-212ENST00000622445 MLECQ14165 292 aa16.18■□□□□ 0.18
CACNB1-212ENST00000622445 FOXD4L6Q3SYB3 417 aaPredicted RBP16.17■□□□□ 0.18
CACNB1-212ENST00000622445 FOXD4L3Q6VB84 417 aaPredicted RBP16.17■□□□□ 0.18
CACNB1-212ENST00000622445 EIF3AQ14152 1382 aaKnown RBP16.16■□□□□ 0.18
CACNB1-212ENST00000622445 PDE3AQ14432 1141 aa16.16■□□□□ 0.18
CACNB1-212ENST00000622445 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
CACNB1-212ENST00000622445 MYH16Q9H6N6 1097 aa16.16■□□□□ 0.18
CACNB1-212ENST00000622445 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
CACNB1-212ENST00000622445 ARHGEF12Q9NZN5 1544 aa16.16■□□□□ 0.18
CACNB1-212ENST00000622445 ITSN2Q9NZM3 1697 aa16.16■□□□□ 0.18
CACNB1-212ENST00000622445 NOL8Q76FK4 1167 aaKnown RBP16.15■□□□□ 0.18
CACNB1-212ENST00000622445 USP19O94966 1318 aa16.15■□□□□ 0.18
CACNB1-212ENST00000622445 ZMYM4Q5VZL5 1548 aa16.15■□□□□ 0.18
CACNB1-212ENST00000622445 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
CACNB1-212ENST00000622445 KDM5DQ9BY66 1539 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms