RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 TATDN2Q93075 761 aa12.29□□□□□ -0.44
RAB28P4-201ENST00000622233 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
RAB28P4-201ENST00000622233 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
RAB28P4-201ENST00000622233 KIAA1468Q9P260 1216 aa12.28□□□□□ -0.44
RAB28P4-201ENST00000622233 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
RAB28P4-201ENST00000622233 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.45
RAB28P4-201ENST00000622233 RCCD1A6NED2 376 aa12.27□□□□□ -0.45
RAB28P4-201ENST00000622233 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
RAB28P4-201ENST00000622233 CLCN1P35523 988 aa12.26□□□□□ -0.45
RAB28P4-201ENST00000622233 PACS2Q86VP3 889 aa12.26□□□□□ -0.45
RAB28P4-201ENST00000622233 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
RAB28P4-201ENST00000622233 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
RAB28P4-201ENST00000622233 NBPF26B4DH59 902 aa12.24□□□□□ -0.45
RAB28P4-201ENST00000622233 THOC2Q8NI27 1593 aaKnown RBP12.24□□□□□ -0.45
RAB28P4-201ENST00000622233 SSTR3P32745 418 aaPredicted RBP12.23□□□□□ -0.45
RAB28P4-201ENST00000622233 SEPT9Q9UHD8 586 aaPredicted RBP12.23□□□□□ -0.45
RAB28P4-201ENST00000622233 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
RAB28P4-201ENST00000622233 CFTRP13569 1480 aa12.22□□□□□ -0.45
RAB28P4-201ENST00000622233 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
RAB28P4-201ENST00000622233 VPS9D1Q9Y2B5 631 aa12.22□□□□□ -0.45
RAB28P4-201ENST00000622233 PBX2P40425 430 aa12.21□□□□□ -0.45
RAB28P4-201ENST00000622233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
RAB28P4-201ENST00000622233 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
RAB28P4-201ENST00000622233 GTF3C3Q9Y5Q9 886 aa12.2□□□□□ -0.46
RAB28P4-201ENST00000622233 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
RAB28P4-201ENST00000622233 RABGEF1Q9UJ41 708 aa12.19□□□□□ -0.46
RAB28P4-201ENST00000622233 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
RAB28P4-201ENST00000622233 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
RAB28P4-201ENST00000622233 CUX2O14529 1486 aa12.18□□□□□ -0.46
RAB28P4-201ENST00000622233 DNAJB2P25686 324 aa12.17□□□□□ -0.46
RAB28P4-201ENST00000622233 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
RAB28P4-201ENST00000622233 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
RAB28P4-201ENST00000622233 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
RAB28P4-201ENST00000622233 LSM11P83369 360 aaKnown RBP eCLIP12.14□□□□□ -0.47
RAB28P4-201ENST00000622233 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
RAB28P4-201ENST00000622233 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
RAB28P4-201ENST00000622233 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
RAB28P4-201ENST00000622233 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
RAB28P4-201ENST00000622233 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
RAB28P4-201ENST00000622233 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
RAB28P4-201ENST00000622233 WDR62O43379 1518 aa12.11□□□□□ -0.47
RAB28P4-201ENST00000622233 MRC2Q9UBG0 1479 aa12.11□□□□□ -0.47
RAB28P4-201ENST00000622233 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
RAB28P4-201ENST00000622233 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
RAB28P4-201ENST00000622233 CD46P15529 392 aa12.09□□□□□ -0.47
RAB28P4-201ENST00000622233 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
RAB28P4-201ENST00000622233 TK2O00142 265 aa12.08□□□□□ -0.48
RAB28P4-201ENST00000622233 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
RAB28P4-201ENST00000622233 HRO43593 1189 aa12.06□□□□□ -0.48
RAB28P4-201ENST00000622233 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
RAB28P4-201ENST00000622233 KRTAP3-3Q9BYR6 98 aa12.06□□□□□ -0.48
RAB28P4-201ENST00000622233 KRTAP3-2Q9BYR7 98 aa12.06□□□□□ -0.48
RAB28P4-201ENST00000622233 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
RAB28P4-201ENST00000622233 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
RAB28P4-201ENST00000622233 SLC10A3P09131 477 aa12.05□□□□□ -0.48
RAB28P4-201ENST00000622233 POLR3EQ9NVU0 708 aa12.05□□□□□ -0.48
RAB28P4-201ENST00000622233 SULF1Q8IWU6 871 aa12.04□□□□□ -0.48
RAB28P4-201ENST00000622233 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
RAB28P4-201ENST00000622233 SPIRE2Q8WWL2 714 aa12.04□□□□□ -0.48
RAB28P4-201ENST00000622233 ZFRQ96KR1 1074 aaKnown RBP12.04□□□□□ -0.48
RAB28P4-201ENST00000622233 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
RAB28P4-201ENST00000622233 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
RAB28P4-201ENST00000622233 SH3D19Q5HYK7 790 aa12.03□□□□□ -0.48
RAB28P4-201ENST00000622233 MYSM1Q5VVJ2 828 aa12.03□□□□□ -0.48
RAB28P4-201ENST00000622233 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
RAB28P4-201ENST00000622233 LAPTM4BQ86VI4 370 aa12.02□□□□□ -0.49
RAB28P4-201ENST00000622233 RNF40O75150 1001 aa12.01□□□□□ -0.49
RAB28P4-201ENST00000622233 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
RAB28P4-201ENST00000622233 SKIV2LQ15477 1246 aaKnown RBP11.99□□□□□ -0.49
RAB28P4-201ENST00000622233 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
RAB28P4-201ENST00000622233 GOPCQ9HD26 462 aa11.99□□□□□ -0.49
RAB28P4-201ENST00000622233 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
RAB28P4-201ENST00000622233 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
RAB28P4-201ENST00000622233 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
RAB28P4-201ENST00000622233 LIMD1Q9UGP4 676 aa11.98□□□□□ -0.49
RAB28P4-201ENST00000622233 DNMBPQ6XZF7 1577 aa11.97□□□□□ -0.49
RAB28P4-201ENST00000622233 NDUFV2P19404 249 aa11.97□□□□□ -0.49
RAB28P4-201ENST00000622233 GCGRP47871 477 aa11.97□□□□□ -0.49
RAB28P4-201ENST00000622233 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
RAB28P4-201ENST00000622233 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
RAB28P4-201ENST00000622233 TOPBP1Q92547 1522 aa11.96□□□□□ -0.49
RAB28P4-201ENST00000622233 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.49
RAB28P4-201ENST00000622233 POTEMA6NI47 508 aa11.96□□□□□ -0.49
RAB28P4-201ENST00000622233 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.49
RAB28P4-201ENST00000622233 HLA-CQ95604 372 aa11.96□□□□□ -0.49
RAB28P4-201ENST00000622233 CLK2P49760 499 aaKnown RBP11.95□□□□□ -0.5
RAB28P4-201ENST00000622233 SLF2Q8IX21 1173 aa11.95□□□□□ -0.5
RAB28P4-201ENST00000622233 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
RAB28P4-201ENST00000622233 KDM4AO75164 1064 aa11.94□□□□□ -0.5
RAB28P4-201ENST00000622233 BCAMP50895 628 aa11.94□□□□□ -0.5
RAB28P4-201ENST00000622233 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
RAB28P4-201ENST00000622233 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
RAB28P4-201ENST00000622233 CFHP08603 1231 aa11.93□□□□□ -0.5
RAB28P4-201ENST00000622233 GUCA2AQ02747 115 aa11.93□□□□□ -0.5
RAB28P4-201ENST00000622233 RIC3Q7Z5B4 369 aa11.93□□□□□ -0.5
RAB28P4-201ENST00000622233 LRCH3Q96II8 777 aa11.93□□□□□ -0.5
RAB28P4-201ENST00000622233 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.93□□□□□ -0.5
RAB28P4-201ENST00000622233 GOLGA8CPA6NN73 597 aa11.92□□□□□ -0.5
RAB28P4-201ENST00000622233 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
RAB28P4-201ENST00000622233 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms