RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 PMFBP1Q8TBY8 1022 aa16.87■□□□□ 0.29
SIRPA-204ENST00000622179 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
SIRPA-204ENST00000622179 SAMD9Q5K651 1589 aa16.87■□□□□ 0.29
SIRPA-204ENST00000622179 RTN4Q9NQC3 1192 aaKnown RBP16.87■□□□□ 0.29
SIRPA-204ENST00000622179 CHMP4BQ9H444 224 aaKnown RBP16.86■□□□□ 0.29
SIRPA-204ENST00000622179 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
SIRPA-204ENST00000622179 ANP32BQ92688 251 aaKnown RBP16.85■□□□□ 0.29
SIRPA-204ENST00000622179 PANK1Q8TE04 598 aa16.84■□□□□ 0.29
SIRPA-204ENST00000622179 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
SIRPA-204ENST00000622179 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
SIRPA-204ENST00000622179 FAM161AQ3B820 660 aa16.83■□□□□ 0.28
SIRPA-204ENST00000622179 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
SIRPA-204ENST00000622179 BCAR3O75815 825 aa16.81■□□□□ 0.28
SIRPA-204ENST00000622179 CALD1Q05682 793 aaKnown RBP16.81■□□□□ 0.28
SIRPA-204ENST00000622179 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
SIRPA-204ENST00000622179 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
SIRPA-204ENST00000622179 DIAPH1O60610 1272 aaKnown RBP16.8■□□□□ 0.28
SIRPA-204ENST00000622179 RIPK4P57078 832 aa16.8■□□□□ 0.28
SIRPA-204ENST00000622179 DISP3Q9P2K9 1392 aa16.8■□□□□ 0.28
SIRPA-204ENST00000622179 ZKSCAN2Q63HK3 967 aa16.8■□□□□ 0.28
SIRPA-204ENST00000622179 ADGRF5Q8IZF2 1346 aa16.8■□□□□ 0.28
SIRPA-204ENST00000622179 HSP90AB1P08238 724 aaKnown RBP16.79■□□□□ 0.28
SIRPA-204ENST00000622179 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
SIRPA-204ENST00000622179 PZPP20742 1482 aa16.79■□□□□ 0.28
SIRPA-204ENST00000622179 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
SIRPA-204ENST00000622179 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
SIRPA-204ENST00000622179 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
SIRPA-204ENST00000622179 HSCBQ8IWL3 235 aa16.77■□□□□ 0.28
SIRPA-204ENST00000622179 PRAM1Q96QH2 718 aa16.77■□□□□ 0.28
SIRPA-204ENST00000622179 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.28
SIRPA-204ENST00000622179 HMOX1P09601 288 aa16.77■□□□□ 0.28
SIRPA-204ENST00000622179 NCLP19338 710 aaKnown RBP16.77■□□□□ 0.28
SIRPA-204ENST00000622179 COG3Q96JB2 828 aa16.77■□□□□ 0.27
SIRPA-204ENST00000622179 SKAP1Q86WV1 359 aa16.76■□□□□ 0.27
SIRPA-204ENST00000622179 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
SIRPA-204ENST00000622179 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
SIRPA-204ENST00000622179 EID1Q9Y6B2 187 aa16.75■□□□□ 0.27
SIRPA-204ENST00000622179 DNMT1P26358 1616 aaKnown RBP16.74■□□□□ 0.27
SIRPA-204ENST00000622179 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
SIRPA-204ENST00000622179 C20orf194Q5TEA3 1177 aa16.74■□□□□ 0.27
SIRPA-204ENST00000622179 DZIP1LQ8IYY4 767 aaKnown RBP16.74■□□□□ 0.27
SIRPA-204ENST00000622179 GOLGA6L22H0YM25 854 aa16.74■□□□□ 0.27
SIRPA-204ENST00000622179 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
SIRPA-204ENST00000622179 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
SIRPA-204ENST00000622179 RALGAPBQ86X10 1494 aa16.73■□□□□ 0.27
SIRPA-204ENST00000622179 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
SIRPA-204ENST00000622179 SLC4A10Q6U841 1118 aa16.73■□□□□ 0.27
SIRPA-204ENST00000622179 AMPHP49418 695 aa16.72■□□□□ 0.27
SIRPA-204ENST00000622179 NUP160Q12769 1436 aa16.72■□□□□ 0.27
SIRPA-204ENST00000622179 A0A0G2JS52 829 aa16.71■□□□□ 0.27
SIRPA-204ENST00000622179 MSH5O43196 834 aa16.71■□□□□ 0.27
SIRPA-204ENST00000622179 KDM6BO15054 1643 aa16.71■□□□□ 0.27
SIRPA-204ENST00000622179 TSR2Q969E8 191 aaKnown RBP16.71■□□□□ 0.27
SIRPA-204ENST00000622179 FAM135AQ9P2D6 1515 aa16.71■□□□□ 0.27
SIRPA-204ENST00000622179 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
SIRPA-204ENST00000622179 TEX14Q8IWB6 1497 aa16.7■□□□□ 0.26
SIRPA-204ENST00000622179 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
SIRPA-204ENST00000622179 PLCH2O75038 1416 aa16.7■□□□□ 0.26
SIRPA-204ENST00000622179 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
SIRPA-204ENST00000622179 TESK2Q96S53 571 aa16.7■□□□□ 0.26
SIRPA-204ENST00000622179 FANCAO15360 1455 aa16.69■□□□□ 0.26
SIRPA-204ENST00000622179 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
SIRPA-204ENST00000622179 OS9Q13438 667 aaPredicted RBP16.69■□□□□ 0.26
SIRPA-204ENST00000622179 CD109Q6YHK3 1445 aa16.69■□□□□ 0.26
SIRPA-204ENST00000622179 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
SIRPA-204ENST00000622179 SLFN5Q08AF3 891 aa16.69■□□□□ 0.26
SIRPA-204ENST00000622179 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
SIRPA-204ENST00000622179 GZF1Q9H116 711 aaPredicted RBP16.68■□□□□ 0.26
SIRPA-204ENST00000622179 SLC52A1Q9NWF4 448 aa16.68■□□□□ 0.26
SIRPA-204ENST00000622179 NSD3Q9BZ95 1437 aa16.68■□□□□ 0.26
SIRPA-204ENST00000622179 EXOSC9Q06265 439 aaKnown RBP16.67■□□□□ 0.26
SIRPA-204ENST00000622179 BACH2Q9BYV9 841 aa16.67■□□□□ 0.26
SIRPA-204ENST00000622179 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
SIRPA-204ENST00000622179 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
SIRPA-204ENST00000622179 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
SIRPA-204ENST00000622179 DDX19BQ9UMR2 479 aa16.67■□□□□ 0.26
SIRPA-204ENST00000622179 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
SIRPA-204ENST00000622179 CEP170Q5SW79 1584 aa16.65■□□□□ 0.26
SIRPA-204ENST00000622179 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
SIRPA-204ENST00000622179 IDI1Q13907 227 aa16.65■□□□□ 0.26
SIRPA-204ENST00000622179 FOXD4L1Q9NU39 408 aa16.65■□□□□ 0.26
SIRPA-204ENST00000622179 RPGRIP1LQ68CZ1 1315 aa16.64■□□□□ 0.25
SIRPA-204ENST00000622179 SCAF11Q99590 1463 aaKnown RBP16.64■□□□□ 0.25
SIRPA-204ENST00000622179 TRIM44Q96DX7 344 aaPredicted RBP16.64■□□□□ 0.25
SIRPA-204ENST00000622179 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
SIRPA-204ENST00000622179 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
SIRPA-204ENST00000622179 NOS1P29475 1434 aa16.62■□□□□ 0.25
SIRPA-204ENST00000622179 AMER1Q5JTC6 1135 aaPredicted RBP16.62■□□□□ 0.25
SIRPA-204ENST00000622179 DUSP27Q5VZP5 1158 aa16.62■□□□□ 0.25
SIRPA-204ENST00000622179 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
SIRPA-204ENST00000622179 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
SIRPA-204ENST00000622179 LNPKQ9C0E8 428 aa16.62■□□□□ 0.25
SIRPA-204ENST00000622179 SHANK2Q9UPX8 1470 aa16.62■□□□□ 0.25
SIRPA-204ENST00000622179 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.62■□□□□ 0.25
SIRPA-204ENST00000622179 DUOX2Q9NRD8 1548 aa16.61■□□□□ 0.25
SIRPA-204ENST00000622179 PARD3Q8TEW0 1356 aa16.6■□□□□ 0.25
SIRPA-204ENST00000622179 GCC2Q8IWJ2 1684 aa16.6■□□□□ 0.25
SIRPA-204ENST00000622179 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
SIRPA-204ENST00000622179 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
SIRPA-204ENST00000622179 USP35Q9P2H5 1018 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms