RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
SCAMP1-207ENST00000621999 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
SCAMP1-207ENST00000621999 COL17A1Q9UMD9 1497 aaPredicted RBP16.82■□□□□ 0.28
SCAMP1-207ENST00000621999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■■■■□ 19.6
SCAMP1-207ENST00000621999 KIF7Q2M1P5 1343 aa16.81■□□□□ 0.28
SCAMP1-207ENST00000621999 CNTLNQ9NXG0 1405 aa16.81■□□□□ 0.28
SCAMP1-207ENST00000621999 RBM33Q96EV2 1170 aaKnown RBP16.8■□□□□ 0.28
SCAMP1-207ENST00000621999 WAPLQ7Z5K2 1190 aa16.8■□□□□ 0.28
SCAMP1-207ENST00000621999 PLXNC1O60486 1568 aa16.77■□□□□ 0.28
SCAMP1-207ENST00000621999 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.28
SCAMP1-207ENST00000621999 CFAP53Q96M91 514 aa16.77■□□□□ 0.27
SCAMP1-207ENST00000621999 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.27
SCAMP1-207ENST00000621999 CCDC7Q96M83 1385 aa16.75■□□□□ 0.27
SCAMP1-207ENST00000621999 AMOTL2Q9Y2J4 779 aa16.75■□□□□ 0.27
SCAMP1-207ENST00000621999 RIMS2Q9UQ26 1411 aa16.75■□□□□ 0.27
SCAMP1-207ENST00000621999 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
SCAMP1-207ENST00000621999 CROCC2H7BZ55 1655 aa16.74■□□□□ 0.27
SCAMP1-207ENST00000621999 ATF3P18847 181 aa16.73■□□□□ 0.27
SCAMP1-207ENST00000621999 CDK19Q9BWU1 502 aa16.72■□□□□ 0.27
SCAMP1-207ENST00000621999 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
SCAMP1-207ENST00000621999 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
SCAMP1-207ENST00000621999 NCKAP5LQ9HCH0 1330 aa16.7■□□□□ 0.26
SCAMP1-207ENST00000621999 UGGT1Q9NYU2 1555 aa16.7■□□□□ 0.26
SCAMP1-207ENST00000621999 PMFBP1Q8TBY8 1022 aa16.7■□□□□ 0.26
SCAMP1-207ENST00000621999 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
SCAMP1-207ENST00000621999 KDM5DQ9BY66 1539 aa16.7■□□□□ 0.26
SCAMP1-207ENST00000621999 KIDINS220Q9ULH0 1771 aa16.7■□□□□ 0.26
SCAMP1-207ENST00000621999 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
SCAMP1-207ENST00000621999 DIP2CQ9Y2E4 1556 aa16.69■□□□□ 0.26
SCAMP1-207ENST00000621999 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
SCAMP1-207ENST00000621999 PRAG1Q86YV5 1406 aa16.68■□□□□ 0.26
SCAMP1-207ENST00000621999 ABCC3O15438 1527 aa16.68■□□□□ 0.26
SCAMP1-207ENST00000621999 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
SCAMP1-207ENST00000621999 PSME1Q06323 249 aa16.68■□□□□ 0.26
SCAMP1-207ENST00000621999 ESCO1Q5FWF5 840 aa16.67■□□□□ 0.26
SCAMP1-207ENST00000621999 CABP1Q9NZU7 370 aa16.67■□□□□ 0.26
SCAMP1-207ENST00000621999 ABCA6Q8N139 1617 aa16.67■□□□□ 0.26
SCAMP1-207ENST00000621999 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
SCAMP1-207ENST00000621999 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
SCAMP1-207ENST00000621999 LTKP29376 864 aa16.66■□□□□ 0.26
SCAMP1-207ENST00000621999 RALBP1Q15311 655 aa16.66■□□□□ 0.26
SCAMP1-207ENST00000621999 KDM5CP41229 1560 aa16.66■□□□□ 0.26
SCAMP1-207ENST00000621999 PLA2R1Q13018 1463 aa16.66■□□□□ 0.26
SCAMP1-207ENST00000621999 UHRF1BP1Q6BDS2 1440 aa16.65■□□□□ 0.26
SCAMP1-207ENST00000621999 CGNL1Q0VF96 1302 aa16.65■□□□□ 0.26
SCAMP1-207ENST00000621999 NUTM2GQ5VZR2 741 aa16.64■□□□□ 0.25
SCAMP1-207ENST00000621999 GGNBP2Q9H3C7 697 aa16.64■□□□□ 0.25
SCAMP1-207ENST00000621999 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
SCAMP1-207ENST00000621999 A0A0G2JS52 829 aa16.62■□□□□ 0.25
SCAMP1-207ENST00000621999 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
SCAMP1-207ENST00000621999 ERVK-7P63135 1459 aa16.62■□□□□ 0.25
SCAMP1-207ENST00000621999 SCAF11Q99590 1463 aaKnown RBP16.62■□□□□ 0.25
SCAMP1-207ENST00000621999 COG3Q96JB2 828 aa16.61■□□□□ 0.25
SCAMP1-207ENST00000621999 PELP1Q8IZL8 1130 aaKnown RBP16.61■□□□□ 0.25
SCAMP1-207ENST00000621999 IQGAP3Q86VI3 1631 aa16.61■□□□□ 0.25
SCAMP1-207ENST00000621999 NUDT16Q96DE0 195 aaKnown RBP16.6■□□□□ 0.25
SCAMP1-207ENST00000621999 PTPRTO14522 1441 aa16.6■□□□□ 0.25
SCAMP1-207ENST00000621999 EFCAB6Q5THR3 1501 aa16.6■□□□□ 0.25
SCAMP1-207ENST00000621999 TET3O43151 1660 aa16.59■□□□□ 0.25
SCAMP1-207ENST00000621999 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
SCAMP1-207ENST00000621999 UNC13BO14795 1591 aa16.59■□□□□ 0.25
SCAMP1-207ENST00000621999 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
SCAMP1-207ENST00000621999 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.25
SCAMP1-207ENST00000621999 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.25
SCAMP1-207ENST00000621999 NLRP13Q86W25 1043 aa16.58■□□□□ 0.25
SCAMP1-207ENST00000621999 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.25
SCAMP1-207ENST00000621999 KCNA6P17658 529 aa16.58■□□□□ 0.25
SCAMP1-207ENST00000621999 RALGAPBQ86X10 1494 aa16.58■□□□□ 0.24
SCAMP1-207ENST00000621999 MAPK8IP3Q9UPT6 1336 aa16.58■□□□□ 0.24
SCAMP1-207ENST00000621999 AMPHP49418 695 aa16.58■□□□□ 0.24
SCAMP1-207ENST00000621999 XPCQ01831 940 aaPredicted RBP16.58■□□□□ 0.24
SCAMP1-207ENST00000621999 ARHGAP31Q2M1Z3 1444 aa16.57■□□□□ 0.24
SCAMP1-207ENST00000621999 TBX22Q9Y458 520 aa16.57■□□□□ 0.24
SCAMP1-207ENST00000621999 TRPM2O94759 1503 aa16.57■□□□□ 0.24
SCAMP1-207ENST00000621999 DMRT2Q9Y5R5 561 aa16.57■□□□□ 0.24
SCAMP1-207ENST00000621999 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
SCAMP1-207ENST00000621999 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
SCAMP1-207ENST00000621999 ARHGEF40Q8TER5 1519 aa16.57■□□□□ 0.24
SCAMP1-207ENST00000621999 CEP152O94986 1710 aa16.57■□□□□ 0.24
SCAMP1-207ENST00000621999 NLRP6P59044 892 aa16.56■□□□□ 0.24
SCAMP1-207ENST00000621999 CANXP27824 592 aaKnown RBP16.55■□□□□ 0.24
SCAMP1-207ENST00000621999 EIF2AK4Q9P2K8 1649 aaKnown RBP16.55■□□□□ 0.24
SCAMP1-207ENST00000621999 CSB-PGBD3P0DP91 1061 aa16.55■□□□□ 0.24
SCAMP1-207ENST00000621999 DISP3Q9P2K9 1392 aa16.54■□□□□ 0.24
SCAMP1-207ENST00000621999 ABTB2Q8N961 1025 aa16.54■□□□□ 0.24
SCAMP1-207ENST00000621999 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
SCAMP1-207ENST00000621999 ATAD2Q6PL18 1390 aa16.53■□□□□ 0.24
SCAMP1-207ENST00000621999 ZMYM4Q5VZL5 1548 aa16.53■□□□□ 0.24
SCAMP1-207ENST00000621999 RICTORQ6R327 1708 aa16.52■□□□□ 0.24
SCAMP1-207ENST00000621999 AGLP35573 1532 aa16.52■□□□□ 0.24
SCAMP1-207ENST00000621999 FOXO3O43524 673 aa16.52■□□□□ 0.23
SCAMP1-207ENST00000621999 TESK2Q96S53 571 aa16.52■□□□□ 0.23
SCAMP1-207ENST00000621999 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.23
SCAMP1-207ENST00000621999 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
SCAMP1-207ENST00000621999 YTHDC2Q9H6S0 1430 aaKnown RBP16.51■□□□□ 0.23
SCAMP1-207ENST00000621999 CLTCQ00610 1675 aaKnown RBP16.51■□□□□ 0.23
SCAMP1-207ENST00000621999 MYT1Q01538 1121 aa16.51■□□□□ 0.23
SCAMP1-207ENST00000621999 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
SCAMP1-207ENST00000621999 E9PCH4 1651 aa16.5■□□□□ 0.23
SCAMP1-207ENST00000621999 KIF13AQ9H1H9 1805 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms