RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 KIAA1210Q9ULL0 1709 aa18.25■□□□□ 0.51
FMR1-220ENST00000621987 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
FMR1-220ENST00000621987 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
FMR1-220ENST00000621987 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
FMR1-220ENST00000621987 A2ML1A8K2U0 1454 aa18.24■□□□□ 0.51
FMR1-220ENST00000621987 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.51
FMR1-220ENST00000621987 ZFYVE9O95405 1425 aa18.22■□□□□ 0.51
FMR1-220ENST00000621987 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
FMR1-220ENST00000621987 CEBPAP49715 358 aaPredicted RBP18.21■□□□□ 0.51
FMR1-220ENST00000621987 ADGRF5Q8IZF2 1346 aa18.21■□□□□ 0.51
FMR1-220ENST00000621987 NLRP1Q9C000 1473 aa18.21■□□□□ 0.51
FMR1-220ENST00000621987 ROCK2O75116 1388 aaKnown RBP18.2■□□□□ 0.5
FMR1-220ENST00000621987 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
FMR1-220ENST00000621987 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
FMR1-220ENST00000621987 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
FMR1-220ENST00000621987 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
FMR1-220ENST00000621987 USP47Q96K76 1375 aa18.18■□□□□ 0.5
FMR1-220ENST00000621987 VGFO15240 615 aaPredicted RBP18.17■□□□□ 0.5
FMR1-220ENST00000621987 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
FMR1-220ENST00000621987 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
FMR1-220ENST00000621987 IQGAP1P46940 1657 aa18.15■□□□□ 0.5
FMR1-220ENST00000621987 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
FMR1-220ENST00000621987 SETBP1Q9Y6X0 1596 aa18.14■□□□□ 0.49
FMR1-220ENST00000621987 RIMS2Q9UQ26 1411 aa18.14■□□□□ 0.49
FMR1-220ENST00000621987 ADRA2BP18089 450 aa18.12■□□□□ 0.49
FMR1-220ENST00000621987 CFAP70Q5T0N1 1121 aa18.12■□□□□ 0.49
FMR1-220ENST00000621987 C14orf93Q9H972 538 aaKnown RBP18.12■□□□□ 0.49
FMR1-220ENST00000621987 ADGRB1O14514 1584 aa18.11■□□□□ 0.49
FMR1-220ENST00000621987 PTPRMP28827 1452 aa18.1■□□□□ 0.49
FMR1-220ENST00000621987 POLR1AO95602 1720 aaPredicted RBP18.09■□□□□ 0.49
FMR1-220ENST00000621987 NUTM2DQ5VT03 806 aaPredicted RBP18.09■□□□□ 0.49
FMR1-220ENST00000621987 TMEM2Q9UHN6 1383 aa18.09■□□□□ 0.49
FMR1-220ENST00000621987 SCAF11Q99590 1463 aaKnown RBP18.09■□□□□ 0.49
FMR1-220ENST00000621987 ZNF142P52746 1687 aaPredicted RBP18.08■□□□□ 0.49
FMR1-220ENST00000621987 SLIT1O75093 1534 aa18.08■□□□□ 0.48
FMR1-220ENST00000621987 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
FMR1-220ENST00000621987 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
FMR1-220ENST00000621987 DIEXFQ68CQ4 756 aaKnown RBP18.07■□□□□ 0.48
FMR1-220ENST00000621987 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
FMR1-220ENST00000621987 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
FMR1-220ENST00000621987 ALKQ9UM73 1620 aa18.05■□□□□ 0.48
FMR1-220ENST00000621987 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
FMR1-220ENST00000621987 ASXL1Q8IXJ9 1541 aa18.05■□□□□ 0.48
FMR1-220ENST00000621987 SETD1AO15047 1707 aaKnown RBP18.05■□□□□ 0.48
FMR1-220ENST00000621987 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
FMR1-220ENST00000621987 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
FMR1-220ENST00000621987 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
FMR1-220ENST00000621987 WASHC2AQ641Q2 1341 aa18.04■□□□□ 0.48
FMR1-220ENST00000621987 CCDC7Q96M83 1385 aa18.03■□□□□ 0.48
FMR1-220ENST00000621987 THEMISQ8N1K5 641 aaPredicted RBP18.02■□□□□ 0.47
FMR1-220ENST00000621987 EIF3AQ14152 1382 aaKnown RBP18.01■□□□□ 0.47
FMR1-220ENST00000621987 TESK2Q96S53 571 aa18.01■□□□□ 0.47
FMR1-220ENST00000621987 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
FMR1-220ENST00000621987 TMEM132EQ6IEE7 984 aa17.99■□□□□ 0.47
FMR1-220ENST00000621987 PLEKHG1Q9ULL1 1385 aa17.99■□□□□ 0.47
FMR1-220ENST00000621987 LTKP29376 864 aa17.98■□□□□ 0.47
FMR1-220ENST00000621987 ARHGEF28Q8N1W1 1705 aaKnown RBP17.97■□□□□ 0.47
FMR1-220ENST00000621987 DDX10Q13206 875 aaKnown RBP17.96■□□□□ 0.47
FMR1-220ENST00000621987 MED14O60244 1454 aa17.95■□□□□ 0.46
FMR1-220ENST00000621987 ADAMTS13Q76LX8 1427 aa17.95■□□□□ 0.46
FMR1-220ENST00000621987 YTHDC2Q9H6S0 1430 aaKnown RBP17.95■□□□□ 0.46
FMR1-220ENST00000621987 TXNDC2Q86VQ3 553 aa17.95■□□□□ 0.46
FMR1-220ENST00000621987 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
FMR1-220ENST00000621987 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
FMR1-220ENST00000621987 KDM4FA0A1W2PPD8 638 aa17.94■□□□□ 0.46
FMR1-220ENST00000621987 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
FMR1-220ENST00000621987 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
FMR1-220ENST00000621987 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
FMR1-220ENST00000621987 DLC1Q96QB1 1528 aa17.92■□□□□ 0.46
FMR1-220ENST00000621987 LRPPRCP42704 1394 aaKnown RBP17.92■□□□□ 0.46
FMR1-220ENST00000621987 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
FMR1-220ENST00000621987 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
FMR1-220ENST00000621987 METP08581 1390 aa17.91■□□□□ 0.46
FMR1-220ENST00000621987 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
FMR1-220ENST00000621987 TMF1P82094 1093 aa17.91■□□□□ 0.46
FMR1-220ENST00000621987 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
FMR1-220ENST00000621987 KNDC1Q76NI1 1749 aa17.9■□□□□ 0.46
FMR1-220ENST00000621987 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
FMR1-220ENST00000621987 TECPR2O15040 1411 aa17.88■□□□□ 0.45
FMR1-220ENST00000621987 ANKLE2Q86XL3 938 aa17.87■□□□□ 0.45
FMR1-220ENST00000621987 STK26Q9P289 416 aa17.87■□□□□ 0.45
FMR1-220ENST00000621987 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
FMR1-220ENST00000621987 CPS1P31327 1500 aa17.86■□□□□ 0.45
FMR1-220ENST00000621987 BCANQ96GW7 911 aa17.86■□□□□ 0.45
FMR1-220ENST00000621987 CDCA8Q53HL2 280 aa17.84■□□□□ 0.45
FMR1-220ENST00000621987 SIRT1Q96EB6 747 aa17.84■□□□□ 0.45
FMR1-220ENST00000621987 MIER1Q8N108 512 aa17.83■□□□□ 0.45
FMR1-220ENST00000621987 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.44
FMR1-220ENST00000621987 TULP4Q9NRJ4 1543 aa17.82■□□□□ 0.44
FMR1-220ENST00000621987 PRAM1Q96QH2 718 aa17.82■□□□□ 0.44
FMR1-220ENST00000621987 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
FMR1-220ENST00000621987 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
FMR1-220ENST00000621987 PTPRUQ92729 1446 aa17.82■□□□□ 0.44
FMR1-220ENST00000621987 MYOM1P52179 1685 aa17.82■□□□□ 0.44
FMR1-220ENST00000621987 PIK3R4Q99570 1358 aa17.81■□□□□ 0.44
FMR1-220ENST00000621987 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
FMR1-220ENST00000621987 NPHP4O75161 1426 aaPredicted RBP17.8■□□□□ 0.44
FMR1-220ENST00000621987 PUS7Q96PZ0 661 aaKnown RBP17.79■□□□□ 0.44
FMR1-220ENST00000621987 POGKQ9P215 609 aa17.79■□□□□ 0.44
FMR1-220ENST00000621987 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms