RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 FKBP8Q14318 412 aa24.14■■□□□ 1.45
FAM3A-222ENST00000621967 STAG3Q9UJ98 1225 aa24.13■■□□□ 1.45
FAM3A-222ENST00000621967 C11orf95C9JLR9 678 aaPredicted RBP24.11■■□□□ 1.45
FAM3A-222ENST00000621967 SETD1BQ9UPS6 1966 aaKnown RBP24.11■■□□□ 1.45
FAM3A-222ENST00000621967 ADGRB3O60242 1522 aa24.11■■□□□ 1.45
FAM3A-222ENST00000621967 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
FAM3A-222ENST00000621967 TSHZ2Q9NRE2 1034 aa24.08■■□□□ 1.45
FAM3A-222ENST00000621967 TMEM131LA2VDJ0 1609 aa24.08■■□□□ 1.44
FAM3A-222ENST00000621967 NEURL4Q96JN8 1562 aa24.07■■□□□ 1.44
FAM3A-222ENST00000621967 NEFLP07196 543 aa24.07■■□□□ 1.44
FAM3A-222ENST00000621967 ZNF326Q5BKZ1 582 aaKnown RBP24.07■■□□□ 1.44
FAM3A-222ENST00000621967 CEP170BQ9Y4F5 1589 aaPredicted RBP24.07■■□□□ 1.44
FAM3A-222ENST00000621967 UHRF1BP1Q6BDS2 1440 aa24.07■■□□□ 1.44
FAM3A-222ENST00000621967 A2ML1A8K2U0 1454 aa24.06■■□□□ 1.44
FAM3A-222ENST00000621967 KDM5AP29375 1690 aaKnown RBP24.05■■□□□ 1.44
FAM3A-222ENST00000621967 MYO5BQ9ULV0 1848 aa24.05■■□□□ 1.44
FAM3A-222ENST00000621967 UBR1Q8IWV7 1749 aa24.05■■□□□ 1.44
FAM3A-222ENST00000621967 ZNF142P52746 1687 aaPredicted RBP24.04■■□□□ 1.44
FAM3A-222ENST00000621967 KIF7Q2M1P5 1343 aa24.02■■□□□ 1.44
FAM3A-222ENST00000621967 PRKRIP1Q9H875 184 aaPredicted RBP24.02■■□□□ 1.44
FAM3A-222ENST00000621967 BCANQ96GW7 911 aa24.01■■□□□ 1.43
FAM3A-222ENST00000621967 HNRNPUQ00839 825 aaKnown RBP eCLIP24■■□□□ 1.43
FAM3A-222ENST00000621967 DCAF11Q8TEB1 546 aa23.98■■□□□ 1.43
FAM3A-222ENST00000621967 MYT1Q01538 1121 aa23.98■■□□□ 1.43
FAM3A-222ENST00000621967 THEMISQ8N1K5 641 aaPredicted RBP23.98■■□□□ 1.43
FAM3A-222ENST00000621967 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
FAM3A-222ENST00000621967 RALGAPBQ86X10 1494 aa23.97■■□□□ 1.43
FAM3A-222ENST00000621967 KDM2AQ9Y2K7 1162 aa23.96■■□□□ 1.43
FAM3A-222ENST00000621967 NEXMIFQ5QGS0 1516 aa23.95■■□□□ 1.42
FAM3A-222ENST00000621967 IFT172Q9UG01 1749 aa23.95■■□□□ 1.42
FAM3A-222ENST00000621967 PPLO60437 1756 aa23.95■■□□□ 1.42
FAM3A-222ENST00000621967 CCDC184Q52MB2 194 aa23.94■■□□□ 1.42
FAM3A-222ENST00000621967 USP47Q96K76 1375 aa23.94■■□□□ 1.42
FAM3A-222ENST00000621967 TMEM2Q9UHN6 1383 aa23.94■■□□□ 1.42
FAM3A-222ENST00000621967 RIMS2Q9UQ26 1411 aa23.94■■□□□ 1.42
FAM3A-222ENST00000621967 NUTM2DQ5VT03 806 aaPredicted RBP23.91■■□□□ 1.42
FAM3A-222ENST00000621967 MYOM2P54296 1465 aa23.91■■□□□ 1.42
FAM3A-222ENST00000621967 SLIT1O75093 1534 aa23.91■■□□□ 1.42
FAM3A-222ENST00000621967 HDGFP51858 240 aaKnown RBP23.9■■□□□ 1.42
FAM3A-222ENST00000621967 STAC3Q96MF2 364 aa23.9■■□□□ 1.42
FAM3A-222ENST00000621967 ZFYVE9O95405 1425 aa23.9■■□□□ 1.42
FAM3A-222ENST00000621967 VGFO15240 615 aaPredicted RBP23.89■■□□□ 1.42
FAM3A-222ENST00000621967 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.89■■□□□ 1.42
FAM3A-222ENST00000621967 ARHGAP23Q9P227 1491 aa23.89■■□□□ 1.41
FAM3A-222ENST00000621967 LMTK3Q96Q04 1460 aa23.88■■□□□ 1.41
FAM3A-222ENST00000621967 EID1Q9Y6B2 187 aa23.88■■□□□ 1.41
FAM3A-222ENST00000621967 TXNDC2Q86VQ3 553 aa23.85■■□□□ 1.41
FAM3A-222ENST00000621967 MRS2Q9HD23 443 aa23.85■■□□□ 1.41
FAM3A-222ENST00000621967 ADGRF5Q8IZF2 1346 aa23.85■■□□□ 1.41
FAM3A-222ENST00000621967 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
FAM3A-222ENST00000621967 SCAF11Q99590 1463 aaKnown RBP23.83■■□□□ 1.41
FAM3A-222ENST00000621967 ZBED9Q6R2W3 1325 aa23.83■■□□□ 1.41
FAM3A-222ENST00000621967 NRXN1Q9ULB1 1477 aa23.82■■□□□ 1.4
FAM3A-222ENST00000621967 LTKP29376 864 aa23.82■■□□□ 1.4
FAM3A-222ENST00000621967 ANKLE2Q86XL3 938 aa23.82■■□□□ 1.4
FAM3A-222ENST00000621967 PIK3C2GO75747 1445 aa23.81■■□□□ 1.4
FAM3A-222ENST00000621967 HSPA2P54652 639 aa23.81■■□□□ 1.4
FAM3A-222ENST00000621967 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
FAM3A-222ENST00000621967 ROCK2O75116 1388 aaKnown RBP23.8■■□□□ 1.4
FAM3A-222ENST00000621967 TRPM1Q7Z4N2 1603 aa23.8■■□□□ 1.4
FAM3A-222ENST00000621967 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
FAM3A-222ENST00000621967 FAM9BQ8IZU0 186 aa23.78■■□□□ 1.4
FAM3A-222ENST00000621967 PLEKHG1Q9ULL1 1385 aa23.77■■□□□ 1.4
FAM3A-222ENST00000621967 ERICH6BQ5W0A0 696 aa23.77■■□□□ 1.4
FAM3A-222ENST00000621967 SETBP1Q9Y6X0 1596 aa23.74■■□□□ 1.39
FAM3A-222ENST00000621967 LAMC1P11047 1609 aa23.74■■□□□ 1.39
FAM3A-222ENST00000621967 IQGAP1P46940 1657 aa23.74■■□□□ 1.39
FAM3A-222ENST00000621967 KIAA1210Q9ULL0 1709 aa23.73■■□□□ 1.39
FAM3A-222ENST00000621967 NCKAP5LQ9HCH0 1330 aa23.73■■□□□ 1.39
FAM3A-222ENST00000621967 CFAP70Q5T0N1 1121 aa23.72■■□□□ 1.39
FAM3A-222ENST00000621967 CARD11Q9BXL7 1154 aa23.72■■□□□ 1.39
FAM3A-222ENST00000621967 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
FAM3A-222ENST00000621967 C14orf93Q9H972 538 aaKnown RBP23.71■■□□□ 1.39
FAM3A-222ENST00000621967 NPHP4O75161 1426 aaPredicted RBP23.7■■□□□ 1.39
FAM3A-222ENST00000621967 ALKQ9UM73 1620 aa23.7■■□□□ 1.38
FAM3A-222ENST00000621967 MED14O60244 1454 aa23.7■■□□□ 1.38
FAM3A-222ENST00000621967 NBPF1Q3BBV0 1214 aa23.67■■□□□ 1.38
FAM3A-222ENST00000621967 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
FAM3A-222ENST00000621967 DIP2AQ14689 1571 aa23.67■■□□□ 1.38
FAM3A-222ENST00000621967 SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
FAM3A-222ENST00000621967 SETD1AO15047 1707 aaKnown RBP23.65■■□□□ 1.38
FAM3A-222ENST00000621967 STRCQ7RTU9 1775 aa23.65■■□□□ 1.38
FAM3A-222ENST00000621967 IRX6P78412 446 aaPredicted RBP23.64■■□□□ 1.37
FAM3A-222ENST00000621967 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
FAM3A-222ENST00000621967 KTN1Q86UP2 1357 aaKnown RBP23.63■■□□□ 1.37
FAM3A-222ENST00000621967 RBM19Q9Y4C8 960 aaKnown RBP23.63■■□□□ 1.37
FAM3A-222ENST00000621967 SMG6Q86US8 1419 aaKnown RBP23.63■■□□□ 1.37
FAM3A-222ENST00000621967 ST20-MTHFSA0A0A6YYL1 179 aa23.63■■□□□ 1.37
FAM3A-222ENST00000621967 TMEM132EQ6IEE7 984 aa23.63■■□□□ 1.37
FAM3A-222ENST00000621967 ADGRB1O14514 1584 aa23.62■■□□□ 1.37
FAM3A-222ENST00000621967 POLR3GLQ9BT43 218 aa23.62■■□□□ 1.37
FAM3A-222ENST00000621967 TBX22Q9Y458 520 aa23.62■■□□□ 1.37
FAM3A-222ENST00000621967 ASXL1Q8IXJ9 1541 aa23.62■■□□□ 1.37
FAM3A-222ENST00000621967 PPP4R2Q9NY27 417 aa23.61■■□□□ 1.37
FAM3A-222ENST00000621967 METP08581 1390 aa23.6■■□□□ 1.37
FAM3A-222ENST00000621967 YTHDC2Q9H6S0 1430 aaKnown RBP23.57■■□□□ 1.36
FAM3A-222ENST00000621967 PNISRQ8TF01 805 aaKnown RBP23.56■■□□□ 1.36
FAM3A-222ENST00000621967 LRPPRCP42704 1394 aaKnown RBP23.55■■□□□ 1.36
FAM3A-222ENST00000621967 STK26Q9P289 416 aa23.55■■□□□ 1.36
FAM3A-222ENST00000621967 BRD4O60885 1362 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms