RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 NRXN1Q9ULB1 1477 aa38.49■■■■□ 3.75
FMR1-219ENST00000621453 ADGRF5Q8IZF2 1346 aa38.48■■■■□ 3.75
FMR1-219ENST00000621453 SCAF11Q99590 1463 aaKnown RBP38.45■■■■□ 3.75
FMR1-219ENST00000621453 RPGRIP1LQ68CZ1 1315 aa38.44■■■■□ 3.74
FMR1-219ENST00000621453 TESK2Q96S53 571 aa38.44■■■■□ 3.74
FMR1-219ENST00000621453 CLTCQ00610 1675 aaKnown RBP38.43■■■■□ 3.74
FMR1-219ENST00000621453 SLC52A1Q9NWF4 448 aa38.42■■■■□ 3.74
FMR1-219ENST00000621453 PRKRIP1Q9H875 184 aaPredicted RBP38.4■■■■□ 3.74
FMR1-219ENST00000621453 IDI1Q13907 227 aa38.38■■■■□ 3.73
FMR1-219ENST00000621453 CFAP70Q5T0N1 1121 aa38.37■■■■□ 3.73
FMR1-219ENST00000621453 ERVK-7P63135 1459 aa38.36■■■■□ 3.73
FMR1-219ENST00000621453 PIK3C2GO75747 1445 aa38.34■■■■□ 3.73
FMR1-219ENST00000621453 DISP3Q9P2K9 1392 aa38.33■■■■□ 3.73
FMR1-219ENST00000621453 TMF1P82094 1093 aa38.32■■■■□ 3.73
FMR1-219ENST00000621453 MLECQ14165 292 aa38.32■■■■□ 3.73
FMR1-219ENST00000621453 NEXMIFQ5QGS0 1516 aa38.32■■■■□ 3.73
FMR1-219ENST00000621453 EIF3AQ14152 1382 aaKnown RBP38.32■■■■□ 3.72
FMR1-219ENST00000621453 FBXO31Q5XUX0 539 aaPredicted RBP38.3■■■■□ 3.72
FMR1-219ENST00000621453 SETBP1Q9Y6X0 1596 aa38.3■■■■□ 3.72
FMR1-219ENST00000621453 TMEM131LA2VDJ0 1609 aa38.29■■■■□ 3.72
FMR1-219ENST00000621453 MYO5BQ9ULV0 1848 aa38.29■■■■□ 3.72
FMR1-219ENST00000621453 SPATA31D1Q6ZQQ2 1576 aa38.25■■■■□ 3.71
FMR1-219ENST00000621453 VGFO15240 615 aaPredicted RBP38.24■■■■□ 3.71
FMR1-219ENST00000621453 C14orf93Q9H972 538 aaKnown RBP38.23■■■■□ 3.71
FMR1-219ENST00000621453 SCAF1Q9H7N4 1312 aaKnown RBP38.21■■■■□ 3.71
FMR1-219ENST00000621453 TRHP20396 242 aaPredicted RBP38.2■■■■□ 3.71
FMR1-219ENST00000621453 ZFYVE9O95405 1425 aa38.18■■■■□ 3.7
FMR1-219ENST00000621453 ESF1Q9H501 851 aaKnown RBP38.18■■■■□ 3.7
FMR1-219ENST00000621453 ADGRB1O14514 1584 aa38.16■■■■□ 3.7
FMR1-219ENST00000621453 MYO3AQ8NEV4 1616 aa38.16■■■■□ 3.7
FMR1-219ENST00000621453 NUTM2DQ5VT03 806 aaPredicted RBP38.13■■■■□ 3.7
FMR1-219ENST00000621453 CDCA8Q53HL2 280 aa38.12■■■■□ 3.69
FMR1-219ENST00000621453 ZMYM3Q14202 1370 aa38.12■■■■□ 3.69
FMR1-219ENST00000621453 SLC24A1O60721 1099 aa38.11■■■■□ 3.69
FMR1-219ENST00000621453 CCDC184Q52MB2 194 aa38.11■■■■□ 3.69
FMR1-219ENST00000621453 MRS2Q9HD23 443 aa38.07■■■■□ 3.68
FMR1-219ENST00000621453 STAG3Q9UJ98 1225 aa38.07■■■■□ 3.68
FMR1-219ENST00000621453 KTN1Q86UP2 1357 aaKnown RBP38.05■■■■□ 3.68
FMR1-219ENST00000621453 SBNO2Q9Y2G9 1366 aa38.05■■■■□ 3.68
FMR1-219ENST00000621453 CNGB1Q14028 1251 aaPredicted RBP38.05■■■■□ 3.68
FMR1-219ENST00000621453 GTF3C3Q9Y5Q9 886 aa38.05■■■■□ 3.68
FMR1-219ENST00000621453 KDM5AP29375 1690 aaKnown RBP38.04■■■■□ 3.68
FMR1-219ENST00000621453 PER1O15534 1290 aaPredicted RBP38.03■■■■□ 3.68
FMR1-219ENST00000621453 TMEM132EQ6IEE7 984 aa38.03■■■■□ 3.68
FMR1-219ENST00000621453 A2ML1A8K2U0 1454 aa38.02■■■■□ 3.68
FMR1-219ENST00000621453 PANK3Q9H999 370 aa38.01■■■■□ 3.68
FMR1-219ENST00000621453 TRAK1Q9UPV9 953 aa38.01■■■■□ 3.68
FMR1-219ENST00000621453 CENPJQ9HC77 1338 aaPredicted RBP38■■■■□ 3.67
FMR1-219ENST00000621453 RALBP1Q15311 655 aa37.98■■■■□ 3.67
FMR1-219ENST00000621453 QRICH2Q9H0J4 1663 aa37.98■■■■□ 3.67
FMR1-219ENST00000621453 MYOM1P52179 1685 aa37.97■■■■□ 3.67
FMR1-219ENST00000621453 ARHGEF28Q8N1W1 1705 aaKnown RBP37.94■■■■□ 3.66
FMR1-219ENST00000621453 DNAJC5Q9H3Z4 198 aa37.92■■■■□ 3.66
FMR1-219ENST00000621453 ASXL1Q8IXJ9 1541 aa37.91■■■■□ 3.66
FMR1-219ENST00000621453 TNRQ92752 1358 aa37.91■■■■□ 3.66
FMR1-219ENST00000621453 PARD3Q8TEW0 1356 aa37.9■■■■□ 3.66
FMR1-219ENST00000621453 MYBBP1AQ9BQG0 1328 aaKnown RBP37.9■■■■□ 3.66
FMR1-219ENST00000621453 RIMS2Q9UQ26 1411 aa37.89■■■■□ 3.66
FMR1-219ENST00000621453 FAM9BQ8IZU0 186 aa37.88■■■■□ 3.65
FMR1-219ENST00000621453 ALKQ9UM73 1620 aa37.86■■■■□ 3.65
FMR1-219ENST00000621453 HNRNPUQ00839 825 aaKnown RBP eCLIP37.86■■■■□ 3.65
FMR1-219ENST00000621453 BRD4O60885 1362 aaPredicted RBP37.82■■■■□ 3.64
FMR1-219ENST00000621453 FER1L4A9Z1Z3 1794 aa37.81■■■■□ 3.64
FMR1-219ENST00000621453 SENP3Q9H4L4 574 aaPredicted RBP37.81■■■■□ 3.64
FMR1-219ENST00000621453 TMC1Q8TDI8 760 aa37.79■■■■□ 3.64
FMR1-219ENST00000621453 KNSTRNQ9Y448 316 aa37.79■■■■□ 3.64
FMR1-219ENST00000621453 CC2D1BQ5T0F9 858 aaKnown RBP37.78■■■■□ 3.64
FMR1-219ENST00000621453 UBR1Q8IWV7 1749 aa37.78■■■■□ 3.64
FMR1-219ENST00000621453 YTHDC2Q9H6S0 1430 aaKnown RBP37.77■■■■□ 3.64
FMR1-219ENST00000621453 C3P01024 1663 aa37.77■■■■□ 3.64
FMR1-219ENST00000621453 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.77■■■■□ 3.64
FMR1-219ENST00000621453 SETD1AO15047 1707 aaKnown RBP37.74■■■■□ 3.63
FMR1-219ENST00000621453 NLRP13Q86W25 1043 aa37.73■■■■□ 3.63
FMR1-219ENST00000621453 STK26Q9P289 416 aa37.73■■■■□ 3.63
FMR1-219ENST00000621453 PTPRMP28827 1452 aa37.72■■■■□ 3.63
FMR1-219ENST00000621453 NLRP1Q9C000 1473 aa37.71■■■■□ 3.63
FMR1-219ENST00000621453 PNISRQ8TF01 805 aaKnown RBP37.7■■■■□ 3.63
FMR1-219ENST00000621453 TULP4Q9NRJ4 1543 aa37.69■■■■□ 3.62
FMR1-219ENST00000621453 CEBPAP49715 358 aaPredicted RBP37.69■■■■□ 3.62
FMR1-219ENST00000621453 HDGFP51858 240 aaKnown RBP37.69■■■■□ 3.62
FMR1-219ENST00000621453 AMER1Q5JTC6 1135 aaPredicted RBP37.69■■■■□ 3.62
FMR1-219ENST00000621453 EVC2Q86UK5 1308 aa37.69■■■■□ 3.62
FMR1-219ENST00000621453 NRXN3Q9Y4C0 1643 aa37.69■■■■□ 3.62
FMR1-219ENST00000621453 PUS7Q96PZ0 661 aaKnown RBP37.68■■■■□ 3.62
FMR1-219ENST00000621453 NPC1L1Q9UHC9 1359 aa37.66■■■■□ 3.62
FMR1-219ENST00000621453 TMEM2Q9UHN6 1383 aa37.65■■■■□ 3.62
FMR1-219ENST00000621453 SAFB2Q14151 953 aaKnown RBP eCLIP37.61■■■■□ 3.61
FMR1-219ENST00000621453 DLC1Q96QB1 1528 aa37.61■■■■□ 3.61
FMR1-219ENST00000621453 PRAM1Q96QH2 718 aa37.6■■■■□ 3.61
FMR1-219ENST00000621453 LRPPRCP42704 1394 aaKnown RBP37.59■■■■□ 3.61
FMR1-219ENST00000621453 ZBED9Q6R2W3 1325 aa37.59■■■■□ 3.61
FMR1-219ENST00000621453 POGKQ9P215 609 aa37.58■■■■□ 3.61
FMR1-219ENST00000621453 CARD14Q9BXL6 1004 aa37.57■■■■□ 3.6
FMR1-219ENST00000621453 SLC12A5Q9H2X9 1139 aa37.54■■■■□ 3.6
FMR1-219ENST00000621453 ABCC11Q96J66 1382 aa37.53■■■■□ 3.6
FMR1-219ENST00000621453 CABP2Q9NPB3 220 aa37.51■■■■□ 3.6
FMR1-219ENST00000621453 PLPPR3Q6T4P5 718 aa37.5■■■■□ 3.59
FMR1-219ENST00000621453 MINK1Q8N4C8 1332 aaPredicted RBP37.5■■■■□ 3.59
FMR1-219ENST00000621453 METP08581 1390 aa37.49■■■■□ 3.59
FMR1-219ENST00000621453 PPP2R1AP30153 589 aa37.49■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms