RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 MADDQ8WXG6 1647 aa22.4■■□□□ 1.18
CBWD3-216ENST00000621396 ST20-MTHFSA0A0A6YYL1 179 aa22.39■■□□□ 1.18
CBWD3-216ENST00000621396 TMEM131LA2VDJ0 1609 aa22.38■■□□□ 1.17
CBWD3-216ENST00000621396 NEURL4Q96JN8 1562 aa22.37■■□□□ 1.17
CBWD3-216ENST00000621396 C3P01024 1663 aa22.36■■□□□ 1.17
CBWD3-216ENST00000621396 TMEM132EQ6IEE7 984 aa22.35■■□□□ 1.17
CBWD3-216ENST00000621396 RPGRIP1LQ68CZ1 1315 aa22.35■■□□□ 1.17
CBWD3-216ENST00000621396 NEXMIFQ5QGS0 1516 aa22.34■■□□□ 1.17
CBWD3-216ENST00000621396 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
CBWD3-216ENST00000621396 IFT172Q9UG01 1749 aa22.34■■□□□ 1.17
CBWD3-216ENST00000621396 VGFO15240 615 aaPredicted RBP22.34■■□□□ 1.17
CBWD3-216ENST00000621396 STAC3Q96MF2 364 aa22.34■■□□□ 1.17
CBWD3-216ENST00000621396 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
CBWD3-216ENST00000621396 MYOM2P54296 1465 aa22.34■■□□□ 1.17
CBWD3-216ENST00000621396 POLR3GLQ9BT43 218 aa22.33■■□□□ 1.17
CBWD3-216ENST00000621396 PPLO60437 1756 aa22.33■■□□□ 1.17
CBWD3-216ENST00000621396 RIMS1Q86UR5 1692 aaKnown RBP22.32■■□□□ 1.16
CBWD3-216ENST00000621396 GPRASP1Q5JY77 1395 aa22.3■■□□□ 1.16
CBWD3-216ENST00000621396 PIK3C2GO75747 1445 aa22.3■■□□□ 1.16
CBWD3-216ENST00000621396 NRXN1Q9ULB1 1477 aa22.29■■□□□ 1.16
CBWD3-216ENST00000621396 C14orf93Q9H972 538 aaKnown RBP22.28■■□□□ 1.16
CBWD3-216ENST00000621396 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
CBWD3-216ENST00000621396 ADAMTSL3P82987 1691 aa22.26■■□□□ 1.15
CBWD3-216ENST00000621396 KIF7Q2M1P5 1343 aa22.26■■□□□ 1.15
CBWD3-216ENST00000621396 TRAK1Q9UPV9 953 aa22.26■■□□□ 1.15
CBWD3-216ENST00000621396 MIER1Q8N108 512 aa22.25■■□□□ 1.15
CBWD3-216ENST00000621396 LTKP29376 864 aa22.22■■□□□ 1.15
CBWD3-216ENST00000621396 BCANQ96GW7 911 aa22.22■■□□□ 1.15
CBWD3-216ENST00000621396 STK26Q9P289 416 aa22.22■■□□□ 1.15
CBWD3-216ENST00000621396 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
CBWD3-216ENST00000621396 TESK2Q96S53 571 aa22.21■■□□□ 1.15
CBWD3-216ENST00000621396 TMEM2Q9UHN6 1383 aa22.2■■□□□ 1.14
CBWD3-216ENST00000621396 ZFYVE9O95405 1425 aa22.2■■□□□ 1.14
CBWD3-216ENST00000621396 UBR1Q8IWV7 1749 aa22.2■■□□□ 1.14
CBWD3-216ENST00000621396 NLRP1Q9C000 1473 aa22.2■■□□□ 1.14
CBWD3-216ENST00000621396 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
CBWD3-216ENST00000621396 TXNDC2Q86VQ3 553 aa22.18■■□□□ 1.14
CBWD3-216ENST00000621396 SAFB2Q14151 953 aaKnown RBP eCLIP22.17■■□□□ 1.14
CBWD3-216ENST00000621396 PTPRMP28827 1452 aa22.16■■□□□ 1.14
CBWD3-216ENST00000621396 DISP3Q9P2K9 1392 aa22.16■■□□□ 1.14
CBWD3-216ENST00000621396 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
CBWD3-216ENST00000621396 LAMC1P11047 1609 aa22.15■■□□□ 1.14
CBWD3-216ENST00000621396 KIAA1210Q9ULL0 1709 aa22.15■■□□□ 1.14
CBWD3-216ENST00000621396 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.15■■□□□ 1.14
CBWD3-216ENST00000621396 MYO3AQ8NEV4 1616 aa22.14■■□□□ 1.13
CBWD3-216ENST00000621396 CNGB1Q14028 1251 aaPredicted RBP22.14■■□□□ 1.13
CBWD3-216ENST00000621396 THEMISQ8N1K5 641 aaPredicted RBP22.14■■□□□ 1.13
CBWD3-216ENST00000621396 IQGAP1P46940 1657 aa22.14■■□□□ 1.13
CBWD3-216ENST00000621396 SLC26A8Q96RN1 970 aa22.13■■□□□ 1.13
CBWD3-216ENST00000621396 ALKQ9UM73 1620 aa22.12■■□□□ 1.13
CBWD3-216ENST00000621396 ASXL1Q8IXJ9 1541 aa22.12■■□□□ 1.13
CBWD3-216ENST00000621396 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
CBWD3-216ENST00000621396 HDGFP51858 240 aaKnown RBP22.11■■□□□ 1.13
CBWD3-216ENST00000621396 EID1Q9Y6B2 187 aa22.1■■□□□ 1.13
CBWD3-216ENST00000621396 SETBP1Q9Y6X0 1596 aa22.09■■□□□ 1.13
CBWD3-216ENST00000621396 METP08581 1390 aa22.09■■□□□ 1.13
CBWD3-216ENST00000621396 EIF3AQ14152 1382 aaKnown RBP22.09■■□□□ 1.13
CBWD3-216ENST00000621396 TMF1P82094 1093 aa22.09■■□□□ 1.13
CBWD3-216ENST00000621396 CEP170BQ9Y4F5 1589 aaPredicted RBP22.09■■□□□ 1.13
CBWD3-216ENST00000621396 CENPJQ9HC77 1338 aaPredicted RBP22.08■■□□□ 1.13
CBWD3-216ENST00000621396 KDM5AP29375 1690 aaKnown RBP22.06■■□□□ 1.12
CBWD3-216ENST00000621396 NRXN3Q9Y4C0 1643 aa22.05■■□□□ 1.12
CBWD3-216ENST00000621396 YTHDC2Q9H6S0 1430 aaKnown RBP22.05■■□□□ 1.12
CBWD3-216ENST00000621396 PRAM1Q96QH2 718 aa22.05■■□□□ 1.12
CBWD3-216ENST00000621396 WAPLQ7Z5K2 1190 aa22.05■■□□□ 1.12
CBWD3-216ENST00000621396 SLIT1O75093 1534 aa22.02■■□□□ 1.12
CBWD3-216ENST00000621396 ARHGAP23Q9P227 1491 aa22.02■■□□□ 1.12
CBWD3-216ENST00000621396 ADAMTS13Q76LX8 1427 aa22.02■■□□□ 1.11
CBWD3-216ENST00000621396 POGKQ9P215 609 aa22.01■■□□□ 1.11
CBWD3-216ENST00000621396 SETD1BQ9UPS6 1966 aaKnown RBP22.01■■□□□ 1.11
CBWD3-216ENST00000621396 POLR1AO95602 1720 aaPredicted RBP22.01■■□□□ 1.11
CBWD3-216ENST00000621396 PLEKHG1Q9ULL1 1385 aa22.01■■□□□ 1.11
CBWD3-216ENST00000621396 MINK1Q8N4C8 1332 aaPredicted RBP22■■□□□ 1.11
CBWD3-216ENST00000621396 PLEKHH1Q9ULM0 1364 aa21.99■■□□□ 1.11
CBWD3-216ENST00000621396 ANKLE2Q86XL3 938 aa21.98■■□□□ 1.11
CBWD3-216ENST00000621396 SETD1AO15047 1707 aaKnown RBP21.98■■□□□ 1.11
CBWD3-216ENST00000621396 ANP32CO43423 234 aa21.98■■□□□ 1.11
CBWD3-216ENST00000621396 HSPA2P54652 639 aa21.97■■□□□ 1.11
CBWD3-216ENST00000621396 ARHGEF28Q8N1W1 1705 aaKnown RBP21.97■■□□□ 1.11
CBWD3-216ENST00000621396 NCKAP5LQ9HCH0 1330 aa21.95■■□□□ 1.1
CBWD3-216ENST00000621396 LRPPRCP42704 1394 aaKnown RBP21.95■■□□□ 1.1
CBWD3-216ENST00000621396 PANK3Q9H999 370 aa21.95■■□□□ 1.1
CBWD3-216ENST00000621396 QRICH2Q9H0J4 1663 aa21.94■■□□□ 1.1
CBWD3-216ENST00000621396 CABP2Q9NPB3 220 aa21.94■■□□□ 1.1
CBWD3-216ENST00000621396 ZNF142P52746 1687 aaPredicted RBP21.92■■□□□ 1.1
CBWD3-216ENST00000621396 PTPRUQ92729 1446 aa21.92■■□□□ 1.1
CBWD3-216ENST00000621396 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
CBWD3-216ENST00000621396 TMC1Q8TDI8 760 aa21.91■■□□□ 1.1
CBWD3-216ENST00000621396 AMOTL2Q9Y2J4 779 aa21.91■■□□□ 1.1
CBWD3-216ENST00000621396 CDCA8Q53HL2 280 aa21.9■■□□□ 1.1
CBWD3-216ENST00000621396 ROBO2Q9HCK4 1378 aa21.9■■□□□ 1.1
CBWD3-216ENST00000621396 SBNO2Q9Y2G9 1366 aa21.9■■□□□ 1.1
CBWD3-216ENST00000621396 YTHDC1Q96MU7 727 aaKnown RBP21.9■■□□□ 1.1
CBWD3-216ENST00000621396 TBX22Q9Y458 520 aa21.9■■□□□ 1.1
CBWD3-216ENST00000621396 MED14O60244 1454 aa21.9■■□□□ 1.1
CBWD3-216ENST00000621396 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.1
CBWD3-216ENST00000621396 RBM33Q96EV2 1170 aaKnown RBP21.89■■□□□ 1.09
CBWD3-216ENST00000621396 SLC12A5Q9H2X9 1139 aa21.89■■□□□ 1.09
CBWD3-216ENST00000621396 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
CBWD3-216ENST00000621396 TULP4Q9NRJ4 1543 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms