RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 NUP155O75694 1391 aa12.92□□□□□ -0.34
GTF2I-219ENST00000621040 HSPA2P54652 639 aa12.91□□□□□ -0.34
GTF2I-219ENST00000621040 NPHP4O75161 1426 aaPredicted RBP12.91□□□□□ -0.34
GTF2I-219ENST00000621040 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
GTF2I-219ENST00000621040 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
GTF2I-219ENST00000621040 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
GTF2I-219ENST00000621040 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
GTF2I-219ENST00000621040 RAB3GAP2Q9H2M9 1393 aa12.87□□□□□ -0.35
GTF2I-219ENST00000621040 IDI1Q13907 227 aa12.87□□□□□ -0.35
GTF2I-219ENST00000621040 PLEKHG1Q9ULL1 1385 aa12.87□□□□□ -0.35
GTF2I-219ENST00000621040 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
GTF2I-219ENST00000621040 LAMC1P11047 1609 aa12.86□□□□□ -0.35
GTF2I-219ENST00000621040 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
GTF2I-219ENST00000621040 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
GTF2I-219ENST00000621040 ADAMTS13Q76LX8 1427 aa12.85□□□□□ -0.35
GTF2I-219ENST00000621040 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
GTF2I-219ENST00000621040 RIMS2Q9UQ26 1411 aa12.84□□□□□ -0.35
GTF2I-219ENST00000621040 CENPBP07199 599 aaPredicted RBP12.84□□□□□ -0.35
GTF2I-219ENST00000621040 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.35
GTF2I-219ENST00000621040 ERICH6Q7L0X2 663 aa12.83□□□□□ -0.36
GTF2I-219ENST00000621040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
GTF2I-219ENST00000621040 MYOM2P54296 1465 aa12.83□□□□□ -0.36
GTF2I-219ENST00000621040 KIAA1210Q9ULL0 1709 aa12.82□□□□□ -0.36
GTF2I-219ENST00000621040 LRRC7Q96NW7 1537 aa12.82□□□□□ -0.36
GTF2I-219ENST00000621040 LTKP29376 864 aa12.81□□□□□ -0.36
GTF2I-219ENST00000621040 NEUROD1Q13562 356 aa12.81□□□□□ -0.36
GTF2I-219ENST00000621040 ASXL1Q8IXJ9 1541 aa12.8□□□□□ -0.36
GTF2I-219ENST00000621040 ANKRD30BQ9BXX2 1392 aa12.8□□□□□ -0.36
GTF2I-219ENST00000621040 ITGAEP38570 1179 aa12.79□□□□□ -0.36
GTF2I-219ENST00000621040 PIK3R4Q99570 1358 aa12.79□□□□□ -0.36
GTF2I-219ENST00000621040 ANKLE2Q86XL3 938 aa12.78□□□□□ -0.36
GTF2I-219ENST00000621040 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
GTF2I-219ENST00000621040 NALCNQ8IZF0 1738 aa12.78□□□□□ -0.36
GTF2I-219ENST00000621040 PLPPR3Q6T4P5 718 aa12.76□□□□□ -0.37
GTF2I-219ENST00000621040 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
GTF2I-219ENST00000621040 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
GTF2I-219ENST00000621040 PIK3C2GO75747 1445 aa12.75□□□□□ -0.37
GTF2I-219ENST00000621040 PTPRUQ92729 1446 aa12.75□□□□□ -0.37
GTF2I-219ENST00000621040 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
GTF2I-219ENST00000621040 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
GTF2I-219ENST00000621040 ADGRB1O14514 1584 aa12.73□□□□□ -0.37
GTF2I-219ENST00000621040 TECPR2O15040 1411 aa12.73□□□□□ -0.37
GTF2I-219ENST00000621040 ZNF335Q9H4Z2 1342 aaPredicted RBP12.73□□□□□ -0.37
GTF2I-219ENST00000621040 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
GTF2I-219ENST00000621040 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
GTF2I-219ENST00000621040 PTCH1Q13635 1447 aa12.72□□□□□ -0.37
GTF2I-219ENST00000621040 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.71□□□□□ -0.37
GTF2I-219ENST00000621040 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.38
GTF2I-219ENST00000621040 ADGRB2O60241 1585 aa12.7□□□□□ -0.38
GTF2I-219ENST00000621040 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
GTF2I-219ENST00000621040 ARHGEF28Q8N1W1 1705 aaKnown RBP12.7□□□□□ -0.38
GTF2I-219ENST00000621040 TXNDC2Q86VQ3 553 aa12.69□□□□□ -0.38
GTF2I-219ENST00000621040 TBX22Q9Y458 520 aa12.69□□□□□ -0.38
GTF2I-219ENST00000621040 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
GTF2I-219ENST00000621040 TRPM1Q7Z4N2 1603 aa12.68□□□□□ -0.38
GTF2I-219ENST00000621040 FBXO41Q8TF61 875 aa12.68□□□□□ -0.38
GTF2I-219ENST00000621040 DCCP43146 1447 aa12.67□□□□□ -0.38
GTF2I-219ENST00000621040 EID1Q9Y6B2 187 aa12.67□□□□□ -0.38
GTF2I-219ENST00000621040 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
GTF2I-219ENST00000621040 FMN2Q9NZ56 1722 aa12.67□□□□□ -0.38
GTF2I-219ENST00000621040 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
GTF2I-219ENST00000621040 KCNA6P17658 529 aa12.66□□□□□ -0.38
GTF2I-219ENST00000621040 ROBO1Q9Y6N7 1651 aa12.65□□□□□ -0.38
GTF2I-219ENST00000621040 METP08581 1390 aa12.64□□□□□ -0.39
GTF2I-219ENST00000621040 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
GTF2I-219ENST00000621040 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
GTF2I-219ENST00000621040 TRIM52Q96A61 297 aa12.63□□□□□ -0.39
GTF2I-219ENST00000621040 FOXD1Q16676 465 aa12.63□□□□□ -0.39
GTF2I-219ENST00000621040 COL16A1Q07092 1604 aaPredicted RBP12.62□□□□□ -0.39
GTF2I-219ENST00000621040 TOPAZ1Q8N9V7 1692 aa12.62□□□□□ -0.39
GTF2I-219ENST00000621040 USP32Q8NFA0 1604 aa12.61□□□□□ -0.39
GTF2I-219ENST00000621040 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
GTF2I-219ENST00000621040 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
GTF2I-219ENST00000621040 FAM135BQ49AJ0 1406 aa12.6□□□□□ -0.39
GTF2I-219ENST00000621040 ADGRL3Q9HAR2 1447 aa12.59□□□□□ -0.39
GTF2I-219ENST00000621040 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
GTF2I-219ENST00000621040 ADGRF5Q8IZF2 1346 aa12.58□□□□□ -0.4
GTF2I-219ENST00000621040 ILDR1Q86SU0 546 aaPredicted RBP12.58□□□□□ -0.4
GTF2I-219ENST00000621040 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.4
GTF2I-219ENST00000621040 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
GTF2I-219ENST00000621040 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
GTF2I-219ENST00000621040 ABCC11Q96J66 1382 aa12.57□□□□□ -0.4
GTF2I-219ENST00000621040 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
GTF2I-219ENST00000621040 COL22A1Q8NFW1 1626 aaPredicted RBP12.57□□□□□ -0.4
GTF2I-219ENST00000621040 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
GTF2I-219ENST00000621040 PHLPP1O60346 1717 aa12.57□□□□□ -0.4
GTF2I-219ENST00000621040 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
GTF2I-219ENST00000621040 SIRT1Q96EB6 747 aa12.56□□□□□ -0.4
GTF2I-219ENST00000621040 ROBO2Q9HCK4 1378 aa12.55□□□□□ -0.4
GTF2I-219ENST00000621040 MST1RQ04912 1400 aa12.55□□□□□ -0.4
GTF2I-219ENST00000621040 YTHDC2Q9H6S0 1430 aaKnown RBP12.55□□□□□ -0.4
GTF2I-219ENST00000621040 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
GTF2I-219ENST00000621040 CRYBG1Q9Y4K1 1723 aa12.55□□□□□ -0.4
GTF2I-219ENST00000621040 SLC26A8Q96RN1 970 aa12.55□□□□□ -0.4
GTF2I-219ENST00000621040 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
GTF2I-219ENST00000621040 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
GTF2I-219ENST00000621040 TRPM3Q9HCF6 1732 aaPredicted RBP12.53□□□□□ -0.4
GTF2I-219ENST00000621040 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
GTF2I-219ENST00000621040 ABCA3Q99758 1704 aa12.52□□□□□ -0.41
GTF2I-219ENST00000621040 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms