RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TCERG1O14776 1098 aaKnown RBP10.67□□□□□ -0.7
PTPDC1-204ENST00000620992 OS9Q13438 667 aaPredicted RBP10.67□□□□□ -0.7
PTPDC1-204ENST00000620992 CRBNQ96SW2 442 aa10.67□□□□□ -0.7
PTPDC1-204ENST00000620992 PDE4AP27815 886 aa10.67□□□□□ -0.7
PTPDC1-204ENST00000620992 PLEKHH2Q8IVE3 1493 aa10.67□□□□□ -0.7
PTPDC1-204ENST00000620992 SYCP2Q9BX26 1530 aa10.66□□□□□ -0.7
PTPDC1-204ENST00000620992 TESK2Q96S53 571 aa10.66□□□□□ -0.7
PTPDC1-204ENST00000620992 WASHC2CQ9Y4E1 1318 aa10.66□□□□□ -0.7
PTPDC1-204ENST00000620992 TRAK1Q9UPV9 953 aa10.66□□□□□ -0.7
PTPDC1-204ENST00000620992 ADAMTS8Q9UP79 889 aa10.66□□□□□ -0.7
PTPDC1-204ENST00000620992 NAP1L2Q9ULW6 460 aaPredicted RBP10.66□□□□□ -0.7
PTPDC1-204ENST00000620992 ERBINQ96RT1 1412 aa10.65□□□□□ -0.7
PTPDC1-204ENST00000620992 SPAG9O60271 1321 aaKnown RBP10.65□□□□□ -0.7
PTPDC1-204ENST00000620992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPDC1-204ENST00000620992 U2AF1L5P0DN76 240 aaPredicted RBP10.65□□□□□ -0.71
PTPDC1-204ENST00000620992 U2AF1Q01081 240 aaKnown RBP eCLIP10.65□□□□□ -0.71
PTPDC1-204ENST00000620992 A2MP01023 1474 aa10.64□□□□□ -0.71
PTPDC1-204ENST00000620992 SAMD9LQ8IVG5 1584 aa10.64□□□□□ -0.71
PTPDC1-204ENST00000620992 KDM5DQ9BY66 1539 aa10.64□□□□□ -0.71
PTPDC1-204ENST00000620992 NCLP19338 710 aaKnown RBP10.63□□□□□ -0.71
PTPDC1-204ENST00000620992 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
PTPDC1-204ENST00000620992 ARHGEF5Q12774 1597 aa10.62□□□□□ -0.71
PTPDC1-204ENST00000620992 NGDNQ8NEJ9 315 aaKnown RBP10.62□□□□□ -0.71
PTPDC1-204ENST00000620992 ANP32BQ92688 251 aaKnown RBP10.62□□□□□ -0.71
PTPDC1-204ENST00000620992 ISY1Q9ULR0 285 aaKnown RBP10.62□□□□□ -0.71
PTPDC1-204ENST00000620992 C20orf194Q5TEA3 1177 aa10.62□□□□□ -0.71
PTPDC1-204ENST00000620992 PLA2R1Q13018 1463 aa10.62□□□□□ -0.71
PTPDC1-204ENST00000620992 AFAP1Q8N556 730 aa10.61□□□□□ -0.71
PTPDC1-204ENST00000620992 COL17A1Q9UMD9 1497 aaPredicted RBP10.61□□□□□ -0.71
PTPDC1-204ENST00000620992 PPP2R1AP30153 589 aa10.61□□□□□ -0.71
PTPDC1-204ENST00000620992 HDGFP51858 240 aaKnown RBP10.61□□□□□ -0.71
PTPDC1-204ENST00000620992 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
PTPDC1-204ENST00000620992 BACH2Q9BYV9 841 aa10.6□□□□□ -0.71
PTPDC1-204ENST00000620992 ELL2O00472 640 aaPredicted RBP10.6□□□□□ -0.71
PTPDC1-204ENST00000620992 NCBP3Q53F19 620 aaKnown RBP10.6□□□□□ -0.71
PTPDC1-204ENST00000620992 GPRASP1Q5JY77 1395 aa10.59□□□□□ -0.71
PTPDC1-204ENST00000620992 CDC42BPBQ9Y5S2 1711 aa10.59□□□□□ -0.71
PTPDC1-204ENST00000620992 CLUAP1Q96AJ1 413 aa10.59□□□□□ -0.71
PTPDC1-204ENST00000620992 TRPM1Q7Z4N2 1603 aa10.59□□□□□ -0.71
PTPDC1-204ENST00000620992 FGD1P98174 961 aa10.59□□□□□ -0.71
PTPDC1-204ENST00000620992 SPRYD3Q8NCJ5 442 aa10.59□□□□□ -0.71
PTPDC1-204ENST00000620992 KCNJ4P48050 445 aa10.59□□□□□ -0.71
PTPDC1-204ENST00000620992 MS4A1P11836 297 aa10.58□□□□□ -0.72
PTPDC1-204ENST00000620992 PREX2Q70Z35 1606 aa10.58□□□□□ -0.72
PTPDC1-204ENST00000620992 FAM69CQ0P6D2 419 aa10.58□□□□□ -0.72
PTPDC1-204ENST00000620992 RTF1Q92541 710 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-204ENST00000620992 TTC37Q6PGP7 1564 aa10.58□□□□□ -0.72
PTPDC1-204ENST00000620992 RRP7AQ9Y3A4 280 aaKnown RBP10.57□□□□□ -0.72
PTPDC1-204ENST00000620992 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.57□□□□□ -0.72
PTPDC1-204ENST00000620992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPDC1-204ENST00000620992 APAF1O14727 1248 aa10.56□□□□□ -0.72
PTPDC1-204ENST00000620992 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
PTPDC1-204ENST00000620992 E9PCH4 1651 aa10.56□□□□□ -0.72
PTPDC1-204ENST00000620992 HDGFL2Q7Z4V5 671 aaPredicted RBP10.55□□□□□ -0.72
PTPDC1-204ENST00000620992 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
PTPDC1-204ENST00000620992 EID1Q9Y6B2 187 aa10.55□□□□□ -0.72
PTPDC1-204ENST00000620992 AEBP2Q6ZN18 517 aaPredicted RBP10.55□□□□□ -0.72
PTPDC1-204ENST00000620992 PLEKHH1Q9ULM0 1364 aa10.55□□□□□ -0.72
PTPDC1-204ENST00000620992 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
PTPDC1-204ENST00000620992 DUSP27Q5VZP5 1158 aa10.55□□□□□ -0.72
PTPDC1-204ENST00000620992 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
PTPDC1-204ENST00000620992 BLMP54132 1417 aaPredicted RBP10.54□□□□□ -0.72
PTPDC1-204ENST00000620992 PRDM15P57071 1507 aaPredicted RBP10.54□□□□□ -0.72
PTPDC1-204ENST00000620992 DUOX2Q9NRD8 1548 aa10.54□□□□□ -0.72
PTPDC1-204ENST00000620992 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
PTPDC1-204ENST00000620992 DDRGK1Q96HY6 314 aa10.54□□□□□ -0.72
PTPDC1-204ENST00000620992 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
PTPDC1-204ENST00000620992 NGEFQ8N5V2 710 aa10.53□□□□□ -0.72
PTPDC1-204ENST00000620992 SLC4A10Q6U841 1118 aa10.53□□□□□ -0.72
PTPDC1-204ENST00000620992 MAGI2Q86UL8 1455 aa10.53□□□□□ -0.72
PTPDC1-204ENST00000620992 AMPHP49418 695 aa10.53□□□□□ -0.72
PTPDC1-204ENST00000620992 NUTM2GQ5VZR2 741 aa10.53□□□□□ -0.72
PTPDC1-204ENST00000620992 EIF2AK4Q9P2K8 1649 aaKnown RBP10.53□□□□□ -0.72
PTPDC1-204ENST00000620992 CENPQQ7L2Z9 268 aaPredicted RBP10.53□□□□□ -0.72
PTPDC1-204ENST00000620992 BCL2L13Q9BXK5 485 aa10.53□□□□□ -0.72
PTPDC1-204ENST00000620992 UNC13BO14795 1591 aa10.52□□□□□ -0.73
PTPDC1-204ENST00000620992 EIF3AQ14152 1382 aaKnown RBP10.52□□□□□ -0.73
PTPDC1-204ENST00000620992 PLCH2O75038 1416 aa10.52□□□□□ -0.73
PTPDC1-204ENST00000620992 BCAR3O75815 825 aa10.51□□□□□ -0.73
PTPDC1-204ENST00000620992 ERCC6L2Q5T890 1561 aa10.51□□□□□ -0.73
PTPDC1-204ENST00000620992 USP35Q9P2H5 1018 aa10.51□□□□□ -0.73
PTPDC1-204ENST00000620992 ZMYM4Q5VZL5 1548 aa10.51□□□□□ -0.73
PTPDC1-204ENST00000620992 SYTL4Q96C24 671 aaPredicted RBP10.51□□□□□ -0.73
PTPDC1-204ENST00000620992 MAST1Q9Y2H9 1570 aa10.5□□□□□ -0.73
PTPDC1-204ENST00000620992 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
PTPDC1-204ENST00000620992 MYO5CQ9NQX4 1742 aa10.5□□□□□ -0.73
PTPDC1-204ENST00000620992 IQGAP3Q86VI3 1631 aa10.5□□□□□ -0.73
PTPDC1-204ENST00000620992 SLFN5Q08AF3 891 aa10.5□□□□□ -0.73
PTPDC1-204ENST00000620992 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
PTPDC1-204ENST00000620992 WDR7Q9Y4E6 1490 aa10.5□□□□□ -0.73
PTPDC1-204ENST00000620992 SCAF11Q99590 1463 aaKnown RBP10.5□□□□□ -0.73
PTPDC1-204ENST00000620992 NECTIN2Q92692 538 aa10.49□□□□□ -0.73
PTPDC1-204ENST00000620992 ABCC2Q92887 1545 aa10.49□□□□□ -0.73
PTPDC1-204ENST00000620992 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
PTPDC1-204ENST00000620992 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
PTPDC1-204ENST00000620992 GTF2E1P29083 439 aaPredicted RBP10.48□□□□□ -0.73
PTPDC1-204ENST00000620992 ADGRF5Q8IZF2 1346 aa10.48□□□□□ -0.73
PTPDC1-204ENST00000620992 CHD1O14646 1710 aa10.48□□□□□ -0.73
PTPDC1-204ENST00000620992 SCAPERQ9BY12 1400 aa10.47□□□□□ -0.73
PTPDC1-204ENST00000620992 ZNF428Q96B54 188 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms