RNA–Protein interactions for RNA: ENST00000620941.1

SRSF3-208, Transcript of serine and arginine rich splicing factor 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SRSF3, Length 869 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-208ENST00000620941 NUTM2AQ8IVF1 878 aaPredicted RBP21.31■■□□□ 1
SRSF3-208ENST00000620941 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
SRSF3-208ENST00000620941 RRP7BPQ9NSQ0 103 aa21.3■■□□□ 1
SRSF3-208ENST00000620941 CDK12Q9NYV4 1490 aaPredicted RBP21.3■■□□□ 1
SRSF3-208ENST00000620941 SLC52A1Q9NWF4 448 aa21.29■■□□□ 1
SRSF3-208ENST00000620941 KIF15Q9NS87 1388 aa21.28■■□□□ 1
SRSF3-208ENST00000620941 C19orf44Q9H6X5 657 aa21.28■■□□□ 1
SRSF3-208ENST00000620941 COL16A1Q07092 1604 aaPredicted RBP21.28■■□□□ 1
SRSF3-208ENST00000620941 NCOA3Q9Y6Q9 1424 aa21.28■■□□□ 1
SRSF3-208ENST00000620941 NWD1Q149M9 1564 aa21.27■■□□□ 1
SRSF3-208ENST00000620941 MYOM3Q5VTT5 1437 aa21.27■■□□□ 1
SRSF3-208ENST00000620941 ERBINQ96RT1 1412 aa21.27■■□□□ 1
SRSF3-208ENST00000620941 KDM5AP29375 1690 aaKnown RBP21.27■■□□□ 1
SRSF3-208ENST00000620941 AFF2P51816 1311 aa21.25■□□□□ 0.99
SRSF3-208ENST00000620941 NUTM2DQ5VT03 806 aaPredicted RBP21.24■□□□□ 0.99
SRSF3-208ENST00000620941 TBX22Q9Y458 520 aa21.23■□□□□ 0.99
SRSF3-208ENST00000620941 SRCAPQ6ZRS2 3230 aa21.22■□□□□ 0.99
SRSF3-208ENST00000620941 RBM6P78332 1123 aaKnown RBP21.22■□□□□ 0.99
SRSF3-208ENST00000620941 QTRT2Q9H974 415 aaKnown RBP21.22■□□□□ 0.99
SRSF3-208ENST00000620941 ZRANB1Q9UGI0 708 aa21.21■□□□□ 0.99
SRSF3-208ENST00000620941 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
SRSF3-208ENST00000620941 NGLY1Q96IV0 654 aa21.19■□□□□ 0.98
SRSF3-208ENST00000620941 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.18■□□□□ 0.98
SRSF3-208ENST00000620941 AHDC1Q5TGY3 1603 aaPredicted RBP21.18■□□□□ 0.98
SRSF3-208ENST00000620941 SHPRHQ149N8 1683 aa21.18■□□□□ 0.98
SRSF3-208ENST00000620941 BRINP3Q76B58 766 aa21.17■□□□□ 0.98
SRSF3-208ENST00000620941 LRRC59Q96AG4 307 aaKnown RBP21.17■□□□□ 0.98
SRSF3-208ENST00000620941 C8orf37Q96NL8 207 aa21.17■□□□□ 0.98
SRSF3-208ENST00000620941 ADGRB3O60242 1522 aa21.17■□□□□ 0.98
SRSF3-208ENST00000620941 NOS1P29475 1434 aa21.16■□□□□ 0.98
SRSF3-208ENST00000620941 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.98
SRSF3-208ENST00000620941 RIMS2Q9UQ26 1411 aa21.13■□□□□ 0.97
SRSF3-208ENST00000620941 CHD2O14647 1828 aaKnown RBP21.13■□□□□ 0.97
SRSF3-208ENST00000620941 RGS12O14924 1447 aa21.12■□□□□ 0.97
SRSF3-208ENST00000620941 ATAD2Q6PL18 1390 aa21.12■□□□□ 0.97
SRSF3-208ENST00000620941 CHGAP10645 457 aaKnown RBP21.12■□□□□ 0.97
SRSF3-208ENST00000620941 ABCC5O15440 1437 aa21.11■□□□□ 0.97
SRSF3-208ENST00000620941 ZFYVE9O95405 1425 aa21.11■□□□□ 0.97
SRSF3-208ENST00000620941 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
SRSF3-208ENST00000620941 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
SRSF3-208ENST00000620941 KANK4Q5T7N3 995 aaPredicted RBP21.09■□□□□ 0.97
SRSF3-208ENST00000620941 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
SRSF3-208ENST00000620941 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
SRSF3-208ENST00000620941 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.08■□□□□ 0.97
SRSF3-208ENST00000620941 AMOTL2Q9Y2J4 779 aa21.08■□□□□ 0.97
SRSF3-208ENST00000620941 CCDC125Q86Z20 511 aa21.05■□□□□ 0.96
SRSF3-208ENST00000620941 DIP2AQ14689 1571 aa21.05■□□□□ 0.96
SRSF3-208ENST00000620941 ADAMTS2O95450 1211 aa21.04■□□□□ 0.96
SRSF3-208ENST00000620941 RPRD2Q5VT52 1461 aaKnown RBP21.04■□□□□ 0.96
SRSF3-208ENST00000620941 DCCP43146 1447 aa21.04■□□□□ 0.96
SRSF3-208ENST00000620941 DAPK1P53355 1430 aa21.04■□□□□ 0.96
SRSF3-208ENST00000620941 USP21Q9UK80 565 aa21.02■□□□□ 0.96
SRSF3-208ENST00000620941 TRPC5Q9UL62 973 aaPredicted RBP21.02■□□□□ 0.96
SRSF3-208ENST00000620941 ASXL1Q8IXJ9 1541 aa21.01■□□□□ 0.95
SRSF3-208ENST00000620941 ADAMTS13Q76LX8 1427 aa21.01■□□□□ 0.95
SRSF3-208ENST00000620941 VPS8Q8N3P4 1428 aa21■□□□□ 0.95
SRSF3-208ENST00000620941 PNPLA6Q8IY17 1366 aa20.98■□□□□ 0.95
SRSF3-208ENST00000620941 APLP2Q06481 763 aa20.98■□□□□ 0.95
SRSF3-208ENST00000620941 CROCC2H7BZ55 1655 aa20.98■□□□□ 0.95
SRSF3-208ENST00000620941 TRPM2O94759 1503 aa20.96■□□□□ 0.95
SRSF3-208ENST00000620941 DDX17Q92841 729 aaKnown RBP20.96■□□□□ 0.95
SRSF3-208ENST00000620941 MST1RQ04912 1400 aa20.95■□□□□ 0.95
SRSF3-208ENST00000620941 TMEM131LA2VDJ0 1609 aa20.95■□□□□ 0.94
SRSF3-208ENST00000620941 PTPN23Q9H3S7 1636 aa20.94■□□□□ 0.94
SRSF3-208ENST00000620941 GCC2Q8IWJ2 1684 aa20.93■□□□□ 0.94
SRSF3-208ENST00000620941 FNBP4Q8N3X1 1017 aaPredicted RBP20.92■□□□□ 0.94
SRSF3-208ENST00000620941 PTPRUQ92729 1446 aa20.91■□□□□ 0.94
SRSF3-208ENST00000620941 MYO5BQ9ULV0 1848 aa20.91■□□□□ 0.94
SRSF3-208ENST00000620941 SETBP1Q9Y6X0 1596 aa20.91■□□□□ 0.94
SRSF3-208ENST00000620941 NHSL1Q5SYE7 1610 aa20.89■□□□□ 0.94
SRSF3-208ENST00000620941 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.94
SRSF3-208ENST00000620941 PTCH1Q13635 1447 aa20.86■□□□□ 0.93
SRSF3-208ENST00000620941 SF3B2Q13435 895 aaKnown RBP20.85■□□□□ 0.93
SRSF3-208ENST00000620941 ATRNO75882 1429 aa20.84■□□□□ 0.93
SRSF3-208ENST00000620941 ADGRL3Q9HAR2 1447 aa20.84■□□□□ 0.93
SRSF3-208ENST00000620941 ZNF326Q5BKZ1 582 aaKnown RBP20.83■□□□□ 0.93
SRSF3-208ENST00000620941 SOS2Q07890 1332 aaPredicted RBP20.82■□□□□ 0.92
SRSF3-208ENST00000620941 FAM50AQ14320 339 aaKnown RBP20.82■□□□□ 0.92
SRSF3-208ENST00000620941 GJD4Q96KN9 370 aaPredicted RBP20.82■□□□□ 0.92
SRSF3-208ENST00000620941 ADGRL2O95490 1459 aa20.81■□□□□ 0.92
SRSF3-208ENST00000620941 C1orf167Q5SNV9 1468 aa20.8■□□□□ 0.92
SRSF3-208ENST00000620941 ORAI2Q96SN7 254 aa20.79■□□□□ 0.92
SRSF3-208ENST00000620941 METP08581 1390 aa20.79■□□□□ 0.92
SRSF3-208ENST00000620941 UNC13BO14795 1591 aa20.79■□□□□ 0.92
SRSF3-208ENST00000620941 BLMP54132 1417 aaPredicted RBP20.78■□□□□ 0.92
SRSF3-208ENST00000620941 EP400Q96L91 3159 aa20.77■□□□□ 0.92
SRSF3-208ENST00000620941 XRN1Q8IZH2 1706 aaKnown RBP20.76■□□□□ 0.91
SRSF3-208ENST00000620941 DEFB132Q7Z7B7 95 aa20.74■□□□□ 0.91
SRSF3-208ENST00000620941 BCL9LQ86UU0 1499 aa20.73■□□□□ 0.91
SRSF3-208ENST00000620941 NPHP3Q7Z494 1330 aa20.72■□□□□ 0.91
SRSF3-208ENST00000620941 LOC105371045A0A1W2PR82 267 aa20.7■□□□□ 0.9
SRSF3-208ENST00000620941 UNC5CLQ8IV45 518 aa20.7■□□□□ 0.9
SRSF3-208ENST00000620941 E9PCH4 1651 aa20.7■□□□□ 0.9
SRSF3-208ENST00000620941 NUP155O75694 1391 aa20.7■□□□□ 0.9
SRSF3-208ENST00000620941 ESCO1Q5FWF5 840 aa20.69■□□□□ 0.9
SRSF3-208ENST00000620941 LAMC1P11047 1609 aa20.67■□□□□ 0.9
SRSF3-208ENST00000620941 NRXN3Q9Y4C0 1643 aa20.67■□□□□ 0.9
SRSF3-208ENST00000620941 MYOM2P54296 1465 aa20.66■□□□□ 0.9
SRSF3-208ENST00000620941 NALCNQ8IZF0 1738 aa20.65■□□□□ 0.9
SRSF3-208ENST00000620941 LRPPRCP42704 1394 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms