RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 POLR1AO95602 1720 aaPredicted RBP23.23■■□□□ 1.31
PCGF3-213ENST00000620529 NBPF1Q3BBV0 1214 aa23.22■■□□□ 1.31
PCGF3-213ENST00000620529 STAG3Q9UJ98 1225 aa23.22■■□□□ 1.31
PCGF3-213ENST00000620529 NEXMIFQ5QGS0 1516 aa23.21■■□□□ 1.31
PCGF3-213ENST00000620529 NRXN1Q9ULB1 1477 aa23.21■■□□□ 1.31
PCGF3-213ENST00000620529 ADGRF5Q8IZF2 1346 aa23.2■■□□□ 1.3
PCGF3-213ENST00000620529 C3P01024 1663 aa23.19■■□□□ 1.3
PCGF3-213ENST00000620529 DDX10Q13206 875 aaKnown RBP23.17■■□□□ 1.3
PCGF3-213ENST00000620529 TNRQ92752 1358 aa23.17■■□□□ 1.3
PCGF3-213ENST00000620529 VGFO15240 615 aaPredicted RBP23.17■■□□□ 1.3
PCGF3-213ENST00000620529 IQGAP1P46940 1657 aa23.15■■□□□ 1.3
PCGF3-213ENST00000620529 PIK3C2GO75747 1445 aa23.14■■□□□ 1.3
PCGF3-213ENST00000620529 ST20-MTHFSA0A0A6YYL1 179 aa23.13■■□□□ 1.29
PCGF3-213ENST00000620529 WASHC2AQ641Q2 1341 aa23.13■■□□□ 1.29
PCGF3-213ENST00000620529 ZFYVE9O95405 1425 aa23.12■■□□□ 1.29
PCGF3-213ENST00000620529 CFAP70Q5T0N1 1121 aa23.12■■□□□ 1.29
PCGF3-213ENST00000620529 A2ML1A8K2U0 1454 aa23.12■■□□□ 1.29
PCGF3-213ENST00000620529 KDM5AP29375 1690 aaKnown RBP23.12■■□□□ 1.29
PCGF3-213ENST00000620529 CCDC7Q96M83 1385 aa23.12■■□□□ 1.29
PCGF3-213ENST00000620529 SCAF11Q99590 1463 aaKnown RBP23.11■■□□□ 1.29
PCGF3-213ENST00000620529 RIMS1Q86UR5 1692 aaKnown RBP23.11■■□□□ 1.29
PCGF3-213ENST00000620529 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
PCGF3-213ENST00000620529 NUTM2DQ5VT03 806 aaPredicted RBP23.1■■□□□ 1.29
PCGF3-213ENST00000620529 CEBPAP49715 358 aaPredicted RBP23.09■■□□□ 1.29
PCGF3-213ENST00000620529 NLRP1Q9C000 1473 aa23.08■■□□□ 1.29
PCGF3-213ENST00000620529 C11orf95C9JLR9 678 aaPredicted RBP23.08■■□□□ 1.29
PCGF3-213ENST00000620529 EIF3AQ14152 1382 aaKnown RBP23.08■■□□□ 1.28
PCGF3-213ENST00000620529 KIF7Q2M1P5 1343 aa23.07■■□□□ 1.28
PCGF3-213ENST00000620529 ADAMTSL3P82987 1691 aa23.07■■□□□ 1.28
PCGF3-213ENST00000620529 UBR1Q8IWV7 1749 aa23.07■■□□□ 1.28
PCGF3-213ENST00000620529 C14orf93Q9H972 538 aaKnown RBP23.07■■□□□ 1.28
PCGF3-213ENST00000620529 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
PCGF3-213ENST00000620529 MIER1Q8N108 512 aa23.06■■□□□ 1.28
PCGF3-213ENST00000620529 RIMS2Q9UQ26 1411 aa23.05■■□□□ 1.28
PCGF3-213ENST00000620529 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.02■■□□□ 1.28
PCGF3-213ENST00000620529 HDGFP51858 240 aaKnown RBP23.01■■□□□ 1.27
PCGF3-213ENST00000620529 ADGRB1O14514 1584 aa23■■□□□ 1.27
PCGF3-213ENST00000620529 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
PCGF3-213ENST00000620529 MYO3AQ8NEV4 1616 aa22.99■■□□□ 1.27
PCGF3-213ENST00000620529 TMF1P82094 1093 aa22.98■■□□□ 1.27
PCGF3-213ENST00000620529 TESK2Q96S53 571 aa22.97■■□□□ 1.27
PCGF3-213ENST00000620529 TMEM2Q9UHN6 1383 aa22.95■■□□□ 1.26
PCGF3-213ENST00000620529 ALKQ9UM73 1620 aa22.95■■□□□ 1.26
PCGF3-213ENST00000620529 TMEM132EQ6IEE7 984 aa22.94■■□□□ 1.26
PCGF3-213ENST00000620529 ANP32CO43423 234 aa22.94■■□□□ 1.26
PCGF3-213ENST00000620529 SLC24A1O60721 1099 aa22.94■■□□□ 1.26
PCGF3-213ENST00000620529 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
PCGF3-213ENST00000620529 TRAK1Q9UPV9 953 aa22.92■■□□□ 1.26
PCGF3-213ENST00000620529 DISP3Q9P2K9 1392 aa22.91■■□□□ 1.26
PCGF3-213ENST00000620529 SETD1BQ9UPS6 1966 aaKnown RBP22.91■■□□□ 1.26
PCGF3-213ENST00000620529 ARHGEF28Q8N1W1 1705 aaKnown RBP22.91■■□□□ 1.26
PCGF3-213ENST00000620529 ASXL1Q8IXJ9 1541 aa22.91■■□□□ 1.26
PCGF3-213ENST00000620529 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
PCGF3-213ENST00000620529 CDCA8Q53HL2 280 aa22.9■■□□□ 1.26
PCGF3-213ENST00000620529 CENPJQ9HC77 1338 aaPredicted RBP22.9■■□□□ 1.26
PCGF3-213ENST00000620529 CEP170BQ9Y4F5 1589 aaPredicted RBP22.89■■□□□ 1.26
PCGF3-213ENST00000620529 SETD1AO15047 1707 aaKnown RBP22.88■■□□□ 1.25
PCGF3-213ENST00000620529 THEMISQ8N1K5 641 aaPredicted RBP22.88■■□□□ 1.25
PCGF3-213ENST00000620529 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
PCGF3-213ENST00000620529 SLIT1O75093 1534 aa22.88■■□□□ 1.25
PCGF3-213ENST00000620529 EID1Q9Y6B2 187 aa22.88■■□□□ 1.25
PCGF3-213ENST00000620529 SBNO2Q9Y2G9 1366 aa22.87■■□□□ 1.25
PCGF3-213ENST00000620529 ZNF142P52746 1687 aaPredicted RBP22.87■■□□□ 1.25
PCGF3-213ENST00000620529 BCANQ96GW7 911 aa22.86■■□□□ 1.25
PCGF3-213ENST00000620529 ARHGAP23Q9P227 1491 aa22.85■■□□□ 1.25
PCGF3-213ENST00000620529 YTHDC2Q9H6S0 1430 aaKnown RBP22.85■■□□□ 1.25
PCGF3-213ENST00000620529 PTPRMP28827 1452 aa22.84■■□□□ 1.25
PCGF3-213ENST00000620529 TXNDC2Q86VQ3 553 aa22.83■■□□□ 1.25
PCGF3-213ENST00000620529 STK26Q9P289 416 aa22.83■■□□□ 1.25
PCGF3-213ENST00000620529 PLEKHG1Q9ULL1 1385 aa22.83■■□□□ 1.24
PCGF3-213ENST00000620529 LTKP29376 864 aa22.8■■□□□ 1.24
PCGF3-213ENST00000620529 LRPPRCP42704 1394 aaKnown RBP22.78■■□□□ 1.24
PCGF3-213ENST00000620529 DLC1Q96QB1 1528 aa22.78■■□□□ 1.24
PCGF3-213ENST00000620529 POGKQ9P215 609 aa22.76■■□□□ 1.23
PCGF3-213ENST00000620529 KNDC1Q76NI1 1749 aa22.76■■□□□ 1.23
PCGF3-213ENST00000620529 MYOM1P52179 1685 aa22.75■■□□□ 1.23
PCGF3-213ENST00000620529 ADAMTS13Q76LX8 1427 aa22.75■■□□□ 1.23
PCGF3-213ENST00000620529 CCER2I3L3R5 266 aa22.75■■□□□ 1.23
PCGF3-213ENST00000620529 METP08581 1390 aa22.74■■□□□ 1.23
PCGF3-213ENST00000620529 PRAM1Q96QH2 718 aa22.73■■□□□ 1.23
PCGF3-213ENST00000620529 EVC2Q86UK5 1308 aa22.73■■□□□ 1.23
PCGF3-213ENST00000620529 ABCC11Q96J66 1382 aa22.73■■□□□ 1.23
PCGF3-213ENST00000620529 DIP2AQ14689 1571 aa22.73■■□□□ 1.23
PCGF3-213ENST00000620529 SAFB2Q14151 953 aaKnown RBP eCLIP22.73■■□□□ 1.23
PCGF3-213ENST00000620529 PRKRIP1Q9H875 184 aaPredicted RBP22.71■■□□□ 1.23
PCGF3-213ENST00000620529 PANK3Q9H999 370 aa22.7■■□□□ 1.22
PCGF3-213ENST00000620529 MED14O60244 1454 aa22.69■■□□□ 1.22
PCGF3-213ENST00000620529 ANKLE2Q86XL3 938 aa22.69■■□□□ 1.22
PCGF3-213ENST00000620529 TULP4Q9NRJ4 1543 aa22.69■■□□□ 1.22
PCGF3-213ENST00000620529 CPS1P31327 1500 aa22.68■■□□□ 1.22
PCGF3-213ENST00000620529 TECPR2O15040 1411 aa22.68■■□□□ 1.22
PCGF3-213ENST00000620529 PUS7Q96PZ0 661 aaKnown RBP22.67■■□□□ 1.22
PCGF3-213ENST00000620529 SLC26A8Q96RN1 970 aa22.67■■□□□ 1.22
PCGF3-213ENST00000620529 MINK1Q8N4C8 1332 aaPredicted RBP22.67■■□□□ 1.22
PCGF3-213ENST00000620529 TBX22Q9Y458 520 aa22.66■■□□□ 1.22
PCGF3-213ENST00000620529 FAM135BQ49AJ0 1406 aa22.65■■□□□ 1.22
PCGF3-213ENST00000620529 CNGB1Q14028 1251 aaPredicted RBP22.64■■□□□ 1.22
PCGF3-213ENST00000620529 SIRT1Q96EB6 747 aa22.64■■□□□ 1.22
PCGF3-213ENST00000620529 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.22
PCGF3-213ENST00000620529 WAPLQ7Z5K2 1190 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms