RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 COL17A1Q9UMD9 1497 aaPredicted RBP20.83■□□□□ 0.92
DKC1-213ENST00000620277 SEC24BO95487 1268 aa20.83■□□□□ 0.92
DKC1-213ENST00000620277 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.92
DKC1-213ENST00000620277 SLFN5Q08AF3 891 aa20.82■□□□□ 0.92
DKC1-213ENST00000620277 RSPH4AQ5TD94 716 aa20.8■□□□□ 0.92
DKC1-213ENST00000620277 TMEM132EQ6IEE7 984 aa20.8■□□□□ 0.92
DKC1-213ENST00000620277 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
DKC1-213ENST00000620277 KDM2BQ8NHM5 1336 aa20.8■□□□□ 0.92
DKC1-213ENST00000620277 SPAG9O60271 1321 aaKnown RBP20.79■□□□□ 0.92
DKC1-213ENST00000620277 GSE1Q14687 1217 aa20.79■□□□□ 0.92
DKC1-213ENST00000620277 EFCAB2Q5VUJ9 269 aa20.79■□□□□ 0.92
DKC1-213ENST00000620277 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
DKC1-213ENST00000620277 ABCA8O94911 1581 aa20.77■□□□□ 0.92
DKC1-213ENST00000620277 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.92
DKC1-213ENST00000620277 NUP160Q12769 1436 aa20.77■□□□□ 0.92
DKC1-213ENST00000620277 EIF5BO60841 1220 aaKnown RBP20.76■□□□□ 0.91
DKC1-213ENST00000620277 SHANK2Q9UPX8 1470 aa20.76■□□□□ 0.91
DKC1-213ENST00000620277 ADGRF5Q8IZF2 1346 aa20.76■□□□□ 0.91
DKC1-213ENST00000620277 BLMP54132 1417 aaPredicted RBP20.76■□□□□ 0.91
DKC1-213ENST00000620277 WASHC2CQ9Y4E1 1318 aa20.75■□□□□ 0.91
DKC1-213ENST00000620277 TRPM1Q7Z4N2 1603 aa20.75■□□□□ 0.91
DKC1-213ENST00000620277 MORC1Q86VD1 984 aa20.73■□□□□ 0.91
DKC1-213ENST00000620277 GPRASP1Q5JY77 1395 aa20.72■□□□□ 0.91
DKC1-213ENST00000620277 TRAPPC8Q9Y2L5 1435 aa20.72■□□□□ 0.91
DKC1-213ENST00000620277 CDCA8Q53HL2 280 aa20.72■□□□□ 0.91
DKC1-213ENST00000620277 CENPJQ9HC77 1338 aaPredicted RBP20.71■□□□□ 0.91
DKC1-213ENST00000620277 ADCY10Q96PN6 1610 aa20.71■□□□□ 0.91
DKC1-213ENST00000620277 USP35Q9P2H5 1018 aa20.71■□□□□ 0.91
DKC1-213ENST00000620277 GGT6Q6P531 493 aa20.7■□□□□ 0.9
DKC1-213ENST00000620277 WDR7Q9Y4E6 1490 aa20.7■□□□□ 0.9
DKC1-213ENST00000620277 ZMYM4Q5VZL5 1548 aa20.69■□□□□ 0.9
DKC1-213ENST00000620277 CDC42BPBQ9Y5S2 1711 aa20.68■□□□□ 0.9
DKC1-213ENST00000620277 TTC37Q6PGP7 1564 aa20.68■□□□□ 0.9
DKC1-213ENST00000620277 RLBP1P12271 317 aa20.68■□□□□ 0.9
DKC1-213ENST00000620277 ZNF521Q96K83 1311 aa20.68■□□□□ 0.9
DKC1-213ENST00000620277 E9PCH4 1651 aa20.68■□□□□ 0.9
DKC1-213ENST00000620277 WWC1Q8IX03 1113 aa20.68■□□□□ 0.9
DKC1-213ENST00000620277 E9PSI1 815 aa20.66■□□□□ 0.9
DKC1-213ENST00000620277 TCP11L2Q8N4U5 519 aa20.66■□□□□ 0.9
DKC1-213ENST00000620277 GZF1Q9H116 711 aaPredicted RBP20.66■□□□□ 0.9
DKC1-213ENST00000620277 ERCC6L2Q5T890 1561 aa20.65■□□□□ 0.9
DKC1-213ENST00000620277 POGKQ9P215 609 aa20.65■□□□□ 0.9
DKC1-213ENST00000620277 STK26Q9P289 416 aa20.65■□□□□ 0.9
DKC1-213ENST00000620277 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.9
DKC1-213ENST00000620277 TSR2Q969E8 191 aaKnown RBP20.64■□□□□ 0.9
DKC1-213ENST00000620277 U2AF1L5P0DN76 240 aaPredicted RBP20.64■□□□□ 0.89
DKC1-213ENST00000620277 MTHFSP49914 203 aa20.64■□□□□ 0.89
DKC1-213ENST00000620277 U2AF1Q01081 240 aaKnown RBP eCLIP20.64■□□□□ 0.895e-13■■■■■ 27.1
DKC1-213ENST00000620277 PCDHB15Q9Y5E8 787 aa20.64■□□□□ 0.89
DKC1-213ENST00000620277 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
DKC1-213ENST00000620277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.89
DKC1-213ENST00000620277 SCAPERQ9BY12 1400 aa20.6■□□□□ 0.89
DKC1-213ENST00000620277 ARHGEF5Q12774 1597 aa20.59■□□□□ 0.89
DKC1-213ENST00000620277 UGGT1Q9NYU2 1555 aa20.59■□□□□ 0.89
DKC1-213ENST00000620277 NKTRP30414 1462 aaKnown RBP20.58■□□□□ 0.89
DKC1-213ENST00000620277 PDZRN3Q9UPQ7 1066 aa20.58■□□□□ 0.88
DKC1-213ENST00000620277 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
DKC1-213ENST00000620277 FBLN1P23142 703 aa20.57■□□□□ 0.88
DKC1-213ENST00000620277 MFAP1P55081 439 aaKnown RBP20.57■□□□□ 0.88
DKC1-213ENST00000620277 CFAP65Q6ZU64 1925 aaKnown RBP20.56■□□□□ 0.88
DKC1-213ENST00000620277 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
DKC1-213ENST00000620277 RARSP54136 660 aaKnown RBP20.56■□□□□ 0.88
DKC1-213ENST00000620277 MYO5CQ9NQX4 1742 aa20.55■□□□□ 0.88
DKC1-213ENST00000620277 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
DKC1-213ENST00000620277 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
DKC1-213ENST00000620277 TRMT2AQ8IZ69 625 aaKnown RBP20.55■□□□□ 0.88
DKC1-213ENST00000620277 USP19O94966 1318 aa20.54■□□□□ 0.88
DKC1-213ENST00000620277 PREX2Q70Z35 1606 aa20.54■□□□□ 0.88
DKC1-213ENST00000620277 GGNBP2Q9H3C7 697 aa20.53■□□□□ 0.88
DKC1-213ENST00000620277 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.88
DKC1-213ENST00000620277 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.88
DKC1-213ENST00000620277 EIF3AQ14152 1382 aaKnown RBP20.52■□□□□ 0.87
DKC1-213ENST00000620277 KANK1Q14678 1352 aa20.51■□□□□ 0.87
DKC1-213ENST00000620277 ITPRIPQ8IWB1 547 aa20.51■□□□□ 0.87
DKC1-213ENST00000620277 UPF2Q9HAU5 1272 aaKnown RBP20.51■□□□□ 0.87
DKC1-213ENST00000620277 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
DKC1-213ENST00000620277 FOXD4L1Q9NU39 408 aa20.5■□□□□ 0.87
DKC1-213ENST00000620277 DUOX2Q9NRD8 1548 aa20.5■□□□□ 0.87
DKC1-213ENST00000620277 ATP10AO60312 1499 aa20.5■□□□□ 0.87
DKC1-213ENST00000620277 SMC4Q9NTJ3 1288 aa20.5■□□□□ 0.87
DKC1-213ENST00000620277 ELL2O00472 640 aaPredicted RBP20.49■□□□□ 0.87
DKC1-213ENST00000620277 PLCH2O75038 1416 aa20.49■□□□□ 0.87
DKC1-213ENST00000620277 BECN1Q14457 450 aa20.48■□□□□ 0.87
DKC1-213ENST00000620277 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
DKC1-213ENST00000620277 PDE3AQ14432 1141 aa20.48■□□□□ 0.87
DKC1-213ENST00000620277 EXOSC9Q06265 439 aaKnown RBP20.47■□□□□ 0.87
DKC1-213ENST00000620277 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
DKC1-213ENST00000620277 TBC1D2Q9BYX2 928 aa20.45■□□□□ 0.86
DKC1-213ENST00000620277 PIK3C2GO75747 1445 aa20.45■□□□□ 0.86
DKC1-213ENST00000620277 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
DKC1-213ENST00000620277 NOS1P29475 1434 aa20.44■□□□□ 0.86
DKC1-213ENST00000620277 UNC13BO14795 1591 aa20.43■□□□□ 0.86
DKC1-213ENST00000620277 EIF2AK4Q9P2K8 1649 aaKnown RBP20.43■□□□□ 0.86
DKC1-213ENST00000620277 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
DKC1-213ENST00000620277 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
DKC1-213ENST00000620277 PRKCSHP14314 528 aaPredicted RBP20.42■□□□□ 0.86
DKC1-213ENST00000620277 MINK1Q8N4C8 1332 aaPredicted RBP20.42■□□□□ 0.86
DKC1-213ENST00000620277 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
DKC1-213ENST00000620277 RWDD1Q9H446 243 aaPredicted RBP20.42■□□□□ 0.86
DKC1-213ENST00000620277 MAPK8IP3Q9UPT6 1336 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms