RNA–Protein interactions for RNA: ENST00000620149.1

SPTSSB-205, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 BASIC

Gene SPTSSB, Length 231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-205ENST00000620149 CTC1Q2NKJ3 1217 aa4.93□□□□□ -1.62
SPTSSB-205ENST00000620149 RBM33Q96EV2 1170 aaKnown RBP4.93□□□□□ -1.62
SPTSSB-205ENST00000620149 ATP13A2Q9NQ11 1180 aa4.93□□□□□ -1.62
SPTSSB-205ENST00000620149 KCNMA1Q12791 1236 aa4.92□□□□□ -1.62
SPTSSB-205ENST00000620149 PACS2Q86VP3 889 aa4.92□□□□□ -1.62
SPTSSB-205ENST00000620149 BLOC1S3Q6QNY0 202 aa4.91□□□□□ -1.62
SPTSSB-205ENST00000620149 ERBB4Q15303 1308 aa4.91□□□□□ -1.62
SPTSSB-205ENST00000620149 TSR1Q2NL82 804 aaKnown RBP4.9□□□□□ -1.63
SPTSSB-205ENST00000620149 EPAS1Q99814 870 aa4.9□□□□□ -1.63
SPTSSB-205ENST00000620149 RGL2O15211 777 aa4.89□□□□□ -1.63
SPTSSB-205ENST00000620149 LMOD2Q6P5Q4 547 aa4.89□□□□□ -1.63
SPTSSB-205ENST00000620149 PSMG3-AS1Q96PY0 264 aa4.89□□□□□ -1.63
SPTSSB-205ENST00000620149 VEGFBP49765 207 aa4.87□□□□□ -1.63
SPTSSB-205ENST00000620149 TATDN2Q93075 761 aa4.87□□□□□ -1.63
SPTSSB-205ENST00000620149 CDCA7LQ96GN5 454 aa4.87□□□□□ -1.63
SPTSSB-205ENST00000620149 PNMA3Q9UL41 463 aa4.87□□□□□ -1.63
SPTSSB-205ENST00000620149 SLC16A10Q8TF71 515 aa4.86□□□□□ -1.63
SPTSSB-205ENST00000620149 NXF1Q9UBU9 619 aaKnown RBP4.86□□□□□ -1.63
SPTSSB-205ENST00000620149 PCDHB3Q9Y5E6 796 aa4.86□□□□□ -1.63
SPTSSB-205ENST00000620149 NBPF26B4DH59 902 aa4.85□□□□□ -1.63
SPTSSB-205ENST00000620149 EN1Q05925 392 aaPredicted RBP4.85□□□□□ -1.63
SPTSSB-205ENST00000620149 SWT1Q5T5J6 900 aaKnown RBP4.85□□□□□ -1.63
SPTSSB-205ENST00000620149 TMEM151AQ8N4L1 468 aa4.85□□□□□ -1.63
SPTSSB-205ENST00000620149 IRF7Q92985 503 aa4.85□□□□□ -1.63
SPTSSB-205ENST00000620149 H3BM21 787 aa4.84□□□□□ -1.63
SPTSSB-205ENST00000620149 CYP4X1Q8N118 509 aa4.84□□□□□ -1.63
SPTSSB-205ENST00000620149 SENP2Q9HC62 589 aa4.84□□□□□ -1.63
SPTSSB-205ENST00000620149 GDF11O95390 407 aa4.83□□□□□ -1.64
SPTSSB-205ENST00000620149 SMPD1P17405 629 aa4.83□□□□□ -1.64
SPTSSB-205ENST00000620149 PDE4AP27815 886 aa4.83□□□□□ -1.64
SPTSSB-205ENST00000620149 PRSS12P56730 875 aa4.83□□□□□ -1.64
SPTSSB-205ENST00000620149 RASSF7Q02833 373 aa4.83□□□□□ -1.64
SPTSSB-205ENST00000620149 MFSD10Q14728 455 aa4.83□□□□□ -1.64
SPTSSB-205ENST00000620149 DDX27Q96GQ7 796 aaKnown RBP4.83□□□□□ -1.64
SPTSSB-205ENST00000620149 ADH1BP00325 375 aa4.82□□□□□ -1.64
SPTSSB-205ENST00000620149 DDX12PQ92771 950 aa4.82□□□□□ -1.64
SPTSSB-205ENST00000620149 LARP6Q9BRS8 491 aaKnown RBP4.82□□□□□ -1.64
SPTSSB-205ENST00000620149 ECM2O94769 699 aaPredicted RBP4.81□□□□□ -1.64
SPTSSB-205ENST00000620149 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
SPTSSB-205ENST00000620149 NUDT18Q6ZVK8 323 aa4.81□□□□□ -1.64
SPTSSB-205ENST00000620149 MAP3K7O43318 606 aa4.8□□□□□ -1.64
SPTSSB-205ENST00000620149 KIFC2Q96AC6 838 aa4.8□□□□□ -1.64
SPTSSB-205ENST00000620149 PRIM1P49642 420 aaKnown RBP4.79□□□□□ -1.64
SPTSSB-205ENST00000620149 NBR1Q14596 966 aa4.79□□□□□ -1.64
SPTSSB-205ENST00000620149 SLF2Q8IX21 1173 aa4.79□□□□□ -1.64
SPTSSB-205ENST00000620149 NPAS3Q8IXF0 933 aa4.79□□□□□ -1.64
SPTSSB-205ENST00000620149 NECTIN2Q92692 538 aa4.79□□□□□ -1.64
SPTSSB-205ENST00000620149 GPAT2Q6NUI2 795 aa4.78□□□□□ -1.64
SPTSSB-205ENST00000620149 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
SPTSSB-205ENST00000620149 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
SPTSSB-205ENST00000620149 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
SPTSSB-205ENST00000620149 SLC6A16Q9GZN6 736 aa4.78□□□□□ -1.64
SPTSSB-205ENST00000620149 TTC24A2A3L6 582 aaPredicted RBP4.77□□□□□ -1.65
SPTSSB-205ENST00000620149 DPYSL4O14531 572 aa4.77□□□□□ -1.65
SPTSSB-205ENST00000620149 RPIAP49247 311 aa4.77□□□□□ -1.65
SPTSSB-205ENST00000620149 NKX1-1Q15270 411 aaPredicted RBP4.77□□□□□ -1.65
SPTSSB-205ENST00000620149 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
SPTSSB-205ENST00000620149 J3QL48 77 aa4.76□□□□□ -1.65
SPTSSB-205ENST00000620149 HPS1Q92902 700 aa4.76□□□□□ -1.65
SPTSSB-205ENST00000620149 HDGFP51858 240 aaKnown RBP4.75□□□□□ -1.65
SPTSSB-205ENST00000620149 HS6ST3Q8IZP7 471 aa4.75□□□□□ -1.65
SPTSSB-205ENST00000620149 PRR14Q9BWN1 585 aa4.75□□□□□ -1.65
SPTSSB-205ENST00000620149 CDHR5Q9HBB8 845 aa4.75□□□□□ -1.65
SPTSSB-205ENST00000620149 ADAM23O75077 832 aa4.74□□□□□ -1.65
SPTSSB-205ENST00000620149 VSIG8P0DPA2 414 aa4.73□□□□□ -1.65
SPTSSB-205ENST00000620149 BMP1P13497 986 aa4.73□□□□□ -1.65
SPTSSB-205ENST00000620149 PKD2Q13563 968 aa4.73□□□□□ -1.65
SPTSSB-205ENST00000620149 TRIM46Q7Z4K8 759 aa4.73□□□□□ -1.65
SPTSSB-205ENST00000620149 FCF1Q9Y324 198 aaKnown RBP4.72□□□□□ -1.65
SPTSSB-205ENST00000620149 DNMT3AQ9Y6K1 912 aaPredicted RBP4.72□□□□□ -1.65
SPTSSB-205ENST00000620149 ACTN4O43707 911 aaKnown RBP4.71□□□□□ -1.66
SPTSSB-205ENST00000620149 IGHA1P01876 353 aa4.71□□□□□ -1.66
SPTSSB-205ENST00000620149 TTC13Q8NBP0 860 aa4.71□□□□□ -1.66
SPTSSB-205ENST00000620149 SNIP1Q8TAD8 396 aaKnown RBP4.71□□□□□ -1.66
SPTSSB-205ENST00000620149 RNF225M0QZC1 329 aaPredicted RBP4.7□□□□□ -1.66
SPTSSB-205ENST00000620149 WNT7AO00755 349 aa4.7□□□□□ -1.66
SPTSSB-205ENST00000620149 CAMK2BQ13554 666 aa4.7□□□□□ -1.66
SPTSSB-205ENST00000620149 CERKQ8TCT0 537 aa4.7□□□□□ -1.66
SPTSSB-205ENST00000620149 RBM27Q9P2N5 1060 aaKnown RBP4.7□□□□□ -1.66
SPTSSB-205ENST00000620149 CD2BP2O95400 341 aaKnown RBP4.69□□□□□ -1.66
SPTSSB-205ENST00000620149 Q8N3U1 123 aa4.69□□□□□ -1.66
SPTSSB-205ENST00000620149 ADAMTS8Q9UP79 889 aa4.69□□□□□ -1.66
SPTSSB-205ENST00000620149 CFHP08603 1231 aa4.68□□□□□ -1.66
SPTSSB-205ENST00000620149 PADI6Q6TGC4 694 aa4.68□□□□□ -1.66
SPTSSB-205ENST00000620149 MRGPRX2Q96LB1 330 aa4.68□□□□□ -1.66
SPTSSB-205ENST00000620149 EYA1Q99502 592 aa4.68□□□□□ -1.66
SPTSSB-205ENST00000620149 NR1I2O75469 434 aa4.67□□□□□ -1.66
SPTSSB-205ENST00000620149 IRS1P35568 1242 aa4.66□□□□□ -1.66
SPTSSB-205ENST00000620149 KRT76Q01546 638 aa4.66□□□□□ -1.66
SPTSSB-205ENST00000620149 SPSB2Q99619 263 aa4.66□□□□□ -1.66
SPTSSB-205ENST00000620149 KMT5BQ4FZB7 885 aa4.65□□□□□ -1.67
SPTSSB-205ENST00000620149 CADPS2Q86UW7 1296 aa4.65□□□□□ -1.67
SPTSSB-205ENST00000620149 PRDM9Q9NQV7 894 aa4.65□□□□□ -1.67
SPTSSB-205ENST00000620149 ITGB2P05107 769 aa4.64□□□□□ -1.67
SPTSSB-205ENST00000620149 SLC4A3P48751 1232 aa4.64□□□□□ -1.67
SPTSSB-205ENST00000620149 PDIA6Q15084 440 aa4.64□□□□□ -1.67
SPTSSB-205ENST00000620149 SCUBE3Q8IX30 993 aa4.64□□□□□ -1.67
SPTSSB-205ENST00000620149 DNAJC5Q9H3Z4 198 aa4.64□□□□□ -1.67
SPTSSB-205ENST00000620149 SOBPA7XYQ1 873 aa4.63□□□□□ -1.67
SPTSSB-205ENST00000620149 FOXK2Q01167 660 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms