RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 CHMP5Q9NZZ3 219 aa13.95□□□□□ -0.18
PCDHA4-204ENST00000618834 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
PCDHA4-204ENST00000618834 KIAA0754O94854 1291 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 CSB-PGBD3P0DP91 1061 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 ZKSCAN1P17029 563 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 TAF3Q5VWG9 929 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 FRAT2O75474 233 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 NUCB2P80303 420 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 ROCK1Q13464 1354 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 HSP90AB2PQ58FF8 381 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 RAB3GAP2Q9H2M9 1393 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 CPLX1O14810 134 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 CPLX2Q6PUV4 134 aaKnown RBP13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 CCDC73Q6ZRK6 1079 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 INCENPQ9NQS7 918 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 MRE11P49959 708 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
PCDHA4-204ENST00000618834 MYBBP1AQ9BQG0 1328 aaKnown RBP13.92□□□□□ -0.18
PCDHA4-204ENST00000618834 AXDND1Q5T1B0 1012 aaPredicted RBP13.92□□□□□ -0.18
PCDHA4-204ENST00000618834 PDILTQ8N807 584 aa13.92□□□□□ -0.18
PCDHA4-204ENST00000618834 GOLGA6L10A6NI86 522 aa13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 PKD2Q13563 968 aa13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 AMOTL1Q8IY63 956 aa13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 GOLGA6L7A0A1B0GV03 622 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 LETM1O95202 739 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 FOXD1Q16676 465 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 ZKSCAN2Q63HK3 967 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 CRBNQ96SW2 442 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 SMC3Q9UQE7 1217 aa13.89□□□□□ -0.19
PCDHA4-204ENST00000618834 STK11IPQ8N1F8 1099 aa13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 E9PSI1 815 aa13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 TRIM34Q9BYJ4 488 aa13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 CCDC43Q96MW1 224 aaKnown RBP13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 NOL10Q9BSC4 688 aaKnown RBP13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 CT47B1P0C2W7 299 aaPredicted RBP13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 NEXNQ0ZGT2 675 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 TTLL5Q6EMB2 1281 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 ERLIN2O94905 339 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 DYDC1Q8WWB3 177 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 TSPY26PQ9H489 355 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 PLIN1O60240 522 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 USP8P40818 1118 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 KRI1Q8N9T8 703 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 SAFBQ15424 915 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 SMC2O95347 1197 aa13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 TRIM5Q9C035 493 aa13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 FOSBP53539 338 aa13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 NFKBIBQ15653 356 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 EXOC6Q8TAG9 804 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 OFD1O75665 1012 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 NINLQ9Y2I6 1382 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 TRDNQ13061 729 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 SMARCE1Q969G3 411 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 C22orf23Q9BZE7 217 aa13.84□□□□□ -0.19
PCDHA4-204ENST00000618834 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-204ENST00000618834 NUP155O75694 1391 aa13.84□□□□□ -0.19
PCDHA4-204ENST00000618834 ENOX2Q16206 610 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-204ENST00000618834 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 CTDP1Q9Y5B0 961 aaPredicted RBP13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 SKIDA1Q1XH10 827 aa13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 BRMS1Q9HCU9 246 aa13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 EIF3JO75822 258 aaKnown RBP13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 ERICH2A1L162 156 aa13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 ZFYVE27Q5T4F4 411 aa13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 DHX8Q14562 1220 aaKnown RBP13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 GTF2E1P29083 439 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 RAD21O60216 631 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 UQCRHP07919 91 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 MBD3O95983 291 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 MPHOSPH9Q99550 1183 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 SEPT7Q16181 437 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 BCL2L13Q9BXK5 485 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 ABCC8Q09428 1581 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms