RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 CHMP5Q9NZZ3 219 aa13.95□□□□□ -0.18
PCDHA4-204ENST00000618834 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
PCDHA4-204ENST00000618834 KIAA0754O94854 1291 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 CSB-PGBD3P0DP91 1061 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 ZKSCAN1P17029 563 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 TAF3Q5VWG9 929 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 FRAT2O75474 233 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 NUCB2P80303 420 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 ROCK1Q13464 1354 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 HSP90AB2PQ58FF8 381 aa13.94□□□□□ -0.18
PCDHA4-204ENST00000618834 RAB3GAP2Q9H2M9 1393 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 CPLX1O14810 134 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 CPLX2Q6PUV4 134 aaKnown RBP13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 CCDC73Q6ZRK6 1079 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 INCENPQ9NQS7 918 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 MRE11P49959 708 aa13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
PCDHA4-204ENST00000618834 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
PCDHA4-204ENST00000618834 MYBBP1AQ9BQG0 1328 aaKnown RBP13.92□□□□□ -0.18
PCDHA4-204ENST00000618834 AXDND1Q5T1B0 1012 aaPredicted RBP13.92□□□□□ -0.18
PCDHA4-204ENST00000618834 PDILTQ8N807 584 aa13.92□□□□□ -0.18
PCDHA4-204ENST00000618834 GOLGA6L10A6NI86 522 aa13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 PKD2Q13563 968 aa13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 AMOTL1Q8IY63 956 aa13.91□□□□□ -0.18
PCDHA4-204ENST00000618834 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 GOLGA6L7A0A1B0GV03 622 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 LETM1O95202 739 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 FOXD1Q16676 465 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 ZKSCAN2Q63HK3 967 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 CRBNQ96SW2 442 aa13.9□□□□□ -0.18
PCDHA4-204ENST00000618834 SMC3Q9UQE7 1217 aa13.89□□□□□ -0.19
PCDHA4-204ENST00000618834 STK11IPQ8N1F8 1099 aa13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 E9PSI1 815 aa13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 TRIM34Q9BYJ4 488 aa13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 CCDC43Q96MW1 224 aaKnown RBP13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 NOL10Q9BSC4 688 aaKnown RBP13.88□□□□□ -0.19
PCDHA4-204ENST00000618834 CT47B1P0C2W7 299 aaPredicted RBP13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 NEXNQ0ZGT2 675 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 TTLL5Q6EMB2 1281 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 ERLIN2O94905 339 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 DYDC1Q8WWB3 177 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 TSPY26PQ9H489 355 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 PLIN1O60240 522 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 USP8P40818 1118 aa13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 KRI1Q8N9T8 703 aaKnown RBP13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 SAFBQ15424 915 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCDHA4-204ENST00000618834 SMC2O95347 1197 aa13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 TRIM5Q9C035 493 aa13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 FOSBP53539 338 aa13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
PCDHA4-204ENST00000618834 NFKBIBQ15653 356 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 EXOC6Q8TAG9 804 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 OFD1O75665 1012 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 NINLQ9Y2I6 1382 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 TRDNQ13061 729 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 SMARCE1Q969G3 411 aa13.85□□□□□ -0.19
PCDHA4-204ENST00000618834 C22orf23Q9BZE7 217 aa13.84□□□□□ -0.19
PCDHA4-204ENST00000618834 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-204ENST00000618834 NUP155O75694 1391 aa13.84□□□□□ -0.19
PCDHA4-204ENST00000618834 ENOX2Q16206 610 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-204ENST00000618834 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 CTDP1Q9Y5B0 961 aaPredicted RBP13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 SKIDA1Q1XH10 827 aa13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 BRMS1Q9HCU9 246 aa13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.2
PCDHA4-204ENST00000618834 EIF3JO75822 258 aaKnown RBP13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 ERICH2A1L162 156 aa13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 ZFYVE27Q5T4F4 411 aa13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 DHX8Q14562 1220 aaKnown RBP13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 GTF2E1P29083 439 aaPredicted RBP13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
PCDHA4-204ENST00000618834 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 RAD21O60216 631 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 UQCRHP07919 91 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 MBD3O95983 291 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 MPHOSPH9Q99550 1183 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 SEPT7Q16181 437 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 BCL2L13Q9BXK5 485 aa13.81□□□□□ -0.2
PCDHA4-204ENST00000618834 ABCC8Q09428 1581 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms