RNA–Protein interactions for RNA: ENST00000618515.4

KIF3A-208, Transcript of kinesin family member 3A, humanhuman

TSL 5 BASIC

Gene KIF3A, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-208ENST00000618515 CEP152O94986 1710 aa17.11■□□□□ 0.33
KIF3A-208ENST00000618515 C8orf34Q49A92 452 aa17.11■□□□□ 0.33
KIF3A-208ENST00000618515 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
KIF3A-208ENST00000618515 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
KIF3A-208ENST00000618515 TMF1P82094 1093 aa17.1■□□□□ 0.33
KIF3A-208ENST00000618515 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
KIF3A-208ENST00000618515 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
KIF3A-208ENST00000618515 ASXL1Q8IXJ9 1541 aa17.1■□□□□ 0.33
KIF3A-208ENST00000618515 PANK3Q9H999 370 aa17.07■□□□□ 0.32
KIF3A-208ENST00000618515 ZNF777Q9ULD5 760 aaPredicted RBP17.07■□□□□ 0.32
KIF3A-208ENST00000618515 ANO8Q9HCE9 1232 aaPredicted RBP17.06■□□□□ 0.32
KIF3A-208ENST00000618515 PLEKHH1Q9ULM0 1364 aa17.06■□□□□ 0.32
KIF3A-208ENST00000618515 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
KIF3A-208ENST00000618515 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
KIF3A-208ENST00000618515 AAMPQ13685 434 aa17.05■□□□□ 0.32
KIF3A-208ENST00000618515 TRPM2O94759 1503 aa17.05■□□□□ 0.32
KIF3A-208ENST00000618515 SALL2Q9Y467 1007 aaPredicted RBP17.05■□□□□ 0.32
KIF3A-208ENST00000618515 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
KIF3A-208ENST00000618515 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
KIF3A-208ENST00000618515 SYCP2Q9BX26 1530 aa17.04■□□□□ 0.32
KIF3A-208ENST00000618515 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
KIF3A-208ENST00000618515 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
KIF3A-208ENST00000618515 KDM5AP29375 1690 aaKnown RBP17.03■□□□□ 0.32
KIF3A-208ENST00000618515 CDCA8Q53HL2 280 aa17.03■□□□□ 0.32
KIF3A-208ENST00000618515 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
KIF3A-208ENST00000618515 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
KIF3A-208ENST00000618515 PLIN1O60240 522 aa17.02■□□□□ 0.32
KIF3A-208ENST00000618515 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.32
KIF3A-208ENST00000618515 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.32
KIF3A-208ENST00000618515 PPP2R1AP30153 589 aa17.02■□□□□ 0.31
KIF3A-208ENST00000618515 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.31
KIF3A-208ENST00000618515 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
KIF3A-208ENST00000618515 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
KIF3A-208ENST00000618515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17■□□□□ 0.31
KIF3A-208ENST00000618515 PTPRTO14522 1441 aa17■□□□□ 0.31
KIF3A-208ENST00000618515 C20orf194Q5TEA3 1177 aa17■□□□□ 0.31
KIF3A-208ENST00000618515 FAM43AQ8N2R8 423 aa17■□□□□ 0.31
KIF3A-208ENST00000618515 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
KIF3A-208ENST00000618515 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
KIF3A-208ENST00000618515 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
KIF3A-208ENST00000618515 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
KIF3A-208ENST00000618515 NLRP1Q9C000 1473 aa16.97■□□□□ 0.31
KIF3A-208ENST00000618515 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
KIF3A-208ENST00000618515 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
KIF3A-208ENST00000618515 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
KIF3A-208ENST00000618515 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
KIF3A-208ENST00000618515 ARAP3Q8WWN8 1544 aa16.96■□□□□ 0.31
KIF3A-208ENST00000618515 VWDEQ8N2E2 1590 aa16.96■□□□□ 0.31
KIF3A-208ENST00000618515 TET3O43151 1660 aa16.96■□□□□ 0.3
KIF3A-208ENST00000618515 USP19O94966 1318 aa16.95■□□□□ 0.3
KIF3A-208ENST00000618515 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
KIF3A-208ENST00000618515 USP32Q8NFA0 1604 aa16.95■□□□□ 0.3
KIF3A-208ENST00000618515 WDR43Q15061 677 aaKnown RBP eCLIP16.95■□□□□ 0.3
KIF3A-208ENST00000618515 ARHGAP5Q13017 1502 aa16.94■□□□□ 0.3
KIF3A-208ENST00000618515 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
KIF3A-208ENST00000618515 E9PSI1 815 aa16.94■□□□□ 0.3
KIF3A-208ENST00000618515 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
KIF3A-208ENST00000618515 RTEL1-TNFRSF6BF6WH68 1400 aa16.93■□□□□ 0.3
KIF3A-208ENST00000618515 MYOM2P54296 1465 aa16.93■□□□□ 0.3
KIF3A-208ENST00000618515 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
KIF3A-208ENST00000618515 BRPF3Q9ULD4 1205 aa16.92■□□□□ 0.3
KIF3A-208ENST00000618515 ABCC1P33527 1531 aa16.92■□□□□ 0.3
KIF3A-208ENST00000618515 SHPRHQ149N8 1683 aa16.91■□□□□ 0.3
KIF3A-208ENST00000618515 CLTCL1P53675 1640 aa16.91■□□□□ 0.3
KIF3A-208ENST00000618515 FAM69CQ0P6D2 419 aa16.91■□□□□ 0.3
KIF3A-208ENST00000618515 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
KIF3A-208ENST00000618515 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
KIF3A-208ENST00000618515 KANK1Q14678 1352 aa16.9■□□□□ 0.3
KIF3A-208ENST00000618515 SENP3-EIF4A1A0A087X0R7 540 aa16.9■□□□□ 0.3
KIF3A-208ENST00000618515 UBE2Q2Q8WVN8 375 aa16.9■□□□□ 0.3
KIF3A-208ENST00000618515 MAP3K4Q9Y6R4 1608 aa16.88■□□□□ 0.29
KIF3A-208ENST00000618515 IQSEC2Q5JU85 1478 aa16.87■□□□□ 0.29
KIF3A-208ENST00000618515 BECN1Q14457 450 aa16.87■□□□□ 0.29
KIF3A-208ENST00000618515 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
KIF3A-208ENST00000618515 SETBP1Q9Y6X0 1596 aa16.87■□□□□ 0.29
KIF3A-208ENST00000618515 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
KIF3A-208ENST00000618515 PLCH2O75038 1416 aa16.87■□□□□ 0.29
KIF3A-208ENST00000618515 ZC3H13Q5T200 1668 aaKnown RBP16.87■□□□□ 0.29
KIF3A-208ENST00000618515 FRAT2O75474 233 aaPredicted RBP16.86■□□□□ 0.29
KIF3A-208ENST00000618515 L1TD1Q5T7N2 865 aaKnown RBP16.86■□□□□ 0.29
KIF3A-208ENST00000618515 SKAP1Q86WV1 359 aa16.86■□□□□ 0.29
KIF3A-208ENST00000618515 ANTXR1Q9H6X2 564 aa16.85■□□□□ 0.29
KIF3A-208ENST00000618515 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
KIF3A-208ENST00000618515 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
KIF3A-208ENST00000618515 RGL3Q3MIN7 710 aa16.83■□□□□ 0.29
KIF3A-208ENST00000618515 ABCA6Q8N139 1617 aa16.83■□□□□ 0.28
KIF3A-208ENST00000618515 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
KIF3A-208ENST00000618515 CLUAP1Q96AJ1 413 aa16.82■□□□□ 0.28
KIF3A-208ENST00000618515 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
KIF3A-208ENST00000618515 ZFYVE16Q7Z3T8 1539 aa16.82■□□□□ 0.28
KIF3A-208ENST00000618515 SLC4A3P48751 1232 aa16.82■□□□□ 0.28
KIF3A-208ENST00000618515 PMFBP1Q8TBY8 1022 aa16.82■□□□□ 0.28
KIF3A-208ENST00000618515 RTN4Q9NQC3 1192 aaKnown RBP16.81■□□□□ 0.28
KIF3A-208ENST00000618515 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
KIF3A-208ENST00000618515 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
KIF3A-208ENST00000618515 IGHDP01880 384 aa16.8■□□□□ 0.28
KIF3A-208ENST00000618515 KIF1BO60333 1816 aa16.8■□□□□ 0.28
KIF3A-208ENST00000618515 CCDC27Q2M243 656 aa16.8■□□□□ 0.28
KIF3A-208ENST00000618515 ADGRB2O60241 1585 aa16.79■□□□□ 0.28
KIF3A-208ENST00000618515 TBC1D32Q96NH3 1257 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms