RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 IPO8O15397 1037 aaKnown RBP13.85□□□□□ -0.19
POLR2A-209ENST00000617998 FOXO3O43524 673 aa13.85□□□□□ -0.19
POLR2A-209ENST00000617998 BAG6P46379 1132 aa13.85□□□□□ -0.19
POLR2A-209ENST00000617998 APBB1O00213 710 aa13.84□□□□□ -0.19
POLR2A-209ENST00000617998 ZPR1O75312 459 aa13.84□□□□□ -0.19
POLR2A-209ENST00000617998 GPATCH3Q96I76 525 aa13.84□□□□□ -0.19
POLR2A-209ENST00000617998 UHRF1BP1Q6BDS2 1440 aa13.84□□□□□ -0.19
POLR2A-209ENST00000617998 GRIN2AQ12879 1464 aa13.84□□□□□ -0.19
POLR2A-209ENST00000617998 BEGAINQ9BUH8 593 aa13.84□□□□□ -0.19
POLR2A-209ENST00000617998 AMOTL2Q9Y2J4 779 aa13.84□□□□□ -0.19
POLR2A-209ENST00000617998 KTN1Q86UP2 1357 aaKnown RBP13.84□□□□□ -0.19
POLR2A-209ENST00000617998 FAM135AQ9P2D6 1515 aa13.83□□□□□ -0.2
POLR2A-209ENST00000617998 AK7Q96M32 723 aa13.83□□□□□ -0.2
POLR2A-209ENST00000617998 CABP2Q9NPB3 220 aa13.83□□□□□ -0.2
POLR2A-209ENST00000617998 FKBP8Q14318 412 aa13.82□□□□□ -0.2
POLR2A-209ENST00000617998 BICDL1Q6ZP65 573 aa13.82□□□□□ -0.2
POLR2A-209ENST00000617998 LRRC59Q96AG4 307 aaKnown RBP13.82□□□□□ -0.2
POLR2A-209ENST00000617998 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
POLR2A-209ENST00000617998 GNL2Q13823 731 aaKnown RBP13.81□□□□□ -0.2
POLR2A-209ENST00000617998 TNRQ92752 1358 aa13.81□□□□□ -0.2
POLR2A-209ENST00000617998 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
POLR2A-209ENST00000617998 ANO8Q9HCE9 1232 aaPredicted RBP13.81□□□□□ -0.2
POLR2A-209ENST00000617998 STAC3Q96MF2 364 aa13.81□□□□□ -0.2
POLR2A-209ENST00000617998 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
POLR2A-209ENST00000617998 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
POLR2A-209ENST00000617998 FBXO31Q5XUX0 539 aaPredicted RBP13.8□□□□□ -0.2
POLR2A-209ENST00000617998 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
POLR2A-209ENST00000617998 CCDC136Q96JN2 1154 aa13.8□□□□□ -0.2
POLR2A-209ENST00000617998 ASXL2Q76L83 1435 aa13.8□□□□□ -0.2
POLR2A-209ENST00000617998 EPRSP07814 1512 aaKnown RBP13.8□□□□□ -0.2
POLR2A-209ENST00000617998 MARCH6O60337 910 aa13.8□□□□□ -0.2
POLR2A-209ENST00000617998 RBM5P52756 815 aaKnown RBP eCLIP13.79□□□□□ -0.2
POLR2A-209ENST00000617998 HSP90AB1P08238 724 aaKnown RBP13.79□□□□□ -0.2
POLR2A-209ENST00000617998 STK32BQ9NY57 414 aa13.79□□□□□ -0.2
POLR2A-209ENST00000617998 PHLDB1Q86UU1 1377 aa13.79□□□□□ -0.2
POLR2A-209ENST00000617998 GPR162Q16538 588 aa13.79□□□□□ -0.2
POLR2A-209ENST00000617998 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-209ENST00000617998 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
POLR2A-209ENST00000617998 FANCAO15360 1455 aa13.78□□□□□ -0.2
POLR2A-209ENST00000617998 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-209ENST00000617998 RRP7AQ9Y3A4 280 aaKnown RBP13.78□□□□□ -0.2
POLR2A-209ENST00000617998 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
POLR2A-209ENST00000617998 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
POLR2A-209ENST00000617998 NCLP19338 710 aaKnown RBP13.77□□□□□ -0.2
POLR2A-209ENST00000617998 CDK19Q9BWU1 502 aa13.77□□□□□ -0.21
POLR2A-209ENST00000617998 NECTIN2Q92692 538 aa13.77□□□□□ -0.21
POLR2A-209ENST00000617998 KIAA1211Q6ZU35 1233 aa13.76□□□□□ -0.21
POLR2A-209ENST00000617998 RIC3Q7Z5B4 369 aa13.76□□□□□ -0.21
POLR2A-209ENST00000617998 AIMP1Q12904 312 aaKnown RBP13.76□□□□□ -0.21
POLR2A-209ENST00000617998 ANP32BQ92688 251 aaKnown RBP13.76□□□□□ -0.21
POLR2A-209ENST00000617998 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
POLR2A-209ENST00000617998 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
POLR2A-209ENST00000617998 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
POLR2A-209ENST00000617998 ANKRD50Q9ULJ7 1429 aa13.75□□□□□ -0.21
POLR2A-209ENST00000617998 RTEL1-TNFRSF6BF6WH68 1400 aa13.75□□□□□ -0.21
POLR2A-209ENST00000617998 TMOD3Q9NYL9 352 aa13.74□□□□□ -0.21
POLR2A-209ENST00000617998 NPHP3Q7Z494 1330 aa13.74□□□□□ -0.21
POLR2A-209ENST00000617998 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
POLR2A-209ENST00000617998 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
POLR2A-209ENST00000617998 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
POLR2A-209ENST00000617998 PHF14O94880 888 aa13.73□□□□□ -0.21
POLR2A-209ENST00000617998 RXRBP28702 533 aa13.73□□□□□ -0.21
POLR2A-209ENST00000617998 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
POLR2A-209ENST00000617998 PLIN1O60240 522 aa13.72□□□□□ -0.21
POLR2A-209ENST00000617998 ZNF652Q9Y2D9 606 aa13.72□□□□□ -0.21
POLR2A-209ENST00000617998 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
POLR2A-209ENST00000617998 HSPA5P11021 654 aaKnown RBP13.72□□□□□ -0.21
POLR2A-209ENST00000617998 HMMRO75330 724 aa13.72□□□□□ -0.21
POLR2A-209ENST00000617998 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
POLR2A-209ENST00000617998 ANP32AP39687 249 aaKnown RBP13.72□□□□□ -0.21
POLR2A-209ENST00000617998 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
POLR2A-209ENST00000617998 ST20-MTHFSA0A0A6YYL1 179 aa13.71□□□□□ -0.21
POLR2A-209ENST00000617998 MTHFSP49914 203 aa13.71□□□□□ -0.21
POLR2A-209ENST00000617998 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
POLR2A-209ENST00000617998 CFAP70Q5T0N1 1121 aa13.71□□□□□ -0.22
POLR2A-209ENST00000617998 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.22
POLR2A-209ENST00000617998 ZNF622Q969S3 477 aaKnown RBP eCLIP13.71□□□□□ -0.227e-7■■■□□ 16.1
POLR2A-209ENST00000617998 TMOD2Q9NZR1 351 aa13.71□□□□□ -0.22
POLR2A-209ENST00000617998 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
POLR2A-209ENST00000617998 STARD3NLO95772 234 aa13.7□□□□□ -0.22
POLR2A-209ENST00000617998 GGNBP2Q9H3C7 697 aa13.7□□□□□ -0.22
POLR2A-209ENST00000617998 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
POLR2A-209ENST00000617998 USP21Q9UK80 565 aa13.7□□□□□ -0.22
POLR2A-209ENST00000617998 ZNF530Q6P9A1 599 aaPredicted RBP13.7□□□□□ -0.22
POLR2A-209ENST00000617998 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-209ENST00000617998 RFC4P35249 363 aa13.69□□□□□ -0.22
POLR2A-209ENST00000617998 LRRFIP1Q32MZ4 808 aaKnown RBP13.69□□□□□ -0.22
POLR2A-209ENST00000617998 MPRIPQ6WCQ1 1025 aa13.69□□□□□ -0.22
POLR2A-209ENST00000617998 PRM3Q9NNZ6 103 aa13.69□□□□□ -0.22
POLR2A-209ENST00000617998 TSPYL4Q9UJ04 414 aa13.69□□□□□ -0.22
POLR2A-209ENST00000617998 MCCP23508 829 aa13.69□□□□□ -0.22
POLR2A-209ENST00000617998 IKQ13123 557 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-209ENST00000617998 SLC4A3P48751 1232 aa13.69□□□□□ -0.22
POLR2A-209ENST00000617998 IQGAP2Q13576 1575 aa13.68□□□□□ -0.22
POLR2A-209ENST00000617998 WWC3Q9ULE0 1092 aa13.68□□□□□ -0.22
POLR2A-209ENST00000617998 C19orf44Q9H6X5 657 aa13.68□□□□□ -0.22
POLR2A-209ENST00000617998 TIMELESSQ9UNS1 1208 aa13.68□□□□□ -0.22
POLR2A-209ENST00000617998 CUX1P39880 1505 aa13.67□□□□□ -0.22
POLR2A-209ENST00000617998 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
POLR2A-209ENST00000617998 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms