RNA–Protein interactions for RNA: ENST00000617797.1

CUL1-204, Transcript of cullin 1, humanhuman

TSL 1 (best) BASIC

Gene CUL1, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-204ENST00000617797 MADDQ8WXG6 1647 aa8.93□□□□□ -0.98
CUL1-204ENST00000617797 TRHP20396 242 aaPredicted RBP8.93□□□□□ -0.98
CUL1-204ENST00000617797 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
CUL1-204ENST00000617797 ZNF518AQ6AHZ1 1483 aa8.93□□□□□ -0.98
CUL1-204ENST00000617797 KANK1Q14678 1352 aa8.92□□□□□ -0.98
CUL1-204ENST00000617797 PTPRTO14522 1441 aa8.92□□□□□ -0.98
CUL1-204ENST00000617797 CD109Q6YHK3 1445 aa8.92□□□□□ -0.98
CUL1-204ENST00000617797 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
CUL1-204ENST00000617797 KIF1BO60333 1816 aa8.92□□□□□ -0.98
CUL1-204ENST00000617797 NBPF1Q3BBV0 1214 aa8.92□□□□□ -0.98
CUL1-204ENST00000617797 KIF3BO15066 747 aa8.91□□□□□ -0.98
CUL1-204ENST00000617797 RGL2O15211 777 aa8.91□□□□□ -0.98
CUL1-204ENST00000617797 HECW2Q9P2P5 1572 aa8.91□□□□□ -0.98
CUL1-204ENST00000617797 MRS2Q9HD23 443 aa8.91□□□□□ -0.98
CUL1-204ENST00000617797 IQGAP1P46940 1657 aa8.91□□□□□ -0.98
CUL1-204ENST00000617797 PPRC1Q5VV67 1664 aaKnown RBP8.9□□□□□ -0.98
CUL1-204ENST00000617797 POGZQ7Z3K3 1410 aa8.9□□□□□ -0.98
CUL1-204ENST00000617797 EFCAB6Q5THR3 1501 aa8.9□□□□□ -0.98
CUL1-204ENST00000617797 ABCA6Q8N139 1617 aa8.89□□□□□ -0.99
CUL1-204ENST00000617797 IFT172Q9UG01 1749 aa8.89□□□□□ -0.99
CUL1-204ENST00000617797 COL17A1Q9UMD9 1497 aaPredicted RBP8.89□□□□□ -0.99
CUL1-204ENST00000617797 FRMPD1Q5SYB0 1578 aa8.89□□□□□ -0.99
CUL1-204ENST00000617797 NEURL4Q96JN8 1562 aa8.89□□□□□ -0.99
CUL1-204ENST00000617797 CFAP65Q6ZU64 1925 aaKnown RBP8.88□□□□□ -0.99
CUL1-204ENST00000617797 KIAA1210Q9ULL0 1709 aa8.88□□□□□ -0.99
CUL1-204ENST00000617797 MROH2AA6NES4 1674 aa8.88□□□□□ -0.99
CUL1-204ENST00000617797 MLH3Q9UHC1 1453 aa8.88□□□□□ -0.99
CUL1-204ENST00000617797 FAM9BQ8IZU0 186 aa8.88□□□□□ -0.99
CUL1-204ENST00000617797 LMTK2Q8IWU2 1503 aa8.88□□□□□ -0.99
CUL1-204ENST00000617797 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
CUL1-204ENST00000617797 SPINK5Q9NQ38 1064 aaPredicted RBP8.88□□□□□ -0.99
CUL1-204ENST00000617797 UGGT1Q9NYU2 1555 aa8.87□□□□□ -0.99
CUL1-204ENST00000617797 CNGB1Q14028 1251 aaPredicted RBP8.87□□□□□ -0.99
CUL1-204ENST00000617797 MAP3K4Q9Y6R4 1608 aa8.87□□□□□ -0.99
CUL1-204ENST00000617797 NEO1Q92859 1461 aa8.87□□□□□ -0.99
CUL1-204ENST00000617797 RICTORQ6R327 1708 aa8.86□□□□□ -0.99
CUL1-204ENST00000617797 TESK2Q96S53 571 aa8.86□□□□□ -0.99
CUL1-204ENST00000617797 DISP3Q9P2K9 1392 aa8.85□□□□□ -0.99
CUL1-204ENST00000617797 NEFLP07196 543 aa8.85□□□□□ -0.99
CUL1-204ENST00000617797 STAC3Q96MF2 364 aa8.85□□□□□ -0.99
CUL1-204ENST00000617797 DIP2CQ9Y2E4 1556 aa8.85□□□□□ -0.99
CUL1-204ENST00000617797 RIMBP3CA6NJZ7 1639 aa8.84□□□□□ -0.99
CUL1-204ENST00000617797 RIMBP3BA6NNM3 1639 aa8.84□□□□□ -0.99
CUL1-204ENST00000617797 RIMBP3Q9UFD9 1639 aa8.84□□□□□ -0.99
CUL1-204ENST00000617797 CAMSAP1Q5T5Y3 1602 aa8.84□□□□□ -0.99
CUL1-204ENST00000617797 KTN1Q86UP2 1357 aaKnown RBP8.84□□□□□ -1
CUL1-204ENST00000617797 MYOM2P54296 1465 aa8.83□□□□□ -1
CUL1-204ENST00000617797 ZBED9Q6R2W3 1325 aa8.83□□□□□ -1
CUL1-204ENST00000617797 GLI2P10070 1586 aa8.83□□□□□ -1
CUL1-204ENST00000617797 PPLO60437 1756 aa8.83□□□□□ -1
CUL1-204ENST00000617797 SCAF11Q99590 1463 aaKnown RBP8.83□□□□□ -1
CUL1-204ENST00000617797 ADGRB3O60242 1522 aa8.82□□□□□ -1
CUL1-204ENST00000617797 SIGLEC1Q9BZZ2 1709 aa8.82□□□□□ -1
CUL1-204ENST00000617797 CHGAP10645 457 aaKnown RBP8.82□□□□□ -1
CUL1-204ENST00000617797 TMF1P82094 1093 aa8.82□□□□□ -1
CUL1-204ENST00000617797 PLCD3Q8N3E9 789 aa8.82□□□□□ -1
CUL1-204ENST00000617797 STAG3Q9UJ98 1225 aa8.82□□□□□ -1
CUL1-204ENST00000617797 ABCC3O15438 1527 aa8.82□□□□□ -1
CUL1-204ENST00000617797 NBR1Q14596 966 aa8.82□□□□□ -1
CUL1-204ENST00000617797 RALBP1Q15311 655 aa8.82□□□□□ -1
CUL1-204ENST00000617797 MYBBP1AQ9BQG0 1328 aaKnown RBP8.81□□□□□ -1
CUL1-204ENST00000617797 BRD4O60885 1362 aaPredicted RBP8.81□□□□□ -1
CUL1-204ENST00000617797 NPATQ14207 1427 aa8.81□□□□□ -1
CUL1-204ENST00000617797 MYOM1P52179 1685 aa8.81□□□□□ -1
CUL1-204ENST00000617797 PARD3Q8TEW0 1356 aa8.81□□□□□ -1
CUL1-204ENST00000617797 PER1O15534 1290 aaPredicted RBP8.81□□□□□ -1
CUL1-204ENST00000617797 RAPGEF3O95398 923 aa8.81□□□□□ -1
CUL1-204ENST00000617797 GGT6Q6P531 493 aa8.81□□□□□ -1
CUL1-204ENST00000617797 ZC3H13Q5T200 1668 aaKnown RBP8.81□□□□□ -1
CUL1-204ENST00000617797 KDM5AP29375 1690 aaKnown RBP8.8□□□□□ -1
CUL1-204ENST00000617797 TMC1Q8TDI8 760 aa8.8□□□□□ -1
CUL1-204ENST00000617797 PNISRQ8TF01 805 aaKnown RBP8.8□□□□□ -1
CUL1-204ENST00000617797 TSPOAP1O95153 1857 aa8.8□□□□□ -1
CUL1-204ENST00000617797 DIP2BQ9P265 1576 aa8.8□□□□□ -1
CUL1-204ENST00000617797 CYB5RLQ6IPT4 315 aa8.8□□□□□ -1
CUL1-204ENST00000617797 SYNMO15061 1565 aa8.79□□□□□ -1
CUL1-204ENST00000617797 ZBTB12Q9Y330 459 aaPredicted RBP8.79□□□□□ -1
CUL1-204ENST00000617797 NRXN1Q9ULB1 1477 aa8.79□□□□□ -1
CUL1-204ENST00000617797 PIK3C2BO00750 1634 aa8.79□□□□□ -1
CUL1-204ENST00000617797 MYO3AQ8NEV4 1616 aa8.79□□□□□ -1
CUL1-204ENST00000617797 CAPN15O75808 1086 aa8.79□□□□□ -1
CUL1-204ENST00000617797 PANK3Q9H999 370 aa8.79□□□□□ -1
CUL1-204ENST00000617797 ADGRF5Q8IZF2 1346 aa8.79□□□□□ -1
CUL1-204ENST00000617797 LRPPRCP42704 1394 aaKnown RBP8.78□□□□□ -1
CUL1-204ENST00000617797 DNAJC5Q9H3Z4 198 aa8.78□□□□□ -1
CUL1-204ENST00000617797 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
CUL1-204ENST00000617797 NOS1P29475 1434 aa8.78□□□□□ -1
CUL1-204ENST00000617797 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
CUL1-204ENST00000617797 WASHC2CQ9Y4E1 1318 aa8.78□□□□□ -1
CUL1-204ENST00000617797 YEATS2Q9ULM3 1422 aa8.77□□□□□ -1
CUL1-204ENST00000617797 SETBP1Q9Y6X0 1596 aa8.77□□□□□ -1.01
CUL1-204ENST00000617797 ZMYM4Q5VZL5 1548 aa8.77□□□□□ -1.01
CUL1-204ENST00000617797 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1.01
CUL1-204ENST00000617797 NLRP13Q86W25 1043 aa8.77□□□□□ -1.01
CUL1-204ENST00000617797 CC2D1BQ5T0F9 858 aaKnown RBP8.76□□□□□ -1.01
CUL1-204ENST00000617797 PREX1Q8TCU6 1659 aa8.76□□□□□ -1.01
CUL1-204ENST00000617797 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
CUL1-204ENST00000617797 IRX6P78412 446 aaPredicted RBP8.75□□□□□ -1.01
CUL1-204ENST00000617797 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
CUL1-204ENST00000617797 QRICH2Q9H0J4 1663 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms