RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 NEXMIFQ5QGS0 1516 aa23.06■■□□□ 1.28
SNAP47-213ENST00000617596 KDM4FA0A1W2PPD8 638 aa23.06■■□□□ 1.28
SNAP47-213ENST00000617596 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
SNAP47-213ENST00000617596 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
SNAP47-213ENST00000617596 MYOM2P54296 1465 aa23.04■■□□□ 1.28
SNAP47-213ENST00000617596 PPLO60437 1756 aa23.04■■□□□ 1.28
SNAP47-213ENST00000617596 RALGAPBQ86X10 1494 aa23.03■■□□□ 1.28
SNAP47-213ENST00000617596 ROCK2O75116 1388 aaKnown RBP23.03■■□□□ 1.28
SNAP47-213ENST00000617596 STAC3Q96MF2 364 aa23.03■■□□□ 1.28
SNAP47-213ENST00000617596 CFAP70Q5T0N1 1121 aa23.02■■□□□ 1.28
SNAP47-213ENST00000617596 CARD11Q9BXL7 1154 aa23.02■■□□□ 1.28
SNAP47-213ENST00000617596 VGFO15240 615 aaPredicted RBP23.02■■□□□ 1.28
SNAP47-213ENST00000617596 MYO3AQ8NEV4 1616 aa23.01■■□□□ 1.27
SNAP47-213ENST00000617596 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
SNAP47-213ENST00000617596 TRPM1Q7Z4N2 1603 aa23.01■■□□□ 1.27
SNAP47-213ENST00000617596 RIMS2Q9UQ26 1411 aa23.01■■□□□ 1.27
SNAP47-213ENST00000617596 UBR1Q8IWV7 1749 aa23■■□□□ 1.27
SNAP47-213ENST00000617596 NRXN1Q9ULB1 1477 aa22.99■■□□□ 1.27
SNAP47-213ENST00000617596 HSPA5P11021 654 aaKnown RBP22.98■■□□□ 1.27
SNAP47-213ENST00000617596 PIK3C2GO75747 1445 aa22.98■■□□□ 1.27
SNAP47-213ENST00000617596 TMEM2Q9UHN6 1383 aa22.97■■□□□ 1.27
SNAP47-213ENST00000617596 ZFYVE9O95405 1425 aa22.96■■□□□ 1.27
SNAP47-213ENST00000617596 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.272e-6■■■■■ 38.7
SNAP47-213ENST00000617596 CEP170BQ9Y4F5 1589 aaPredicted RBP22.94■■□□□ 1.26
SNAP47-213ENST00000617596 LTKP29376 864 aa22.94■■□□□ 1.26
SNAP47-213ENST00000617596 USP47Q96K76 1375 aa22.93■■□□□ 1.26
SNAP47-213ENST00000617596 TMEM132EQ6IEE7 984 aa22.93■■□□□ 1.26
SNAP47-213ENST00000617596 THEMISQ8N1K5 641 aaPredicted RBP22.93■■□□□ 1.26
SNAP47-213ENST00000617596 C14orf93Q9H972 538 aaKnown RBP22.93■■□□□ 1.26
SNAP47-213ENST00000617596 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
SNAP47-213ENST00000617596 KDM5AP29375 1690 aaKnown RBP22.92■■□□□ 1.26
SNAP47-213ENST00000617596 TXNDC2Q86VQ3 553 aa22.91■■□□□ 1.26
SNAP47-213ENST00000617596 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNAP47-213ENST00000617596 SETD1BQ9UPS6 1966 aaKnown RBP22.88■■□□□ 1.25
SNAP47-213ENST00000617596 HDGFP51858 240 aaKnown RBP22.88■■□□□ 1.25
SNAP47-213ENST00000617596 BCANQ96GW7 911 aa22.88■■□□□ 1.25
SNAP47-213ENST00000617596 ST20-MTHFSA0A0A6YYL1 179 aa22.87■■□□□ 1.25
SNAP47-213ENST00000617596 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
SNAP47-213ENST00000617596 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
SNAP47-213ENST00000617596 SLIT1O75093 1534 aa22.86■■□□□ 1.25
SNAP47-213ENST00000617596 ARHGAP23Q9P227 1491 aa22.86■■□□□ 1.25
SNAP47-213ENST00000617596 KIAA1210Q9ULL0 1709 aa22.85■■□□□ 1.25
SNAP47-213ENST00000617596 ZNF142P52746 1687 aaPredicted RBP22.84■■□□□ 1.25
SNAP47-213ENST00000617596 ADGRB1O14514 1584 aa22.83■■□□□ 1.24
SNAP47-213ENST00000617596 TRAK1Q9UPV9 953 aa22.82■■□□□ 1.24
SNAP47-213ENST00000617596 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
SNAP47-213ENST00000617596 STK26Q9P289 416 aa22.82■■□□□ 1.24
SNAP47-213ENST00000617596 C11orf95C9JLR9 678 aaPredicted RBP22.81■■□□□ 1.24
SNAP47-213ENST00000617596 SCAF11Q99590 1463 aaKnown RBP22.8■■□□□ 1.24
SNAP47-213ENST00000617596 ASXL1Q8IXJ9 1541 aa22.8■■□□□ 1.24
SNAP47-213ENST00000617596 LAMC1P11047 1609 aa22.8■■□□□ 1.24
SNAP47-213ENST00000617596 NRXN3Q9Y4C0 1643 aa22.8■■□□□ 1.24
SNAP47-213ENST00000617596 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
SNAP47-213ENST00000617596 PLEKHG1Q9ULL1 1385 aa22.79■■□□□ 1.24
SNAP47-213ENST00000617596 SETBP1Q9Y6X0 1596 aa22.79■■□□□ 1.24
SNAP47-213ENST00000617596 IQGAP1P46940 1657 aa22.78■■□□□ 1.24
SNAP47-213ENST00000617596 HSPA2P54652 639 aa22.78■■□□□ 1.24
SNAP47-213ENST00000617596 ANKLE2Q86XL3 938 aa22.78■■□□□ 1.24
SNAP47-213ENST00000617596 METP08581 1390 aa22.77■■□□□ 1.24
SNAP47-213ENST00000617596 ADAMTS13Q76LX8 1427 aa22.76■■□□□ 1.23
SNAP47-213ENST00000617596 WASHC2AQ641Q2 1341 aa22.75■■□□□ 1.23
SNAP47-213ENST00000617596 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
SNAP47-213ENST00000617596 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
SNAP47-213ENST00000617596 TESK2Q96S53 571 aa22.73■■□□□ 1.23
SNAP47-213ENST00000617596 YTHDC2Q9H6S0 1430 aaKnown RBP22.73■■□□□ 1.23
SNAP47-213ENST00000617596 SETD1AO15047 1707 aaKnown RBP22.73■■□□□ 1.23
SNAP47-213ENST00000617596 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
SNAP47-213ENST00000617596 EIF3AQ14152 1382 aaKnown RBP22.71■■□□□ 1.23
SNAP47-213ENST00000617596 SAFB2Q14151 953 aaKnown RBP eCLIP22.71■■□□□ 1.23
SNAP47-213ENST00000617596 DDX10Q13206 875 aaKnown RBP22.7■■□□□ 1.22
SNAP47-213ENST00000617596 KIF7Q2M1P5 1343 aa22.7■■□□□ 1.22
SNAP47-213ENST00000617596 LMTK3Q96Q04 1460 aa22.69■■□□□ 1.22
SNAP47-213ENST00000617596 MED14O60244 1454 aa22.68■■□□□ 1.22
SNAP47-213ENST00000617596 CENPJQ9HC77 1338 aaPredicted RBP22.68■■□□□ 1.22
SNAP47-213ENST00000617596 DIEXFQ68CQ4 756 aaKnown RBP22.67■■□□□ 1.22
SNAP47-213ENST00000617596 CCDC7Q96M83 1385 aa22.67■■□□□ 1.22
SNAP47-213ENST00000617596 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
SNAP47-213ENST00000617596 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
SNAP47-213ENST00000617596 TBX22Q9Y458 520 aa22.67■■□□□ 1.22
SNAP47-213ENST00000617596 GTF3C3Q9Y5Q9 886 aa22.66■■□□□ 1.22
SNAP47-213ENST00000617596 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
SNAP47-213ENST00000617596 WAPLQ7Z5K2 1190 aa22.65■■□□□ 1.22
SNAP47-213ENST00000617596 NPHP4O75161 1426 aaPredicted RBP22.64■■□□□ 1.22
SNAP47-213ENST00000617596 PTPRUQ92729 1446 aa22.64■■□□□ 1.21
SNAP47-213ENST00000617596 ARHGEF28Q8N1W1 1705 aaKnown RBP22.63■■□□□ 1.21
SNAP47-213ENST00000617596 POGKQ9P215 609 aa22.63■■□□□ 1.21
SNAP47-213ENST00000617596 PLEKHH1Q9ULM0 1364 aa22.63■■□□□ 1.21
SNAP47-213ENST00000617596 ABCC11Q96J66 1382 aa22.62■■□□□ 1.21
SNAP47-213ENST00000617596 TMF1P82094 1093 aa22.62■■□□□ 1.21
SNAP47-213ENST00000617596 AMOTL2Q9Y2J4 779 aa22.61■■□□□ 1.21
SNAP47-213ENST00000617596 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
SNAP47-213ENST00000617596 ROBO2Q9HCK4 1378 aa22.59■■□□□ 1.21
SNAP47-213ENST00000617596 MINK1Q8N4C8 1332 aaPredicted RBP22.59■■□□□ 1.21
SNAP47-213ENST00000617596 QRICH2Q9H0J4 1663 aa22.58■■□□□ 1.2
SNAP47-213ENST00000617596 DIP2AQ14689 1571 aa22.57■■□□□ 1.2
SNAP47-213ENST00000617596 KCNA6P17658 529 aa22.55■■□□□ 1.2
SNAP47-213ENST00000617596 TECPR2O15040 1411 aa22.55■■□□□ 1.2
SNAP47-213ENST00000617596 DLC1Q96QB1 1528 aa22.55■■□□□ 1.2
SNAP47-213ENST00000617596 SBNO2Q9Y2G9 1366 aa22.54■■□□□ 1.2
SNAP47-213ENST00000617596 CPS1P31327 1500 aa22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms