RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 OFD1O75665 1012 aa7.31□□□□□ -1.24
RFX3-212ENST00000617270 PDILTQ8N807 584 aa7.31□□□□□ -1.24
RFX3-212ENST00000617270 VPS37DQ86XT2 251 aa7.31□□□□□ -1.24
RFX3-212ENST00000617270 TSPYL1Q9H0U9 437 aa7.31□□□□□ -1.24
RFX3-212ENST00000617270 TERF2IPQ9NYB0 399 aa7.31□□□□□ -1.24
RFX3-212ENST00000617270 R3HCC1Q9Y3T6 440 aaKnown RBP7.31□□□□□ -1.24
RFX3-212ENST00000617270 CCDC173Q0VFZ6 552 aa7.3□□□□□ -1.24
RFX3-212ENST00000617270 KLHL34Q8N239 644 aa7.3□□□□□ -1.24
RFX3-212ENST00000617270 FAM43AQ8N2R8 423 aa7.3□□□□□ -1.24
RFX3-212ENST00000617270 CCDC180Q9P1Z9 1646 aa7.3□□□□□ -1.24
RFX3-212ENST00000617270 SASS6Q6UVJ0 657 aa7.3□□□□□ -1.24
RFX3-212ENST00000617270 CWC15Q9P013 229 aaKnown RBP7.3□□□□□ -1.24
RFX3-212ENST00000617270 FAM161AQ3B820 660 aa7.3□□□□□ -1.24
RFX3-212ENST00000617270 CCDC73Q6ZRK6 1079 aa7.29□□□□□ -1.24
RFX3-212ENST00000617270 EIF4G1Q04637 1599 aaKnown RBP7.29□□□□□ -1.24
RFX3-212ENST00000617270 CGNL1Q0VF96 1302 aa7.29□□□□□ -1.24
RFX3-212ENST00000617270 PLIN1O60240 522 aa7.29□□□□□ -1.24
RFX3-212ENST00000617270 KDM4AO75164 1064 aa7.29□□□□□ -1.24
RFX3-212ENST00000617270 IFIT2P09913 472 aaKnown RBP7.29□□□□□ -1.24
RFX3-212ENST00000617270 TRDNQ13061 729 aa7.29□□□□□ -1.24
RFX3-212ENST00000617270 LRRFIP1Q32MZ4 808 aaKnown RBP7.29□□□□□ -1.24
RFX3-212ENST00000617270 REC8O95072 547 aa7.29□□□□□ -1.24
RFX3-212ENST00000617270 AXDND1Q5T1B0 1012 aaPredicted RBP7.29□□□□□ -1.24
RFX3-212ENST00000617270 RUFY2Q8WXA3 655 aa7.29□□□□□ -1.24
RFX3-212ENST00000617270 C9orf78Q9NZ63 289 aaPredicted RBP7.29□□□□□ -1.24
RFX3-212ENST00000617270 PDE4AP27815 886 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 MTMR7Q9Y216 660 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 ERICH2A1L162 156 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 EIF2S2P20042 333 aaKnown RBP7.28□□□□□ -1.24
RFX3-212ENST00000617270 TTC5Q8N0Z6 440 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 FYB1O15117 783 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 ANKRD62A6NC57 917 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 NEXNQ0ZGT2 675 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 TMEM132AQ24JP5 1023 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
RFX3-212ENST00000617270 C1orf141Q5JVX7 400 aa7.27□□□□□ -1.24
RFX3-212ENST00000617270 SAFBQ15424 915 aaKnown RBP eCLIP7.27□□□□□ -1.25
RFX3-212ENST00000617270 CENPQQ7L2Z9 268 aaPredicted RBP7.27□□□□□ -1.25
RFX3-212ENST00000617270 SYTL4Q96C24 671 aaPredicted RBP7.27□□□□□ -1.25
RFX3-212ENST00000617270 MYO6Q9UM54 1294 aa7.27□□□□□ -1.25
RFX3-212ENST00000617270 ENOX2Q16206 610 aaKnown RBP7.27□□□□□ -1.25
RFX3-212ENST00000617270 SMC3Q9UQE7 1217 aa7.27□□□□□ -1.25
RFX3-212ENST00000617270 OLFM4Q6UX06 510 aa7.26□□□□□ -1.25
RFX3-212ENST00000617270 NEFHP12036 1026 aa7.26□□□□□ -1.25
RFX3-212ENST00000617270 ZRSR2Q15696 482 aaKnown RBP7.26□□□□□ -1.25
RFX3-212ENST00000617270 RNF20Q5VTR2 975 aa7.26□□□□□ -1.25
RFX3-212ENST00000617270 ZKSCAN2Q63HK3 967 aa7.26□□□□□ -1.25
RFX3-212ENST00000617270 ERCC4Q92889 916 aaPredicted RBP7.26□□□□□ -1.25
RFX3-212ENST00000617270 COG6Q9Y2V7 657 aa7.26□□□□□ -1.25
RFX3-212ENST00000617270 EEA1Q15075 1411 aa7.26□□□□□ -1.25
RFX3-212ENST00000617270 RNF214Q8ND24 703 aa7.25□□□□□ -1.25
RFX3-212ENST00000617270 NAT10Q9H0A0 1025 aaKnown RBP7.25□□□□□ -1.25
RFX3-212ENST00000617270 SMC2O95347 1197 aa7.25□□□□□ -1.25
RFX3-212ENST00000617270 LEKR1Q6ZMV7 388 aa7.25□□□□□ -1.25
RFX3-212ENST00000617270 NLRP13Q86W25 1043 aa7.25□□□□□ -1.25
RFX3-212ENST00000617270 TEFQ10587 303 aa7.25□□□□□ -1.25
RFX3-212ENST00000617270 KIF27Q86VH2 1401 aa7.25□□□□□ -1.25
RFX3-212ENST00000617270 CCDC66A2RUB6 948 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 CT47B1P0C2W7 299 aaPredicted RBP7.24□□□□□ -1.25
RFX3-212ENST00000617270 IKQ13123 557 aaPredicted RBP7.24□□□□□ -1.25
RFX3-212ENST00000617270 MAPK8IP2Q13387 824 aaPredicted RBP7.24□□□□□ -1.25
RFX3-212ENST00000617270 BRMS1Q9HCU9 246 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
RFX3-212ENST00000617270 EXOC6Q8TAG9 804 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 CCDC39Q9UFE4 941 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 NUP155O75694 1391 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 SETD5Q9C0A6 1442 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 RALYLQ86SE5 291 aaKnown RBP7.24□□□□□ -1.25
RFX3-212ENST00000617270 PDE3BQ13370 1112 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 EVA1CP58658 441 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 FMNL2Q96PY5 1086 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 SDF4Q9BRK5 362 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 TRIM5Q9C035 493 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 EID1Q9Y6B2 187 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 MYO15BQ96JP2 1530 aa7.24□□□□□ -1.25
RFX3-212ENST00000617270 G3BP1Q13283 466 aaKnown RBP eCLIP7.23□□□□□ -1.25
RFX3-212ENST00000617270 CENPHQ9H3R5 247 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 RBM33Q96EV2 1170 aaKnown RBP7.23□□□□□ -1.25
RFX3-212ENST00000617270 ATP2B1P20020 1258 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 NASPP49321 788 aaPredicted RBP7.23□□□□□ -1.25
RFX3-212ENST00000617270 CCDC27Q2M243 656 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 TAX1BP1Q86VP1 789 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 ERCC6Q03468 1493 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 CRBNQ96SW2 442 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 CEP164Q9UPV0 1460 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 GOLGA6L10A6NI86 522 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 SEPT7Q16181 437 aaKnown RBP7.23□□□□□ -1.25
RFX3-212ENST00000617270 KIAA0754O94854 1291 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 SYCP1Q15431 976 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 WASHC4Q2M389 1173 aa7.23□□□□□ -1.25
RFX3-212ENST00000617270 BAZ1BQ9UIG0 1483 aaKnown RBP7.22□□□□□ -1.25
RFX3-212ENST00000617270 CHMP5Q9NZZ3 219 aa7.22□□□□□ -1.25
RFX3-212ENST00000617270 ARHGAP35Q9NRY4 1499 aa7.22□□□□□ -1.25
RFX3-212ENST00000617270 GOLGA6L7A0A1B0GV03 622 aa7.22□□□□□ -1.25
RFX3-212ENST00000617270 NEUROD6Q96NK8 337 aa7.22□□□□□ -1.25
RFX3-212ENST00000617270 KRT18P05783 430 aaKnown RBP7.22□□□□□ -1.25
RFX3-212ENST00000617270 CDK5RAP3Q96JB5 506 aa7.22□□□□□ -1.25
RFX3-212ENST00000617270 COG3Q96JB2 828 aa7.22□□□□□ -1.25
RFX3-212ENST00000617270 WRNQ14191 1432 aaPredicted RBP eCLIP7.22□□□□□ -1.25
RFX3-212ENST00000617270 FKBP5Q13451 457 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms