RNA–Protein interactions for RNA: ENST00000617020.1

PCDH9-206, Transcript of protocadherin 9, humanhuman

TSL 5

Gene PCDH9, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-206ENST00000617020 PIP4K2BP78356 416 aa10.77□□□□□ -0.69
PCDH9-206ENST00000617020 RIOK3O14730 519 aaKnown RBP10.75□□□□□ -0.69
PCDH9-206ENST00000617020 PTGER2P43116 358 aa10.75□□□□□ -0.69
PCDH9-206ENST00000617020 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-206ENST00000617020 ZNF142P52746 1687 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-206ENST00000617020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.74□□□□□ -0.69
PCDH9-206ENST00000617020 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
PCDH9-206ENST00000617020 ALKQ9UM73 1620 aa10.73□□□□□ -0.69
PCDH9-206ENST00000617020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-206ENST00000617020 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-206ENST00000617020 TRAPPC8Q9Y2L5 1435 aa10.73□□□□□ -0.69
PCDH9-206ENST00000617020 RGS17Q9UGC6 210 aaPredicted RBP10.72□□□□□ -0.69
PCDH9-206ENST00000617020 MYO3AQ8NEV4 1616 aa10.72□□□□□ -0.69
PCDH9-206ENST00000617020 VGFO15240 615 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-206ENST00000617020 ARSIQ5FYB1 569 aa10.71□□□□□ -0.69
PCDH9-206ENST00000617020 SRCAPQ6ZRS2 3230 aa10.71□□□□□ -0.69
PCDH9-206ENST00000617020 NCKAP5LQ9HCH0 1330 aa10.71□□□□□ -0.69
PCDH9-206ENST00000617020 DIP2CQ9Y2E4 1556 aa10.71□□□□□ -0.69
PCDH9-206ENST00000617020 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
PCDH9-206ENST00000617020 MROH2AA6NES4 1674 aa10.69□□□□□ -0.7
PCDH9-206ENST00000617020 ABCA6Q8N139 1617 aa10.69□□□□□ -0.7
PCDH9-206ENST00000617020 REREQ9P2R6 1566 aa10.69□□□□□ -0.7
PCDH9-206ENST00000617020 SCAPERQ9BY12 1400 aa10.69□□□□□ -0.7
PCDH9-206ENST00000617020 CPS1P31327 1500 aa10.68□□□□□ -0.7
PCDH9-206ENST00000617020 NUP153P49790 1475 aaKnown RBP10.68□□□□□ -0.7
PCDH9-206ENST00000617020 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
PCDH9-206ENST00000617020 TCOF1Q13428 1488 aaKnown RBP10.68□□□□□ -0.7
PCDH9-206ENST00000617020 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
PCDH9-206ENST00000617020 TOM1O60784 492 aa10.68□□□□□ -0.7
PCDH9-206ENST00000617020 MYO5CQ9NQX4 1742 aa10.67□□□□□ -0.7
PCDH9-206ENST00000617020 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.7
PCDH9-206ENST00000617020 SAMD9Q5K651 1589 aa10.67□□□□□ -0.7
PCDH9-206ENST00000617020 KDM5CP41229 1560 aa10.66□□□□□ -0.7
PCDH9-206ENST00000617020 CEP170BQ9Y4F5 1589 aaPredicted RBP10.66□□□□□ -0.7
PCDH9-206ENST00000617020 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
PCDH9-206ENST00000617020 ANKRD13DQ6ZTN6 518 aa10.66□□□□□ -0.7
PCDH9-206ENST00000617020 AGLP35573 1532 aa10.66□□□□□ -0.7
PCDH9-206ENST00000617020 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
PCDH9-206ENST00000617020 FBXO22Q8NEZ5 403 aa10.64□□□□□ -0.71
PCDH9-206ENST00000617020 NPATQ14207 1427 aa10.64□□□□□ -0.71
PCDH9-206ENST00000617020 NLRP6P59044 892 aa10.63□□□□□ -0.71
PCDH9-206ENST00000617020 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
PCDH9-206ENST00000617020 PTPRKQ15262 1439 aa10.63□□□□□ -0.71
PCDH9-206ENST00000617020 ZNF518AQ6AHZ1 1483 aa10.62□□□□□ -0.71
PCDH9-206ENST00000617020 NEURL4Q96JN8 1562 aa10.62□□□□□ -0.71
PCDH9-206ENST00000617020 CNTLNQ9NXG0 1405 aa10.62□□□□□ -0.71
PCDH9-206ENST00000617020 PKD2Q13563 968 aa10.62□□□□□ -0.71
PCDH9-206ENST00000617020 POTEAQ6S8J7 498 aa10.62□□□□□ -0.71
PCDH9-206ENST00000617020 RNF17Q9BXT8 1623 aaKnown RBP10.62□□□□□ -0.71
PCDH9-206ENST00000617020 SHANK2Q9UPX8 1470 aa10.61□□□□□ -0.71
PCDH9-206ENST00000617020 CLTCQ00610 1675 aaKnown RBP10.61□□□□□ -0.71
PCDH9-206ENST00000617020 FAM9AQ8IZU1 332 aaPredicted RBP10.61□□□□□ -0.71
PCDH9-206ENST00000617020 ESF1Q9H501 851 aaKnown RBP10.6□□□□□ -0.71
PCDH9-206ENST00000617020 VWDEQ8N2E2 1590 aa10.6□□□□□ -0.71
PCDH9-206ENST00000617020 STRCP1A6NGW2 1772 aa10.6□□□□□ -0.71
PCDH9-206ENST00000617020 PLCH2O75038 1416 aa10.59□□□□□ -0.71
PCDH9-206ENST00000617020 KIF3CO14782 793 aa10.59□□□□□ -0.71
PCDH9-206ENST00000617020 PLEKHD1A6NEE1 506 aa10.58□□□□□ -0.72
PCDH9-206ENST00000617020 DNMT1P26358 1616 aaKnown RBP10.58□□□□□ -0.72
PCDH9-206ENST00000617020 PBX2P40425 430 aa10.57□□□□□ -0.72
PCDH9-206ENST00000617020 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
PCDH9-206ENST00000617020 KIDINS220Q9ULH0 1771 aa10.56□□□□□ -0.72
PCDH9-206ENST00000617020 SYNMO15061 1565 aa10.56□□□□□ -0.72
PCDH9-206ENST00000617020 C2orf72A6NCS6 295 aa10.55□□□□□ -0.72
PCDH9-206ENST00000617020 NUDT7P0C024 238 aa10.55□□□□□ -0.72
PCDH9-206ENST00000617020 MFRPQ9BY79 579 aa10.55□□□□□ -0.72
PCDH9-206ENST00000617020 ITSN2Q9NZM3 1697 aa10.54□□□□□ -0.72
PCDH9-206ENST00000617020 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
PCDH9-206ENST00000617020 MLH3Q9UHC1 1453 aa10.54□□□□□ -0.72
PCDH9-206ENST00000617020 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
PCDH9-206ENST00000617020 AFAP1Q8N556 730 aa10.53□□□□□ -0.72
PCDH9-206ENST00000617020 KIF14Q15058 1648 aa10.53□□□□□ -0.72
PCDH9-206ENST00000617020 XIRP1Q702N8 1843 aaKnown RBP10.53□□□□□ -0.72
PCDH9-206ENST00000617020 ZMYM3Q14202 1370 aa10.52□□□□□ -0.72
PCDH9-206ENST00000617020 UPF1Q92900 1129 aaKnown RBP eCLIP10.52□□□□□ -0.73
PCDH9-206ENST00000617020 PRXQ9BXM0 1461 aa10.52□□□□□ -0.73
PCDH9-206ENST00000617020 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.73
PCDH9-206ENST00000617020 ARHGAP5Q13017 1502 aa10.52□□□□□ -0.73
PCDH9-206ENST00000617020 A2ML1A8K2U0 1454 aa10.51□□□□□ -0.73
PCDH9-206ENST00000617020 SLC34A2O95436 690 aa10.51□□□□□ -0.73
PCDH9-206ENST00000617020 TAOK2Q9UL54 1235 aa10.51□□□□□ -0.73
PCDH9-206ENST00000617020 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
PCDH9-206ENST00000617020 STK24Q9Y6E0 443 aa10.51□□□□□ -0.73
PCDH9-206ENST00000617020 LRRC7Q96NW7 1537 aa10.51□□□□□ -0.73
PCDH9-206ENST00000617020 IQGAP1P46940 1657 aa10.5□□□□□ -0.73
PCDH9-206ENST00000617020 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
PCDH9-206ENST00000617020 EFCAB2Q5VUJ9 269 aa10.49□□□□□ -0.73
PCDH9-206ENST00000617020 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
PCDH9-206ENST00000617020 ABCC1P33527 1531 aa10.48□□□□□ -0.73
PCDH9-206ENST00000617020 DEPDC5O75140 1603 aa10.47□□□□□ -0.73
PCDH9-206ENST00000617020 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
PCDH9-206ENST00000617020 ROBO1Q9Y6N7 1651 aa10.45□□□□□ -0.74
PCDH9-206ENST00000617020 PREX2Q70Z35 1606 aa10.45□□□□□ -0.74
PCDH9-206ENST00000617020 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
PCDH9-206ENST00000617020 PLXNC1O60486 1568 aa10.44□□□□□ -0.74
PCDH9-206ENST00000617020 STK25O00506 426 aa10.44□□□□□ -0.74
PCDH9-206ENST00000617020 ZC3H13Q5T200 1668 aaKnown RBP10.44□□□□□ -0.74
PCDH9-206ENST00000617020 MED14O60244 1454 aa10.43□□□□□ -0.74
PCDH9-206ENST00000617020 NPHP4O75161 1426 aaPredicted RBP10.43□□□□□ -0.74
PCDH9-206ENST00000617020 ADGRD1Q6QNK2 874 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms