RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CEP152O94986 1710 aa15.47■□□□□ 0.07
PCDHGA9-202ENST00000616887 CCDC136Q96JN2 1154 aa15.47■□□□□ 0.07
PCDHGA9-202ENST00000616887 ABCA6Q8N139 1617 aa15.47■□□□□ 0.07
PCDHGA9-202ENST00000616887 RNF17Q9BXT8 1623 aaKnown RBP15.46■□□□□ 0.07
PCDHGA9-202ENST00000616887 ADGRF5Q8IZF2 1346 aa15.45■□□□□ 0.06
PCDHGA9-202ENST00000616887 IRX6P78412 446 aaPredicted RBP15.45■□□□□ 0.06
PCDHGA9-202ENST00000616887 ARHGEF40Q8TER5 1519 aa15.45■□□□□ 0.06
PCDHGA9-202ENST00000616887 DIP2CQ9Y2E4 1556 aa15.44■□□□□ 0.06
PCDHGA9-202ENST00000616887 NPATQ14207 1427 aa15.44■□□□□ 0.06
PCDHGA9-202ENST00000616887 CHGAP10645 457 aaKnown RBP15.44■□□□□ 0.06
PCDHGA9-202ENST00000616887 LAMC1P11047 1609 aa15.44■□□□□ 0.06
PCDHGA9-202ENST00000616887 CFAP70Q5T0N1 1121 aa15.43■□□□□ 0.06
PCDHGA9-202ENST00000616887 NBR1Q14596 966 aa15.43■□□□□ 0.06
PCDHGA9-202ENST00000616887 CFAP65Q6ZU64 1925 aaKnown RBP15.43■□□□□ 0.06
PCDHGA9-202ENST00000616887 LMTK2Q8IWU2 1503 aa15.42■□□□□ 0.06
PCDHGA9-202ENST00000616887 MROH2AA6NES4 1674 aa15.42■□□□□ 0.06
PCDHGA9-202ENST00000616887 PER1O15534 1290 aaPredicted RBP15.41■□□□□ 0.06
PCDHGA9-202ENST00000616887 CC2D1BQ5T0F9 858 aaKnown RBP15.41■□□□□ 0.06
PCDHGA9-202ENST00000616887 PANK3Q9H999 370 aa15.41■□□□□ 0.06
PCDHGA9-202ENST00000616887 WASHC2CQ9Y4E1 1318 aa15.41■□□□□ 0.06
PCDHGA9-202ENST00000616887 TMF1P82094 1093 aa15.41■□□□□ 0.06
PCDHGA9-202ENST00000616887 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
PCDHGA9-202ENST00000616887 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
PCDHGA9-202ENST00000616887 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
PCDHGA9-202ENST00000616887 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
PCDHGA9-202ENST00000616887 ZBED9Q6R2W3 1325 aa15.39■□□□□ 0.05
PCDHGA9-202ENST00000616887 NUTM2DQ5VT03 806 aaPredicted RBP15.39■□□□□ 0.05
PCDHGA9-202ENST00000616887 PNISRQ8TF01 805 aaKnown RBP15.39■□□□□ 0.05
PCDHGA9-202ENST00000616887 SCAF11Q99590 1463 aaKnown RBP15.38■□□□□ 0.05
PCDHGA9-202ENST00000616887 IQGAP1P46940 1657 aa15.38■□□□□ 0.05
PCDHGA9-202ENST00000616887 MYBBP1AQ9BQG0 1328 aaKnown RBP15.38■□□□□ 0.05
PCDHGA9-202ENST00000616887 ABCC3O15438 1527 aa15.38■□□□□ 0.05
PCDHGA9-202ENST00000616887 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
PCDHGA9-202ENST00000616887 NOS1P29475 1434 aa15.37■□□□□ 0.05
PCDHGA9-202ENST00000616887 KTN1Q86UP2 1357 aaKnown RBP15.35■□□□□ 0.05
PCDHGA9-202ENST00000616887 PARD3Q8TEW0 1356 aa15.35■□□□□ 0.05
PCDHGA9-202ENST00000616887 ZC3H13Q5T200 1668 aaKnown RBP15.35■□□□□ 0.05
PCDHGA9-202ENST00000616887 RALBP1Q15311 655 aa15.34■□□□□ 0.05
PCDHGA9-202ENST00000616887 ADGRB3O60242 1522 aa15.34■□□□□ 0.05
PCDHGA9-202ENST00000616887 AGLP35573 1532 aa15.34■□□□□ 0.05
PCDHGA9-202ENST00000616887 KIF1BO60333 1816 aa15.34■□□□□ 0.05
PCDHGA9-202ENST00000616887 MYOM2P54296 1465 aa15.34■□□□□ 0.05
PCDHGA9-202ENST00000616887 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
PCDHGA9-202ENST00000616887 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.33■□□□□ 0.04
PCDHGA9-202ENST00000616887 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
PCDHGA9-202ENST00000616887 IL27Q8NEV9 243 aa15.32■□□□□ 0.04
PCDHGA9-202ENST00000616887 STAC3Q96MF2 364 aa15.32■□□□□ 0.04
PCDHGA9-202ENST00000616887 NEURL4Q96JN8 1562 aa15.32■□□□□ 0.04
PCDHGA9-202ENST00000616887 BRD4O60885 1362 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA9-202ENST00000616887 TMEM132EQ6IEE7 984 aa15.31■□□□□ 0.04
PCDHGA9-202ENST00000616887 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
PCDHGA9-202ENST00000616887 IFT172Q9UG01 1749 aa15.31■□□□□ 0.04
PCDHGA9-202ENST00000616887 CAMSAP1Q5T5Y3 1602 aa15.31■□□□□ 0.04
PCDHGA9-202ENST00000616887 NOP58Q9Y2X3 529 aaKnown RBP15.31■□□□□ 0.04
PCDHGA9-202ENST00000616887 NLRP13Q86W25 1043 aa15.3■□□□□ 0.04
PCDHGA9-202ENST00000616887 PAK3O75914 559 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA9-202ENST00000616887 MLECQ14165 292 aa15.3■□□□□ 0.04
PCDHGA9-202ENST00000616887 LRPPRCP42704 1394 aaKnown RBP15.29■□□□□ 0.04
PCDHGA9-202ENST00000616887 ARHGAP31Q2M1Z3 1444 aa15.29■□□□□ 0.04
PCDHGA9-202ENST00000616887 SYNMO15061 1565 aa15.29■□□□□ 0.04
PCDHGA9-202ENST00000616887 TRAK1Q9UPV9 953 aa15.29■□□□□ 0.04
PCDHGA9-202ENST00000616887 NRXN1Q9ULB1 1477 aa15.29■□□□□ 0.04
PCDHGA9-202ENST00000616887 EIF3AQ14152 1382 aaKnown RBP15.28■□□□□ 0.04
PCDHGA9-202ENST00000616887 IDI1Q13907 227 aa15.28■□□□□ 0.04
PCDHGA9-202ENST00000616887 PIK3C2GO75747 1445 aa15.27■□□□□ 0.04
PCDHGA9-202ENST00000616887 FBXO31Q5XUX0 539 aaPredicted RBP15.27■□□□□ 0.03
PCDHGA9-202ENST00000616887 ERVK-7P63135 1459 aa15.26■□□□□ 0.03
PCDHGA9-202ENST00000616887 KIAA1210Q9ULL0 1709 aa15.26■□□□□ 0.03
PCDHGA9-202ENST00000616887 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA9-202ENST00000616887 MYOM1P52179 1685 aa15.25■□□□□ 0.03
PCDHGA9-202ENST00000616887 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
PCDHGA9-202ENST00000616887 PPLO60437 1756 aa15.24■□□□□ 0.03
PCDHGA9-202ENST00000616887 C14orf93Q9H972 538 aaKnown RBP15.23■□□□□ 0.03
PCDHGA9-202ENST00000616887 ADGRB1O14514 1584 aa15.22■□□□□ 0.03
PCDHGA9-202ENST00000616887 RTL5Q5HYW3 569 aaPredicted RBP15.22■□□□□ 0.03
PCDHGA9-202ENST00000616887 NUDCQ9Y266 331 aa15.22■□□□□ 0.03
PCDHGA9-202ENST00000616887 PIK3C2BO00750 1634 aa15.21■□□□□ 0.03
PCDHGA9-202ENST00000616887 SMG6Q86US8 1419 aaKnown RBP15.21■□□□□ 0.03
PCDHGA9-202ENST00000616887 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA9-202ENST00000616887 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
PCDHGA9-202ENST00000616887 CARD14Q9BXL6 1004 aa15.21■□□□□ 0.02
PCDHGA9-202ENST00000616887 NEXMIFQ5QGS0 1516 aa15.21■□□□□ 0.02
PCDHGA9-202ENST00000616887 ADAMTSL3P82987 1691 aa15.2■□□□□ 0.02
PCDHGA9-202ENST00000616887 SAFB2Q14151 953 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCDHGA9-202ENST00000616887 PPP2R1AP30153 589 aa15.2■□□□□ 0.02
PCDHGA9-202ENST00000616887 KDM5AP29375 1690 aaKnown RBP15.19■□□□□ 0.02
PCDHGA9-202ENST00000616887 FER1L4A9Z1Z3 1794 aa15.19■□□□□ 0.02
PCDHGA9-202ENST00000616887 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
PCDHGA9-202ENST00000616887 KDM4FA0A1W2PPD8 638 aa15.18■□□□□ 0.02
PCDHGA9-202ENST00000616887 SLC52A1Q9NWF4 448 aa15.18■□□□□ 0.02
PCDHGA9-202ENST00000616887 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
PCDHGA9-202ENST00000616887 ASXL1Q8IXJ9 1541 aa15.17■□□□□ 0.02
PCDHGA9-202ENST00000616887 SETBP1Q9Y6X0 1596 aa15.17■□□□□ 0.02
PCDHGA9-202ENST00000616887 CDCA7LQ96GN5 454 aa15.17■□□□□ 0.02
PCDHGA9-202ENST00000616887 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
PCDHGA9-202ENST00000616887 STK26Q9P289 416 aa15.17■□□□□ 0.02
PCDHGA9-202ENST00000616887 ADAMTS8Q9UP79 889 aa15.17■□□□□ 0.02
PCDHGA9-202ENST00000616887 CLTCQ00610 1675 aaKnown RBP15.16■□□□□ 0.02
PCDHGA9-202ENST00000616887 B4GALNT3Q6L9W6 998 aa15.16■□□□□ 0.02
PCDHGA9-202ENST00000616887 SLC12A5Q9H2X9 1139 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms