RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 NPATQ14207 1427 aa29.4■■■□□ 2.3
CLN5-203ENST00000616833 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.3
CLN5-203ENST00000616833 KIF1BO60333 1816 aa29.39■■■□□ 2.3
CLN5-203ENST00000616833 NOS1P29475 1434 aa29.39■■■□□ 2.3
CLN5-203ENST00000616833 SMG6Q86US8 1419 aaKnown RBP29.39■■■□□ 2.3
CLN5-203ENST00000616833 KNSTRNQ9Y448 316 aa29.38■■■□□ 2.29
CLN5-203ENST00000616833 TMEM132EQ6IEE7 984 aa29.37■■■□□ 2.29
CLN5-203ENST00000616833 MLH3Q9UHC1 1453 aa29.36■■■□□ 2.29
CLN5-203ENST00000616833 TRAK1Q9UPV9 953 aa29.35■■■□□ 2.29
CLN5-203ENST00000616833 CFAP74Q9C0B2 1584 aa29.35■■■□□ 2.29
CLN5-203ENST00000616833 MAP3K4Q9Y6R4 1608 aa29.34■■■□□ 2.29
CLN5-203ENST00000616833 PPP4R2Q9NY27 417 aa29.34■■■□□ 2.29
CLN5-203ENST00000616833 YEATS2Q9ULM3 1422 aa29.31■■■□□ 2.28
CLN5-203ENST00000616833 CDCA7LQ96GN5 454 aa29.31■■■□□ 2.28
CLN5-203ENST00000616833 STAC3Q96MF2 364 aa29.29■■■□□ 2.28
CLN5-203ENST00000616833 EIF3AQ14152 1382 aaKnown RBP29.28■■■□□ 2.28
CLN5-203ENST00000616833 AMER1Q5JTC6 1135 aaPredicted RBP29.28■■■□□ 2.28
CLN5-203ENST00000616833 LMTK2Q8IWU2 1503 aa29.27■■■□□ 2.28
CLN5-203ENST00000616833 FAM69CQ0P6D2 419 aa29.27■■■□□ 2.28
CLN5-203ENST00000616833 PPP2R1AP30153 589 aa29.26■■■□□ 2.27
CLN5-203ENST00000616833 RBM19Q9Y4C8 960 aaKnown RBP29.26■■■□□ 2.27
CLN5-203ENST00000616833 ABCC3O15438 1527 aa29.26■■■□□ 2.27
CLN5-203ENST00000616833 CDCA8Q53HL2 280 aa29.25■■■□□ 2.27
CLN5-203ENST00000616833 MYOM2P54296 1465 aa29.25■■■□□ 2.27
CLN5-203ENST00000616833 ADAMTS8Q9UP79 889 aa29.24■■■□□ 2.27
CLN5-203ENST00000616833 NEO1Q92859 1461 aa29.24■■■□□ 2.27
CLN5-203ENST00000616833 IFT172Q9UG01 1749 aa29.23■■■□□ 2.27
CLN5-203ENST00000616833 DIP2CQ9Y2E4 1556 aa29.23■■■□□ 2.27
CLN5-203ENST00000616833 ADGRB3O60242 1522 aa29.23■■■□□ 2.27
CLN5-203ENST00000616833 SIGLEC1Q9BZZ2 1709 aa29.22■■■□□ 2.27
CLN5-203ENST00000616833 ERVK-7P63135 1459 aa29.21■■■□□ 2.27
CLN5-203ENST00000616833 MYOM1P52179 1685 aa29.21■■■□□ 2.27
CLN5-203ENST00000616833 SAFB2Q14151 953 aaKnown RBP eCLIP29.2■■■□□ 2.26
CLN5-203ENST00000616833 CARD14Q9BXL6 1004 aa29.19■■■□□ 2.26
CLN5-203ENST00000616833 KIAA1210Q9ULL0 1709 aa29.19■■■□□ 2.26
CLN5-203ENST00000616833 TSPOAP1O95153 1857 aa29.18■■■□□ 2.26
CLN5-203ENST00000616833 CAMSAP1Q5T5Y3 1602 aa29.18■■■□□ 2.26
CLN5-203ENST00000616833 IDI1Q13907 227 aa29.17■■■□□ 2.26
CLN5-203ENST00000616833 SYNMO15061 1565 aa29.17■■■□□ 2.26
CLN5-203ENST00000616833 CENPJQ9HC77 1338 aaPredicted RBP29.17■■■□□ 2.26
CLN5-203ENST00000616833 ERICH6BQ5W0A0 696 aa29.16■■■□□ 2.26
CLN5-203ENST00000616833 RICTORQ6R327 1708 aa29.16■■■□□ 2.26
CLN5-203ENST00000616833 KDM5AP29375 1690 aaKnown RBP29.16■■■□□ 2.26
CLN5-203ENST00000616833 C14orf93Q9H972 538 aaKnown RBP29.15■■■□□ 2.26
CLN5-203ENST00000616833 TNNT2P45379 298 aaPredicted RBP29.14■■■□□ 2.26
CLN5-203ENST00000616833 FBXO31Q5XUX0 539 aaPredicted RBP29.14■■■□□ 2.26
CLN5-203ENST00000616833 NRXN1Q9ULB1 1477 aa29.13■■■□□ 2.25
CLN5-203ENST00000616833 WDR43Q15061 677 aaKnown RBP eCLIP29.13■■■□□ 2.25
CLN5-203ENST00000616833 CCDC146Q8IYE0 955 aa29.13■■■□□ 2.25
CLN5-203ENST00000616833 ASXL1Q8IXJ9 1541 aa29.13■■■□□ 2.25
CLN5-203ENST00000616833 NEURL4Q96JN8 1562 aa29.13■■■□□ 2.25
CLN5-203ENST00000616833 PPLO60437 1756 aa29.13■■■□□ 2.25
CLN5-203ENST00000616833 PIK3C2GO75747 1445 aa29.12■■■□□ 2.25
CLN5-203ENST00000616833 SLC12A5Q9H2X9 1139 aa29.12■■■□□ 2.25
CLN5-203ENST00000616833 STK26Q9P289 416 aa29.12■■■□□ 2.25
CLN5-203ENST00000616833 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
CLN5-203ENST00000616833 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
CLN5-203ENST00000616833 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
CLN5-203ENST00000616833 RNF123Q5XPI4 1314 aa29.11■■■□□ 2.25
CLN5-203ENST00000616833 MLECQ14165 292 aa29.11■■■□□ 2.25
CLN5-203ENST00000616833 RCAN3Q9UKA8 241 aa29.11■■■□□ 2.25
CLN5-203ENST00000616833 PLIN1O60240 522 aa29.08■■■□□ 2.25
CLN5-203ENST00000616833 CCDC136Q96JN2 1154 aa29.08■■■□□ 2.25
CLN5-203ENST00000616833 BLMP54132 1417 aaPredicted RBP29.07■■■□□ 2.24
CLN5-203ENST00000616833 RRP1P56182 461 aaKnown RBP29.05■■■□□ 2.24
CLN5-203ENST00000616833 EXOC6Q8TAG9 804 aa29.04■■■□□ 2.24
CLN5-203ENST00000616833 ADGRB1O14514 1584 aa29.02■■■□□ 2.24
CLN5-203ENST00000616833 VGFO15240 615 aaPredicted RBP29.01■■■□□ 2.23
CLN5-203ENST00000616833 PLEKHH1Q9ULM0 1364 aa29.01■■■□□ 2.23
CLN5-203ENST00000616833 QRICH2Q9H0J4 1663 aa29■■■□□ 2.23
CLN5-203ENST00000616833 CABP2Q9NPB3 220 aa28.99■■■□□ 2.23
CLN5-203ENST00000616833 RPGRIP1LQ68CZ1 1315 aa28.99■■■□□ 2.23
CLN5-203ENST00000616833 MYO5BQ9ULV0 1848 aa28.99■■■□□ 2.23
CLN5-203ENST00000616833 PDE3BQ13370 1112 aa28.98■■■□□ 2.23
CLN5-203ENST00000616833 NEXMIFQ5QGS0 1516 aa28.98■■■□□ 2.23
CLN5-203ENST00000616833 NSD3Q9BZ95 1437 aa28.97■■■□□ 2.23
CLN5-203ENST00000616833 SETBP1Q9Y6X0 1596 aa28.97■■■□□ 2.23
CLN5-203ENST00000616833 PIK3C2BO00750 1634 aa28.96■■■□□ 2.23
CLN5-203ENST00000616833 DIP2BQ9P265 1576 aa28.96■■■□□ 2.23
CLN5-203ENST00000616833 MYO3AQ8NEV4 1616 aa28.95■■■□□ 2.22
CLN5-203ENST00000616833 STAG3Q9UJ98 1225 aa28.95■■■□□ 2.22
CLN5-203ENST00000616833 GLI2P10070 1586 aa28.95■■■□□ 2.22
CLN5-203ENST00000616833 APAF1O14727 1248 aa28.93■■■□□ 2.22
CLN5-203ENST00000616833 ZMYM4Q5VZL5 1548 aa28.93■■■□□ 2.22
CLN5-203ENST00000616833 MORC1Q86VD1 984 aa28.92■■■□□ 2.22
CLN5-203ENST00000616833 SBNO2Q9Y2G9 1366 aa28.9■■■□□ 2.22
CLN5-203ENST00000616833 SLC52A1Q9NWF4 448 aa28.9■■■□□ 2.22
CLN5-203ENST00000616833 SLC24A1O60721 1099 aa28.9■■■□□ 2.22
CLN5-203ENST00000616833 MINK1Q8N4C8 1332 aaPredicted RBP28.9■■■□□ 2.22
CLN5-203ENST00000616833 ZC3H13Q5T200 1668 aaKnown RBP28.89■■■□□ 2.22
CLN5-203ENST00000616833 ARHGAP31Q2M1Z3 1444 aa28.89■■■□□ 2.22
CLN5-203ENST00000616833 PREX1Q8TCU6 1659 aa28.89■■■□□ 2.21
CLN5-203ENST00000616833 NPC1L1Q9UHC9 1359 aa28.88■■■□□ 2.21
CLN5-203ENST00000616833 SPINK5Q9NQ38 1064 aaPredicted RBP28.87■■■□□ 2.21
CLN5-203ENST00000616833 SRPK2P78362 688 aaKnown RBP28.86■■■□□ 2.21
CLN5-203ENST00000616833 C20orf194Q5TEA3 1177 aa28.86■■■□□ 2.21
CLN5-203ENST00000616833 NEUROD2Q15784 382 aa28.85■■■□□ 2.21
CLN5-203ENST00000616833 EVC2Q86UK5 1308 aa28.85■■■□□ 2.21
CLN5-203ENST00000616833 PRAM1Q96QH2 718 aa28.84■■■□□ 2.21
CLN5-203ENST00000616833 ARHGEF28Q8N1W1 1705 aaKnown RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms