RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 ZNF516Q92618 1163 aa8.88□□□□□ -0.99
CBWD1-224ENST00000616803 ITGBL1O95965 494 aaPredicted RBP8.87□□□□□ -0.99
CBWD1-224ENST00000616803 DNAJB2P25686 324 aa8.87□□□□□ -0.99
CBWD1-224ENST00000616803 NKX2-3Q8TAU0 364 aa8.84□□□□□ -0.99
CBWD1-224ENST00000616803 IRF6O14896 467 aa8.83□□□□□ -1
CBWD1-224ENST00000616803 OATP04181 439 aa8.83□□□□□ -1
CBWD1-224ENST00000616803 ZC3H15Q8WU90 426 aaKnown RBP8.83□□□□□ -1
CBWD1-224ENST00000616803 MTRQ99707 1265 aa8.83□□□□□ -1
CBWD1-224ENST00000616803 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
CBWD1-224ENST00000616803 HDGFP51858 240 aaKnown RBP8.81□□□□□ -1
CBWD1-224ENST00000616803 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
CBWD1-224ENST00000616803 SLF2Q8IX21 1173 aa8.81□□□□□ -1
CBWD1-224ENST00000616803 REPIN1Q9BWE0 567 aaKnown RBP8.81□□□□□ -1
CBWD1-224ENST00000616803 COPS2P61201 443 aa8.8□□□□□ -1
CBWD1-224ENST00000616803 KCNC4Q03721 635 aa8.8□□□□□ -1
CBWD1-224ENST00000616803 MAP2K5Q13163 448 aa8.8□□□□□ -1
CBWD1-224ENST00000616803 SLC24A1O60721 1099 aa8.79□□□□□ -1
CBWD1-224ENST00000616803 ZMYND10O75800 440 aa8.79□□□□□ -1
CBWD1-224ENST00000616803 CCDC102AQ96A19 550 aa8.79□□□□□ -1
CBWD1-224ENST00000616803 BLOC1S3Q6QNY0 202 aa8.78□□□□□ -1
CBWD1-224ENST00000616803 Q6ZNB5 142 aa8.78□□□□□ -1
CBWD1-224ENST00000616803 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
CBWD1-224ENST00000616803 BARGINQ6ZT62 677 aa8.77□□□□□ -1.01
CBWD1-224ENST00000616803 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
CBWD1-224ENST00000616803 CFHP08603 1231 aa8.76□□□□□ -1.01
CBWD1-224ENST00000616803 PUS10Q3MIT2 529 aaKnown RBP8.76□□□□□ -1.01
CBWD1-224ENST00000616803 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
CBWD1-224ENST00000616803 MDM2Q00987 491 aaPredicted RBP8.75□□□□□ -1.01
CBWD1-224ENST00000616803 TLL1O43897 1013 aa8.74□□□□□ -1.01
CBWD1-224ENST00000616803 TMUB1Q9BVT8 246 aa8.74□□□□□ -1.01
CBWD1-224ENST00000616803 IL21Q9HBE4 155 aa8.74□□□□□ -1.01
CBWD1-224ENST00000616803 ACTN4O43707 911 aaKnown RBP8.73□□□□□ -1.01
CBWD1-224ENST00000616803 PCDHB3Q9Y5E6 796 aa8.72□□□□□ -1.01
CBWD1-224ENST00000616803 TULP1O00294 542 aaPredicted RBP8.71□□□□□ -1.02
CBWD1-224ENST00000616803 ZPR1O75312 459 aa8.71□□□□□ -1.02
CBWD1-224ENST00000616803 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
CBWD1-224ENST00000616803 GCGRP47871 477 aa8.7□□□□□ -1.02
CBWD1-224ENST00000616803 FUT2Q10981 343 aa8.7□□□□□ -1.02
CBWD1-224ENST00000616803 RDH13Q8NBN7 331 aa8.7□□□□□ -1.02
CBWD1-224ENST00000616803 HLA-CQ95604 372 aa8.7□□□□□ -1.02
CBWD1-224ENST00000616803 KRI1Q8N9T8 703 aaKnown RBP8.69□□□□□ -1.02
CBWD1-224ENST00000616803 EMID1Q96A84 441 aaPredicted RBP8.69□□□□□ -1.02
CBWD1-224ENST00000616803 PPEF1O14829 653 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-224ENST00000616803 CD46P15529 392 aa8.68□□□□□ -1.02
CBWD1-224ENST00000616803 SCUBE3Q8IX30 993 aa8.68□□□□□ -1.02
CBWD1-224ENST00000616803 MORN1Q5T089 497 aa8.67□□□□□ -1.02
CBWD1-224ENST00000616803 LCE2BO14633 110 aa8.66□□□□□ -1.02
CBWD1-224ENST00000616803 KMT5BQ4FZB7 885 aa8.66□□□□□ -1.02
CBWD1-224ENST00000616803 SLC24A3Q9HC58 644 aa8.66□□□□□ -1.02
CBWD1-224ENST00000616803 FAM217BQ9NTX9 383 aaPredicted RBP8.66□□□□□ -1.02
CBWD1-224ENST00000616803 TRIM66O15016 1216 aa8.65□□□□□ -1.02
CBWD1-224ENST00000616803 SLC27A5Q9Y2P5 690 aa8.65□□□□□ -1.02
CBWD1-224ENST00000616803 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
CBWD1-224ENST00000616803 THAP11Q96EK4 314 aa8.64□□□□□ -1.03
CBWD1-224ENST00000616803 PRKD2Q9BZL6 878 aa8.64□□□□□ -1.03
CBWD1-224ENST00000616803 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.64□□□□□ -1.03
CBWD1-224ENST00000616803 GFRA3O60609 400 aa8.63□□□□□ -1.03
CBWD1-224ENST00000616803 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
CBWD1-224ENST00000616803 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
CBWD1-224ENST00000616803 RNF223E7ERA6 249 aa8.62□□□□□ -1.03
CBWD1-224ENST00000616803 S1PR4O95977 384 aa8.62□□□□□ -1.03
CBWD1-224ENST00000616803 RNF19BQ6ZMZ0 732 aa8.62□□□□□ -1.03
CBWD1-224ENST00000616803 NECTIN2Q92692 538 aa8.62□□□□□ -1.03
CBWD1-224ENST00000616803 GPCPD1Q9NPB8 672 aa8.62□□□□□ -1.03
CBWD1-224ENST00000616803 SSTR3P32745 418 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-224ENST00000616803 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
CBWD1-224ENST00000616803 LAPTM4AQ15012 233 aa8.61□□□□□ -1.03
CBWD1-224ENST00000616803 AMHR2Q16671 573 aa8.61□□□□□ -1.03
CBWD1-224ENST00000616803 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
CBWD1-224ENST00000616803 PRR14Q9BWN1 585 aa8.61□□□□□ -1.03
CBWD1-224ENST00000616803 MS4A1P11836 297 aa8.6□□□□□ -1.03
CBWD1-224ENST00000616803 SULF1Q8IWU6 871 aa8.6□□□□□ -1.03
CBWD1-224ENST00000616803 PARP9Q8IXQ6 854 aa8.6□□□□□ -1.03
CBWD1-224ENST00000616803 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
CBWD1-224ENST00000616803 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
CBWD1-224ENST00000616803 KDM4AO75164 1064 aa8.58□□□□□ -1.04
CBWD1-224ENST00000616803 ADH1BP00325 375 aa8.58□□□□□ -1.04
CBWD1-224ENST00000616803 CLCN1P35523 988 aa8.58□□□□□ -1.04
CBWD1-224ENST00000616803 TRAF7Q6Q0C0 670 aa8.58□□□□□ -1.04
CBWD1-224ENST00000616803 GIGYF2Q6Y7W6 1299 aaKnown RBP8.58□□□□□ -1.04
CBWD1-224ENST00000616803 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
CBWD1-224ENST00000616803 BCANQ96GW7 911 aa8.58□□□□□ -1.04
CBWD1-224ENST00000616803 NR1I2O75469 434 aa8.57□□□□□ -1.04
CBWD1-224ENST00000616803 RSPH4AQ5TD94 716 aa8.57□□□□□ -1.04
CBWD1-224ENST00000616803 AK7Q96M32 723 aa8.57□□□□□ -1.04
CBWD1-224ENST00000616803 SPSB2Q99619 263 aa8.57□□□□□ -1.04
CBWD1-224ENST00000616803 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
CBWD1-224ENST00000616803 NDUFV2P19404 249 aa8.56□□□□□ -1.04
CBWD1-224ENST00000616803 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
CBWD1-224ENST00000616803 NRG2O14511 850 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-224ENST00000616803 HOXA2O43364 376 aa8.55□□□□□ -1.04
CBWD1-224ENST00000616803 PDE4DQ08499 809 aa8.55□□□□□ -1.04
CBWD1-224ENST00000616803 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
CBWD1-224ENST00000616803 TTLL12Q14166 644 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-224ENST00000616803 SLC6A16Q9GZN6 736 aa8.53□□□□□ -1.04
CBWD1-224ENST00000616803 V9GY48 417 aaPredicted RBP8.53□□□□□ -1.04
CBWD1-224ENST00000616803 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
CBWD1-224ENST00000616803 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
CBWD1-224ENST00000616803 TRIM67Q6ZTA4 783 aa8.51□□□□□ -1.05
CBWD1-224ENST00000616803 PDZRN3Q9UPQ7 1066 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms