RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 NUTM2DQ5VT03 806 aaPredicted RBP17.12■□□□□ 0.33
PCDHA11-202ENST00000616325 AFAP1Q8N556 730 aa17.12■□□□□ 0.33
PCDHA11-202ENST00000616325 TRIM44Q96DX7 344 aaPredicted RBP17.12■□□□□ 0.33
PCDHA11-202ENST00000616325 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
PCDHA11-202ENST00000616325 IGHDP01880 384 aa17.11■□□□□ 0.33
PCDHA11-202ENST00000616325 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCDHA11-202ENST00000616325 POLR1AO95602 1720 aaPredicted RBP17.11■□□□□ 0.33
PCDHA11-202ENST00000616325 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
PCDHA11-202ENST00000616325 ADGRL2O95490 1459 aa17.11■□□□□ 0.33
PCDHA11-202ENST00000616325 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
PCDHA11-202ENST00000616325 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
PCDHA11-202ENST00000616325 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
PCDHA11-202ENST00000616325 A2MP01023 1474 aa17.09■□□□□ 0.33
PCDHA11-202ENST00000616325 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.33
PCDHA11-202ENST00000616325 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
PCDHA11-202ENST00000616325 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
PCDHA11-202ENST00000616325 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
PCDHA11-202ENST00000616325 SLFN5Q08AF3 891 aa17.07■□□□□ 0.32
PCDHA11-202ENST00000616325 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
PCDHA11-202ENST00000616325 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
PCDHA11-202ENST00000616325 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
PCDHA11-202ENST00000616325 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
PCDHA11-202ENST00000616325 KIF3BO15066 747 aa17.05■□□□□ 0.32
PCDHA11-202ENST00000616325 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
PCDHA11-202ENST00000616325 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
PCDHA11-202ENST00000616325 CENPJQ9HC77 1338 aaPredicted RBP17.04■□□□□ 0.32
PCDHA11-202ENST00000616325 TRAK2O60296 914 aa17.04■□□□□ 0.32
PCDHA11-202ENST00000616325 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
PCDHA11-202ENST00000616325 CLCN1P35523 988 aa17.03■□□□□ 0.32
PCDHA11-202ENST00000616325 CDCA8Q53HL2 280 aa17.03■□□□□ 0.32
PCDHA11-202ENST00000616325 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
PCDHA11-202ENST00000616325 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
PCDHA11-202ENST00000616325 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
PCDHA11-202ENST00000616325 MCM4P33991 863 aa17.03■□□□□ 0.32
PCDHA11-202ENST00000616325 RBM10P98175 930 aaKnown RBP17.02■□□□□ 0.32
PCDHA11-202ENST00000616325 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
PCDHA11-202ENST00000616325 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
PCDHA11-202ENST00000616325 MAGI2Q86UL8 1455 aa17.02■□□□□ 0.32
PCDHA11-202ENST00000616325 ESPNB1AK53 854 aa17.02■□□□□ 0.31
PCDHA11-202ENST00000616325 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.31
PCDHA11-202ENST00000616325 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
PCDHA11-202ENST00000616325 PODXL2Q9NZ53 605 aa17.01■□□□□ 0.31
PCDHA11-202ENST00000616325 USP19O94966 1318 aa17.01■□□□□ 0.31
PCDHA11-202ENST00000616325 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
PCDHA11-202ENST00000616325 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
PCDHA11-202ENST00000616325 PLEKHG5O94827 1062 aa17■□□□□ 0.31
PCDHA11-202ENST00000616325 RSPH4AQ5TD94 716 aa17■□□□□ 0.31
PCDHA11-202ENST00000616325 TMEM132EQ6IEE7 984 aa17■□□□□ 0.31
PCDHA11-202ENST00000616325 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
PCDHA11-202ENST00000616325 SPAG9O60271 1321 aaKnown RBP16.99■□□□□ 0.31
PCDHA11-202ENST00000616325 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
PCDHA11-202ENST00000616325 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
PCDHA11-202ENST00000616325 CDC42BPAQ5VT25 1732 aa16.99■□□□□ 0.31
PCDHA11-202ENST00000616325 E9PSI1 815 aa16.99■□□□□ 0.31
PCDHA11-202ENST00000616325 EFCAB2Q5VUJ9 269 aa16.98■□□□□ 0.31
PCDHA11-202ENST00000616325 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
PCDHA11-202ENST00000616325 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
PCDHA11-202ENST00000616325 GRPEL1Q9HAV7 217 aa16.97■□□□□ 0.31
PCDHA11-202ENST00000616325 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
PCDHA11-202ENST00000616325 U2AF1L5P0DN76 240 aaPredicted RBP16.96■□□□□ 0.31
PCDHA11-202ENST00000616325 U2AF1Q01081 240 aaKnown RBP eCLIP16.96■□□□□ 0.31
PCDHA11-202ENST00000616325 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.31
PCDHA11-202ENST00000616325 MRE11P49959 708 aa16.96■□□□□ 0.31
PCDHA11-202ENST00000616325 ZMYM4Q5VZL5 1548 aa16.95■□□□□ 0.3
PCDHA11-202ENST00000616325 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
PCDHA11-202ENST00000616325 RLBP1P12271 317 aa16.95■□□□□ 0.3
PCDHA11-202ENST00000616325 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
PCDHA11-202ENST00000616325 ADGRF5Q8IZF2 1346 aa16.95■□□□□ 0.3
PCDHA11-202ENST00000616325 FAM13BQ9NYF5 915 aa16.95■□□□□ 0.3
PCDHA11-202ENST00000616325 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
PCDHA11-202ENST00000616325 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
PCDHA11-202ENST00000616325 ERBB4Q15303 1308 aa16.94■□□□□ 0.3
PCDHA11-202ENST00000616325 ANTXR1Q9H6X2 564 aa16.94■□□□□ 0.3
PCDHA11-202ENST00000616325 GGT6Q6P531 493 aa16.93■□□□□ 0.3
PCDHA11-202ENST00000616325 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
PCDHA11-202ENST00000616325 PCDHB15Q9Y5E8 787 aa16.93■□□□□ 0.3
PCDHA11-202ENST00000616325 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
PCDHA11-202ENST00000616325 STK26Q9P289 416 aa16.92■□□□□ 0.3
PCDHA11-202ENST00000616325 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
PCDHA11-202ENST00000616325 MTHFSP49914 203 aa16.92■□□□□ 0.3
PCDHA11-202ENST00000616325 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
PCDHA11-202ENST00000616325 SAMD9LQ8IVG5 1584 aa16.91■□□□□ 0.3
PCDHA11-202ENST00000616325 CHMP5Q9NZZ3 219 aa16.91■□□□□ 0.3
PCDHA11-202ENST00000616325 PDZRN3Q9UPQ7 1066 aa16.91■□□□□ 0.3
PCDHA11-202ENST00000616325 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
PCDHA11-202ENST00000616325 ZNF521Q96K83 1311 aa16.91■□□□□ 0.3
PCDHA11-202ENST00000616325 CGNL1Q0VF96 1302 aa16.9■□□□□ 0.3
PCDHA11-202ENST00000616325 NKTRP30414 1462 aaKnown RBP16.9■□□□□ 0.3
PCDHA11-202ENST00000616325 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
PCDHA11-202ENST00000616325 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
PCDHA11-202ENST00000616325 ITPRIPQ8IWB1 547 aa16.89■□□□□ 0.29
PCDHA11-202ENST00000616325 FSD2A1L4K1 749 aa16.89■□□□□ 0.29
PCDHA11-202ENST00000616325 HSCBQ8IWL3 235 aa16.89■□□□□ 0.29
PCDHA11-202ENST00000616325 ANP32BQ92688 251 aaKnown RBP16.89■□□□□ 0.29
PCDHA11-202ENST00000616325 TBC1D32Q96NH3 1257 aa16.88■□□□□ 0.29
PCDHA11-202ENST00000616325 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
PCDHA11-202ENST00000616325 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
PCDHA11-202ENST00000616325 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
PCDHA11-202ENST00000616325 ABCA8O94911 1581 aa16.86■□□□□ 0.29
PCDHA11-202ENST00000616325 RARSP54136 660 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms