RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
LMO3-235ENST00000616247 C22orf23Q9BZE7 217 aa8.44□□□□□ -1.06
LMO3-235ENST00000616247 FAM13BQ9NYF5 915 aa8.44□□□□□ -1.06
LMO3-235ENST00000616247 IFT140Q96RY7 1462 aa8.44□□□□□ -1.06
LMO3-235ENST00000616247 ANKRD50Q9ULJ7 1429 aa8.44□□□□□ -1.06
LMO3-235ENST00000616247 ABCA5Q8WWZ7 1642 aa8.44□□□□□ -1.06
LMO3-235ENST00000616247 ROCK1Q13464 1354 aa8.44□□□□□ -1.06
LMO3-235ENST00000616247 DISP3Q9P2K9 1392 aa8.44□□□□□ -1.06
LMO3-235ENST00000616247 E9PSI1 815 aa8.44□□□□□ -1.06
LMO3-235ENST00000616247 PMFBP1Q8TBY8 1022 aa8.43□□□□□ -1.06
LMO3-235ENST00000616247 A0A0U1RQG5 324 aaPredicted RBP8.43□□□□□ -1.06
LMO3-235ENST00000616247 RWDD1Q9H446 243 aaPredicted RBP8.43□□□□□ -1.06
LMO3-235ENST00000616247 PZPP20742 1482 aa8.43□□□□□ -1.06
LMO3-235ENST00000616247 TCOF1Q13428 1488 aaKnown RBP8.43□□□□□ -1.06
LMO3-235ENST00000616247 PLEKHD1A6NEE1 506 aa8.42□□□□□ -1.06
LMO3-235ENST00000616247 MSNP26038 577 aaKnown RBP8.42□□□□□ -1.06
LMO3-235ENST00000616247 KIAA1211Q6ZU35 1233 aa8.42□□□□□ -1.06
LMO3-235ENST00000616247 TBC1D32Q96NH3 1257 aa8.42□□□□□ -1.06
LMO3-235ENST00000616247 PCDHB15Q9Y5E8 787 aa8.42□□□□□ -1.06
LMO3-235ENST00000616247 ANTXR1Q9H6X2 564 aa8.42□□□□□ -1.06
LMO3-235ENST00000616247 PRG4Q92954 1404 aaPredicted RBP8.42□□□□□ -1.06
LMO3-235ENST00000616247 EIF4G3O43432 1585 aaKnown RBP8.41□□□□□ -1.06
LMO3-235ENST00000616247 DDX11L8A8MPP1 907 aa8.41□□□□□ -1.06
LMO3-235ENST00000616247 TPRNQ4KMQ1 711 aa8.41□□□□□ -1.06
LMO3-235ENST00000616247 R3HCC1Q9Y3T6 440 aaKnown RBP8.41□□□□□ -1.06
LMO3-235ENST00000616247 ERBB4Q15303 1308 aa8.4□□□□□ -1.06
LMO3-235ENST00000616247 GBP4Q96PP9 640 aa8.4□□□□□ -1.06
LMO3-235ENST00000616247 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
LMO3-235ENST00000616247 CCDC144AA2RUR9 1427 aa8.4□□□□□ -1.06
LMO3-235ENST00000616247 RALGAPBQ86X10 1494 aa8.4□□□□□ -1.06
LMO3-235ENST00000616247 PDE3AQ14432 1141 aa8.4□□□□□ -1.07
LMO3-235ENST00000616247 ITPRIPQ8IWB1 547 aa8.4□□□□□ -1.07
LMO3-235ENST00000616247 TESK2Q96S53 571 aa8.4□□□□□ -1.07
LMO3-235ENST00000616247 RLBP1P12271 317 aa8.39□□□□□ -1.07
LMO3-235ENST00000616247 GCC2Q8IWJ2 1684 aa8.39□□□□□ -1.07
LMO3-235ENST00000616247 GOLGA6L22H0YM25 854 aa8.39□□□□□ -1.07
LMO3-235ENST00000616247 DDX49Q9Y6V7 483 aaKnown RBP8.39□□□□□ -1.07
LMO3-235ENST00000616247 PBRM1Q86U86 1689 aa8.39□□□□□ -1.07
LMO3-235ENST00000616247 FSD2A1L4K1 749 aa8.39□□□□□ -1.07
LMO3-235ENST00000616247 KDM5CP41229 1560 aa8.38□□□□□ -1.07
LMO3-235ENST00000616247 GAS2L3Q86XJ1 694 aa8.38□□□□□ -1.07
LMO3-235ENST00000616247 ERBINQ96RT1 1412 aa8.38□□□□□ -1.07
LMO3-235ENST00000616247 NASPP49321 788 aaPredicted RBP8.38□□□□□ -1.07
LMO3-235ENST00000616247 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
LMO3-235ENST00000616247 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
LMO3-235ENST00000616247 LNPKQ9C0E8 428 aa8.38□□□□□ -1.07
LMO3-235ENST00000616247 TNPO1Q92973 898 aaKnown RBP8.37□□□□□ -1.07
LMO3-235ENST00000616247 EIF3AQ14152 1382 aaKnown RBP8.37□□□□□ -1.07
LMO3-235ENST00000616247 WWC1Q8IX03 1113 aa8.37□□□□□ -1.07
LMO3-235ENST00000616247 BLMP54132 1417 aaPredicted RBP8.37□□□□□ -1.07
LMO3-235ENST00000616247 TPM2P07951 284 aa8.37□□□□□ -1.07
LMO3-235ENST00000616247 DNTTIP2Q5QJE6 756 aaKnown RBP8.37□□□□□ -1.07
LMO3-235ENST00000616247 FOXD4L5Q5VV16 416 aaPredicted RBP8.37□□□□□ -1.07
LMO3-235ENST00000616247 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
LMO3-235ENST00000616247 SMC4Q9NTJ3 1288 aa8.37□□□□□ -1.07
LMO3-235ENST00000616247 NKTRP30414 1462 aaKnown RBP8.36□□□□□ -1.07
LMO3-235ENST00000616247 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
LMO3-235ENST00000616247 MORC1Q86VD1 984 aa8.36□□□□□ -1.07
LMO3-235ENST00000616247 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
LMO3-235ENST00000616247 PLEKHG5O94827 1062 aa8.36□□□□□ -1.07
LMO3-235ENST00000616247 RARSP54136 660 aaKnown RBP8.36□□□□□ -1.07
LMO3-235ENST00000616247 AMER1Q5JTC6 1135 aaPredicted RBP8.36□□□□□ -1.07
LMO3-235ENST00000616247 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
LMO3-235ENST00000616247 MPNDQ8N594 471 aa8.36□□□□□ -1.07
LMO3-235ENST00000616247 ZMYM4Q5VZL5 1548 aa8.36□□□□□ -1.07
LMO3-235ENST00000616247 PTMAP06454 111 aaKnown RBP8.35□□□□□ -1.07
LMO3-235ENST00000616247 PDCL3Q9H2J4 239 aa8.35□□□□□ -1.07
LMO3-235ENST00000616247 U2AF1L5P0DN76 240 aaPredicted RBP8.35□□□□□ -1.07
LMO3-235ENST00000616247 U2AF1Q01081 240 aaKnown RBP eCLIP8.35□□□□□ -1.07
LMO3-235ENST00000616247 KIAA0586Q9BVV6 1533 aa8.35□□□□□ -1.07
LMO3-235ENST00000616247 MBD5Q9P267 1494 aa8.35□□□□□ -1.07
LMO3-235ENST00000616247 CTTNBP2Q8WZ74 1663 aa8.35□□□□□ -1.07
LMO3-235ENST00000616247 ADAMTS12P58397 1594 aa8.35□□□□□ -1.07
LMO3-235ENST00000616247 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
LMO3-235ENST00000616247 XPCQ01831 940 aaPredicted RBP8.35□□□□□ -1.07
LMO3-235ENST00000616247 TSR2Q969E8 191 aaKnown RBP8.35□□□□□ -1.07
LMO3-235ENST00000616247 U3KPZ7 1027 aaPredicted RBP8.35□□□□□ -1.07
LMO3-235ENST00000616247 CAMSAP2Q08AD1 1489 aa8.35□□□□□ -1.07
LMO3-235ENST00000616247 ZNF521Q96K83 1311 aa8.34□□□□□ -1.07
LMO3-235ENST00000616247 PLEKHH2Q8IVE3 1493 aa8.34□□□□□ -1.07
LMO3-235ENST00000616247 DZIP1LQ8IYY4 767 aaKnown RBP8.34□□□□□ -1.07
LMO3-235ENST00000616247 UHRF1BP1Q6BDS2 1440 aa8.34□□□□□ -1.07
LMO3-235ENST00000616247 ARHGEF11O15085 1522 aa8.34□□□□□ -1.07
LMO3-235ENST00000616247 KIF14Q15058 1648 aa8.34□□□□□ -1.07
LMO3-235ENST00000616247 ZKSCAN2Q63HK3 967 aa8.34□□□□□ -1.07
LMO3-235ENST00000616247 CAVIN1Q6NZI2 390 aaKnown RBP8.34□□□□□ -1.07
LMO3-235ENST00000616247 LRRIQ1Q96JM4 1722 aa8.34□□□□□ -1.07
LMO3-235ENST00000616247 CUL7Q14999 1698 aa8.34□□□□□ -1.07
LMO3-235ENST00000616247 SSFA2P28290 1259 aa8.33□□□□□ -1.08
LMO3-235ENST00000616247 CALD1Q05682 793 aaKnown RBP8.33□□□□□ -1.08
LMO3-235ENST00000616247 MCTP1Q6DN14 999 aa8.33□□□□□ -1.08
LMO3-235ENST00000616247 ZSCAN30Q86W11 494 aa8.33□□□□□ -1.08
LMO3-235ENST00000616247 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
LMO3-235ENST00000616247 C9orf84Q5VXU9 1444 aa8.33□□□□□ -1.08
LMO3-235ENST00000616247 KCNA4P22459 653 aa8.32□□□□□ -1.08
LMO3-235ENST00000616247 SKOR2Q2VWA4 1001 aaPredicted RBP8.32□□□□□ -1.08
LMO3-235ENST00000616247 FOXD4L6Q3SYB3 417 aaPredicted RBP8.32□□□□□ -1.08
LMO3-235ENST00000616247 ANKRD45Q5TZF3 282 aa8.32□□□□□ -1.08
LMO3-235ENST00000616247 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
LMO3-235ENST00000616247 RNF214Q8ND24 703 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms