RNA–Protein interactions for RNA: ENST00000616176.4

PARP6-223, Transcript of poly(ADP-ribose) polymerase family member 6, human

TSL 5 BASIC

Gene PARP6, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PARP6-223	ENST00000616176	GAS2L3	Q86XJ1	694 aa		13.7	□□□□□ -0.22
PARP6-223	ENST00000616176	RAI14	Q9P0K7	980 aa		13.7	□□□□□ -0.22
PARP6-223	ENST00000616176	UPF2	Q9HAU5	1272 aa	Known RBP	13.69	□□□□□ -0.22
PARP6-223	ENST00000616176	NCOA1	Q15788	1441 aa		13.69	□□□□□ -0.22
PARP6-223	ENST00000616176	RAD50	Q92878	1312 aa		13.69	□□□□□ -0.22
PARP6-223	ENST00000616176	LOC102724159	A0A0B4J2E5	919 aa		13.69	□□□□□ -0.22
PARP6-223	ENST00000616176	CCDC172	P0C7W6	258 aa		13.69	□□□□□ -0.22
PARP6-223	ENST00000616176	PWP2	Q15269	919 aa	Known RBP	13.69	□□□□□ -0.22
PARP6-223	ENST00000616176	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.69	□□□□□ -0.22
PARP6-223	ENST00000616176	SLFN14	P0C7P3	912 aa		13.68	□□□□□ -0.22
PARP6-223	ENST00000616176	TNNT3	P45378	269 aa	Predicted RBP	13.68	□□□□□ -0.22
PARP6-223	ENST00000616176	ZNF592	Q92610	1267 aa		13.67	□□□□□ -0.22
PARP6-223	ENST00000616176	ZMYM3	Q14202	1370 aa		13.67	□□□□□ -0.22
PARP6-223	ENST00000616176	CCDC39	Q9UFE4	941 aa		13.67	□□□□□ -0.22
PARP6-223	ENST00000616176	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.67	□□□□□ -0.22
PARP6-223	ENST00000616176	NLRP1	Q9C000	1473 aa		13.66	□□□□□ -0.22
PARP6-223	ENST00000616176	KIF1C	O43896	1103 aa	Known RBP	13.66	□□□□□ -0.22
PARP6-223	ENST00000616176	CCDC7	Q96M83	1385 aa		13.65	□□□□□ -0.22
PARP6-223	ENST00000616176	GTF2A1	P52655	376 aa	Predicted RBP	13.65	□□□□□ -0.22
PARP6-223	ENST00000616176	NBPF11	Q86T75	865 aa		13.65	□□□□□ -0.22
PARP6-223	ENST00000616176	SIRT1	Q96EB6	747 aa		13.65	□□□□□ -0.22
PARP6-223	ENST00000616176	PANK3	Q9H999	370 aa		13.65	□□□□□ -0.22
PARP6-223	ENST00000616176	KIAA1107	Q9UPP5	1409 aa		13.65	□□□□□ -0.22
PARP6-223	ENST00000616176	GBP4	Q96PP9	640 aa		13.64	□□□□□ -0.23
PARP6-223	ENST00000616176	MAP2K1	Q02750	393 aa	Predicted RBP	13.64	□□□□□ -0.23
PARP6-223	ENST00000616176	ANKRD7	Q92527	254 aa		13.64	□□□□□ -0.23
PARP6-223	ENST00000616176	TBC1D2	Q9BYX2	928 aa		13.64	□□□□□ -0.23
PARP6-223	ENST00000616176	RBM28	Q9NW13	759 aa	Known RBP	13.64	□□□□□ -0.23
PARP6-223	ENST00000616176	NOP2	P46087	812 aa	Known RBP	13.63	□□□□□ -0.23
PARP6-223	ENST00000616176	TERF2	Q15554	542 aa		13.63	□□□□□ -0.23
PARP6-223	ENST00000616176	CHMP4C	Q96CF2	233 aa		13.63	□□□□□ -0.23
PARP6-223	ENST00000616176	PRR29	P0C7W0	189 aa		13.63	□□□□□ -0.23
PARP6-223	ENST00000616176	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PARP6-223	ENST00000616176	TPRN	Q4KMQ1	711 aa		13.63	□□□□□ -0.23
PARP6-223	ENST00000616176	SLC26A8	Q96RN1	970 aa		13.63	□□□□□ -0.23
PARP6-223	ENST00000616176	TTC36	A6NLP5	189 aa		13.62	□□□□□ -0.23
PARP6-223	ENST00000616176	KIAA2012	Q0VF49	1180 aa		13.62	□□□□□ -0.23
PARP6-223	ENST00000616176	ICE2	Q659A1	982 aa		13.62	□□□□□ -0.23
PARP6-223	ENST00000616176	MNS1	Q8NEH6	495 aa		13.62	□□□□□ -0.23
PARP6-223	ENST00000616176	PSMD1	Q99460	953 aa		13.62	□□□□□ -0.23
PARP6-223	ENST00000616176	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.62	□□□□□ -0.23
PARP6-223	ENST00000616176	KIF16B	Q96L93	1317 aa		13.62	□□□□□ -0.23
PARP6-223	ENST00000616176	SYNJ1	O43426	1573 aa		13.62	□□□□□ -0.23
PARP6-223	ENST00000616176	LRPPRC	P42704	1394 aa	Known RBP	13.61	□□□□□ -0.23
PARP6-223	ENST00000616176	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.61	□□□□□ -0.23
PARP6-223	ENST00000616176	HSPA5	P11021	654 aa	Known RBP	13.61	□□□□□ -0.23
PARP6-223	ENST00000616176	SYCP1	Q15431	976 aa		13.61	□□□□□ -0.23
PARP6-223	ENST00000616176	NBPF9	Q3BBW0	867 aa		13.61	□□□□□ -0.23
PARP6-223	ENST00000616176	DONSON	Q9NYP3	566 aa		13.61	□□□□□ -0.23
PARP6-223	ENST00000616176	SPDYE4	A6NLX3	237 aa		13.6	□□□□□ -0.23
PARP6-223	ENST00000616176	BSDC1	Q9NW68	430 aa	Predicted RBP	13.6	□□□□□ -0.23
PARP6-223	ENST00000616176	SH3BP1	Q9Y3L3	701 aa		13.6	□□□□□ -0.23
PARP6-223	ENST00000616176	ROCK2	O75116	1388 aa	Known RBP	13.6	□□□□□ -0.23
PARP6-223	ENST00000616176	MAPK8IP3	Q9UPT6	1336 aa		13.6	□□□□□ -0.23
PARP6-223	ENST00000616176	NPM1	P06748	294 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PARP6-223	ENST00000616176	GUCY2C	P25092	1073 aa		13.6	□□□□□ -0.23
PARP6-223	ENST00000616176	ZNF445	P59923	1031 aa		13.6	□□□□□ -0.23
PARP6-223	ENST00000616176	KDM5B	Q9UGL1	1544 aa		13.59	□□□□□ -0.23
PARP6-223	ENST00000616176	GOLIM4	O00461	696 aa		13.59	□□□□□ -0.23
PARP6-223	ENST00000616176	PNISR	Q8TF01	805 aa	Known RBP	13.59	□□□□□ -0.23
PARP6-223	ENST00000616176	TBC1D32	Q96NH3	1257 aa		13.59	□□□□□ -0.23
PARP6-223	ENST00000616176	BCL2L12	Q9HB09	334 aa		13.59	□□□□□ -0.23
PARP6-223	ENST00000616176	SSR1	P43307	286 aa	Known RBP	13.58	□□□□□ -0.23
PARP6-223	ENST00000616176	CRBN	Q96SW2	442 aa		13.58	□□□□□ -0.23
PARP6-223	ENST00000616176	RASSF4	Q9H2L5	321 aa		13.58	□□□□□ -0.23
PARP6-223	ENST00000616176	DHX16	O60231	1041 aa	Known RBP	13.58	□□□□□ -0.24
PARP6-223	ENST00000616176	PUS7	Q96PZ0	661 aa	Known RBP	13.58	□□□□□ -0.24
PARP6-223	ENST00000616176	RUSC2	Q8N2Y8	1516 aa		13.57	□□□□□ -0.24
PARP6-223	ENST00000616176	IGSF3	O75054	1194 aa		13.57	□□□□□ -0.24
PARP6-223	ENST00000616176	CALR	P27797	417 aa	Known RBP	13.57	□□□□□ -0.24
PARP6-223	ENST00000616176	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.57	□□□□□ -0.24
PARP6-223	ENST00000616176	ARHGAP31	Q2M1Z3	1444 aa		13.57	□□□□□ -0.24
PARP6-223	ENST00000616176	U2AF2	P26368	475 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	2e-7	■■■■□ 24.6
PARP6-223	ENST00000616176	DIAPH3	Q9NSV4	1193 aa		13.57	□□□□□ -0.24
PARP6-223	ENST00000616176	NCOA3	Q9Y6Q9	1424 aa		13.56	□□□□□ -0.24
PARP6-223	ENST00000616176	MED4	Q9NPJ6	270 aa		13.56	□□□□□ -0.24
PARP6-223	ENST00000616176	RSPH14	Q9UHP6	348 aa		13.56	□□□□□ -0.24
PARP6-223	ENST00000616176	CTTNBP2	Q8WZ74	1663 aa		13.56	□□□□□ -0.24
PARP6-223	ENST00000616176	KLHL40	Q2TBA0	621 aa		13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	DDX41	Q9UJV9	622 aa	Known RBP	13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	NPC1L1	Q9UHC9	1359 aa		13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	IRF6	O14896	467 aa		13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	OS9	Q13438	667 aa	Predicted RBP	13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	KANK4	Q5T7N3	995 aa	Predicted RBP	13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	NBPF10	Q6P3W6	841 aa	Known RBP	13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	SKAP1	Q86WV1	359 aa		13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	ZBTB9	Q96C00	473 aa		13.55	□□□□□ -0.24
PARP6-223	ENST00000616176	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.54	□□□□□ -0.24
PARP6-223	ENST00000616176	GOLGA6L22	H0YM25	854 aa		13.54	□□□□□ -0.24
PARP6-223	ENST00000616176	CTIF	O43310	598 aa	Known RBP	13.54	□□□□□ -0.24
PARP6-223	ENST00000616176	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.54	□□□□□ -0.24
PARP6-223	ENST00000616176	INSR	P06213	1382 aa		13.54	□□□□□ -0.24
PARP6-223	ENST00000616176	GOLGA6L6	A8MZA4	724 aa		13.54	□□□□□ -0.24
PARP6-223	ENST00000616176	SEMA3F	Q13275	785 aa		13.54	□□□□□ -0.24
PARP6-223	ENST00000616176	DDIT3	P35638	169 aa		13.53	□□□□□ -0.24
PARP6-223	ENST00000616176	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.53	□□□□□ -0.24
PARP6-223	ENST00000616176	ZMYM4	Q5VZL5	1548 aa		13.53	□□□□□ -0.24
PARP6-223	ENST00000616176	CLEC17A	Q6ZS10	378 aa		13.52	□□□□□ -0.24
PARP6-223	ENST00000616176	KRT222	Q8N1A0	295 aa		13.52	□□□□□ -0.24
PARP6-223	ENST00000616176	PIBF1	Q8WXW3	757 aa		13.52	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms