RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
PCDH15-229ENST00000616114 DZIP1LQ8IYY4 767 aaKnown RBP11.1□□□□□ -0.63
PCDH15-229ENST00000616114 COG3Q96JB2 828 aa11.1□□□□□ -0.63
PCDH15-229ENST00000616114 DDX11L8A8MPP1 907 aa11.1□□□□□ -0.63
PCDH15-229ENST00000616114 KIAA1211Q6ZU35 1233 aa11.1□□□□□ -0.63
PCDH15-229ENST00000616114 SOX12O15370 315 aa11.09□□□□□ -0.63
PCDH15-229ENST00000616114 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
PCDH15-229ENST00000616114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.09□□□□□ -0.63
PCDH15-229ENST00000616114 TCOF1Q13428 1488 aaKnown RBP11.09□□□□□ -0.63
PCDH15-229ENST00000616114 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
PCDH15-229ENST00000616114 DNTTIP2Q5QJE6 756 aaKnown RBP11.08□□□□□ -0.64
PCDH15-229ENST00000616114 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.08□□□□□ -0.64
PCDH15-229ENST00000616114 MSNP26038 577 aaKnown RBP11.08□□□□□ -0.64
PCDH15-229ENST00000616114 PLEKHG5O94827 1062 aa11.08□□□□□ -0.64
PCDH15-229ENST00000616114 GSE1Q14687 1217 aa11.08□□□□□ -0.64
PCDH15-229ENST00000616114 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
PCDH15-229ENST00000616114 AFAP1Q8N556 730 aa11.08□□□□□ -0.64
PCDH15-229ENST00000616114 SYAP1Q96A49 352 aaPredicted RBP11.08□□□□□ -0.64
PCDH15-229ENST00000616114 API5Q9BZZ5 524 aaKnown RBP11.07□□□□□ -0.64
PCDH15-229ENST00000616114 ARHGEF11O15085 1522 aa11.07□□□□□ -0.64
PCDH15-229ENST00000616114 GOLGA6L6A8MZA4 724 aa11.07□□□□□ -0.64
PCDH15-229ENST00000616114 CCDC184Q52MB2 194 aa11.07□□□□□ -0.64
PCDH15-229ENST00000616114 RPGRIP1LQ68CZ1 1315 aa11.07□□□□□ -0.64
PCDH15-229ENST00000616114 MINK1Q8N4C8 1332 aaPredicted RBP11.07□□□□□ -0.64
PCDH15-229ENST00000616114 FGD1P98174 961 aa11.06□□□□□ -0.64
PCDH15-229ENST00000616114 PLB1Q6P1J6 1458 aa11.06□□□□□ -0.64
PCDH15-229ENST00000616114 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
PCDH15-229ENST00000616114 ST18O60284 1047 aa11.06□□□□□ -0.64
PCDH15-229ENST00000616114 RIPK4P57078 832 aa11.06□□□□□ -0.64
PCDH15-229ENST00000616114 SKOR2Q2VWA4 1001 aaPredicted RBP11.06□□□□□ -0.64
PCDH15-229ENST00000616114 CFAP70Q5T0N1 1121 aa11.06□□□□□ -0.64
PCDH15-229ENST00000616114 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
PCDH15-229ENST00000616114 BCL2L13Q9BXK5 485 aa11.06□□□□□ -0.64
PCDH15-229ENST00000616114 APBB1O00213 710 aa11.05□□□□□ -0.64
PCDH15-229ENST00000616114 NGDNQ8NEJ9 315 aaKnown RBP11.05□□□□□ -0.64
PCDH15-229ENST00000616114 GPATCH3Q96I76 525 aa11.05□□□□□ -0.64
PCDH15-229ENST00000616114 GNAI1P63096 354 aa11.05□□□□□ -0.64
PCDH15-229ENST00000616114 CT47B1P0C2W7 299 aaPredicted RBP11.05□□□□□ -0.64
PCDH15-229ENST00000616114 AMPHP49418 695 aa11.05□□□□□ -0.64
PCDH15-229ENST00000616114 PTPRKQ15262 1439 aa11.05□□□□□ -0.64
PCDH15-229ENST00000616114 ITSN2Q9NZM3 1697 aa11.04□□□□□ -0.64
PCDH15-229ENST00000616114 RAPGEF6Q8TEU7 1601 aa11.04□□□□□ -0.64
PCDH15-229ENST00000616114 C11orf95C9JLR9 678 aaPredicted RBP11.04□□□□□ -0.64
PCDH15-229ENST00000616114 ANKRD45Q5TZF3 282 aa11.04□□□□□ -0.64
PCDH15-229ENST00000616114 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
PCDH15-229ENST00000616114 WDR63Q8IWG1 891 aa11.03□□□□□ -0.64
PCDH15-229ENST00000616114 NRDCO43847 1150 aa11.03□□□□□ -0.64
PCDH15-229ENST00000616114 TCP11L2Q8N4U5 519 aa11.03□□□□□ -0.64
PCDH15-229ENST00000616114 GZF1Q9H116 711 aaPredicted RBP11.03□□□□□ -0.64
PCDH15-229ENST00000616114 CSPP1Q1MSJ5 1256 aa11.02□□□□□ -0.64
PCDH15-229ENST00000616114 GPATCH8Q9UKJ3 1502 aaKnown RBP11.02□□□□□ -0.64
PCDH15-229ENST00000616114 MTHFSP49914 203 aa11.02□□□□□ -0.65
PCDH15-229ENST00000616114 HTATSF1O43719 755 aaKnown RBP11.02□□□□□ -0.65
PCDH15-229ENST00000616114 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.65
PCDH15-229ENST00000616114 CHMP5Q9NZZ3 219 aa11.02□□□□□ -0.65
PCDH15-229ENST00000616114 BACH2Q9BYV9 841 aa11.01□□□□□ -0.65
PCDH15-229ENST00000616114 SLC4A10Q6U841 1118 aa11.01□□□□□ -0.65
PCDH15-229ENST00000616114 CHAF1AQ13111 956 aaPredicted RBP11.01□□□□□ -0.65
PCDH15-229ENST00000616114 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
PCDH15-229ENST00000616114 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
PCDH15-229ENST00000616114 PLCB2Q00722 1185 aa11□□□□□ -0.65
PCDH15-229ENST00000616114 PANK1Q8TE04 598 aa11□□□□□ -0.65
PCDH15-229ENST00000616114 RALGAPBQ86X10 1494 aa11□□□□□ -0.65
PCDH15-229ENST00000616114 SLC52A1Q9NWF4 448 aa11□□□□□ -0.65
PCDH15-229ENST00000616114 REC8O95072 547 aa10.99□□□□□ -0.65
PCDH15-229ENST00000616114 CABP2Q9NPB3 220 aa10.99□□□□□ -0.65
PCDH15-229ENST00000616114 PHF14O94880 888 aa10.99□□□□□ -0.65
PCDH15-229ENST00000616114 TPRNQ4KMQ1 711 aa10.99□□□□□ -0.65
PCDH15-229ENST00000616114 TMEM132EQ6IEE7 984 aa10.98□□□□□ -0.65
PCDH15-229ENST00000616114 A0A0G2JS52 829 aa10.98□□□□□ -0.65
PCDH15-229ENST00000616114 WDR62O43379 1518 aa10.98□□□□□ -0.65
PCDH15-229ENST00000616114 ADAMTS12P58397 1594 aa10.98□□□□□ -0.65
PCDH15-229ENST00000616114 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
PCDH15-229ENST00000616114 ZNF608Q9ULD9 1512 aaPredicted RBP10.97□□□□□ -0.65
PCDH15-229ENST00000616114 SLFN5Q08AF3 891 aa10.97□□□□□ -0.65
PCDH15-229ENST00000616114 KIAA2012Q0VF49 1180 aa10.97□□□□□ -0.65
PCDH15-229ENST00000616114 NUP153P49790 1475 aaKnown RBP10.97□□□□□ -0.65
PCDH15-229ENST00000616114 ELL2O00472 640 aaPredicted RBP10.97□□□□□ -0.65
PCDH15-229ENST00000616114 C22orf23Q9BZE7 217 aa10.97□□□□□ -0.65
PCDH15-229ENST00000616114 NFKBIBQ15653 356 aa10.96□□□□□ -0.65
PCDH15-229ENST00000616114 NUP160Q12769 1436 aa10.96□□□□□ -0.66
PCDH15-229ENST00000616114 ATAD2Q6PL18 1390 aa10.96□□□□□ -0.66
PCDH15-229ENST00000616114 KIAA0556O60303 1618 aa10.95□□□□□ -0.66
PCDH15-229ENST00000616114 SCAF11Q99590 1463 aaKnown RBP10.95□□□□□ -0.66
PCDH15-229ENST00000616114 NAP1L2Q9ULW6 460 aaPredicted RBP10.95□□□□□ -0.66
PCDH15-229ENST00000616114 INTS3Q68E01 1043 aaKnown RBP10.95□□□□□ -0.66
PCDH15-229ENST00000616114 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
PCDH15-229ENST00000616114 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
PCDH15-229ENST00000616114 SHANK2Q9UPX8 1470 aa10.95□□□□□ -0.66
PCDH15-229ENST00000616114 FAM135AQ9P2D6 1515 aa10.95□□□□□ -0.66
PCDH15-229ENST00000616114 ATP6V1DQ9Y5K8 247 aa10.94□□□□□ -0.66
PCDH15-229ENST00000616114 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
PCDH15-229ENST00000616114 GCC1Q96CN9 775 aa10.94□□□□□ -0.66
PCDH15-229ENST00000616114 RSPH6AQ9H0K4 717 aa10.94□□□□□ -0.66
PCDH15-229ENST00000616114 CSB-PGBD3P0DP91 1061 aa10.94□□□□□ -0.66
PCDH15-229ENST00000616114 PDZRN3Q9UPQ7 1066 aa10.94□□□□□ -0.66
PCDH15-229ENST00000616114 ARHGEF12Q9NZN5 1544 aa10.93□□□□□ -0.66
PCDH15-229ENST00000616114 CDC45O75419 566 aa10.93□□□□□ -0.66
PCDH15-229ENST00000616114 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
PCDH15-229ENST00000616114 NUCB2P80303 420 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms