RNA–Protein interactions for RNA: ENST00000615680.4

DCLK1-208, Transcript of doublecortin like kinase 1, humanhuman

TSL 2 BASIC

Gene DCLK1, Length 7,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-208ENST00000615680 ERICH2A1L162 156 aa8.56□□□□□ -1.04
DCLK1-208ENST00000615680 ABTB2Q8N961 1025 aa8.56□□□□□ -1.04
DCLK1-208ENST00000615680 R3HCC1Q9Y3T6 440 aaKnown RBP8.56□□□□□ -1.04
DCLK1-208ENST00000615680 ARHGAP5Q13017 1502 aa8.56□□□□□ -1.04
DCLK1-208ENST00000615680 TRIM29Q14134 588 aa8.56□□□□□ -1.04
DCLK1-208ENST00000615680 RUFY2Q8WXA3 655 aa8.56□□□□□ -1.04
DCLK1-208ENST00000615680 L3MBTL2Q969R5 705 aa8.56□□□□□ -1.04
DCLK1-208ENST00000615680 SAMD1Q6SPF0 538 aaPredicted RBP8.56□□□□□ -1.04
DCLK1-208ENST00000615680 CCDC47Q96A33 483 aaKnown RBP8.56□□□□□ -1.04
DCLK1-208ENST00000615680 PDE4CQ08493 712 aa8.55□□□□□ -1.04
DCLK1-208ENST00000615680 TPD52L1Q16890 204 aaPredicted RBP8.55□□□□□ -1.04
DCLK1-208ENST00000615680 FAM184AQ8NB25 1140 aa8.55□□□□□ -1.04
DCLK1-208ENST00000615680 H3BQV1 296 aa8.55□□□□□ -1.04
DCLK1-208ENST00000615680 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
DCLK1-208ENST00000615680 DMRT2Q9Y5R5 561 aa8.55□□□□□ -1.04
DCLK1-208ENST00000615680 G3BP1Q13283 466 aaKnown RBP eCLIP8.55□□□□□ -1.04
DCLK1-208ENST00000615680 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
DCLK1-208ENST00000615680 KIF15Q9NS87 1388 aa8.55□□□□□ -1.04
DCLK1-208ENST00000615680 WWC2Q6AWC2 1192 aa8.55□□□□□ -1.04
DCLK1-208ENST00000615680 SYNJ2O15056 1496 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 GRIN2BQ13224 1484 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 IFIT2P09913 472 aaKnown RBP8.54□□□□□ -1.04
DCLK1-208ENST00000615680 DIAPH3Q9NSV4 1193 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 A0A0U1RQG5 324 aaPredicted RBP8.54□□□□□ -1.04
DCLK1-208ENST00000615680 ERICH6BQ5W0A0 696 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 MYOM3Q5VTT5 1437 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 ROCK1Q13464 1354 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 WDHD1O75717 1129 aaPredicted RBP8.54□□□□□ -1.04
DCLK1-208ENST00000615680 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
DCLK1-208ENST00000615680 FGD5Q6ZNL6 1462 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 TCERG1O14776 1098 aaKnown RBP8.54□□□□□ -1.04
DCLK1-208ENST00000615680 ST18O60284 1047 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 RILPL2Q969X0 211 aa8.54□□□□□ -1.04
DCLK1-208ENST00000615680 TATP17735 454 aaPredicted RBP8.53□□□□□ -1.04
DCLK1-208ENST00000615680 CLUAP1Q96AJ1 413 aa8.53□□□□□ -1.04
DCLK1-208ENST00000615680 PES1O00541 588 aaKnown RBP8.53□□□□□ -1.04
DCLK1-208ENST00000615680 TOM1L2Q6ZVM7 507 aa8.53□□□□□ -1.04
DCLK1-208ENST00000615680 RBM42Q9BTD8 480 aaKnown RBP8.53□□□□□ -1.04
DCLK1-208ENST00000615680 PANK3Q9H999 370 aa8.53□□□□□ -1.04
DCLK1-208ENST00000615680 ELL2O00472 640 aaPredicted RBP8.53□□□□□ -1.04
DCLK1-208ENST00000615680 SPRYD3Q8NCJ5 442 aa8.53□□□□□ -1.04
DCLK1-208ENST00000615680 TPM3P06753 285 aa8.53□□□□□ -1.04
DCLK1-208ENST00000615680 NUTM2GQ5VZR2 741 aa8.53□□□□□ -1.04
DCLK1-208ENST00000615680 IKQ13123 557 aaPredicted RBP8.53□□□□□ -1.04
DCLK1-208ENST00000615680 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
DCLK1-208ENST00000615680 PLEKHO1Q53GL0 409 aaPredicted RBP8.53□□□□□ -1.04
DCLK1-208ENST00000615680 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
DCLK1-208ENST00000615680 MSNP26038 577 aaKnown RBP8.53□□□□□ -1.04
DCLK1-208ENST00000615680 TSPYL4Q9UJ04 414 aa8.52□□□□□ -1.04
DCLK1-208ENST00000615680 MRC2Q9UBG0 1479 aa8.52□□□□□ -1.05
DCLK1-208ENST00000615680 HSP90AB4PQ58FF6 505 aa8.52□□□□□ -1.05
DCLK1-208ENST00000615680 FKBP5Q13451 457 aaPredicted RBP8.52□□□□□ -1.05
DCLK1-208ENST00000615680 AQRO60306 1485 aaKnown RBP eCLIP8.52□□□□□ -1.05
DCLK1-208ENST00000615680 ST20-MTHFSA0A0A6YYL1 179 aa8.52□□□□□ -1.05
DCLK1-208ENST00000615680 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
DCLK1-208ENST00000615680 RRP7AQ9Y3A4 280 aaKnown RBP8.51□□□□□ -1.05
DCLK1-208ENST00000615680 PRG4Q92954 1404 aaPredicted RBP8.51□□□□□ -1.05
DCLK1-208ENST00000615680 CPLX1O14810 134 aa8.51□□□□□ -1.05
DCLK1-208ENST00000615680 ZKSCAN1P17029 563 aaPredicted RBP8.51□□□□□ -1.05
DCLK1-208ENST00000615680 NFXL1Q6ZNB6 911 aa8.51□□□□□ -1.05
DCLK1-208ENST00000615680 PRDM11Q9NQV5 511 aa8.51□□□□□ -1.05
DCLK1-208ENST00000615680 API5Q9BZZ5 524 aaKnown RBP8.5□□□□□ -1.05
DCLK1-208ENST00000615680 MFAP1P55081 439 aaKnown RBP8.5□□□□□ -1.05
DCLK1-208ENST00000615680 RNF20Q5VTR2 975 aa8.5□□□□□ -1.05
DCLK1-208ENST00000615680 TPM1P09493 284 aa8.5□□□□□ -1.05
DCLK1-208ENST00000615680 RRBP1Q9P2E9 1410 aaKnown RBP8.5□□□□□ -1.05
DCLK1-208ENST00000615680 SLC3A2P08195 630 aaKnown RBP8.5□□□□□ -1.05
DCLK1-208ENST00000615680 GNL3LQ9NVN8 582 aaKnown RBP8.5□□□□□ -1.05
DCLK1-208ENST00000615680 IFT140Q96RY7 1462 aa8.5□□□□□ -1.05
DCLK1-208ENST00000615680 MYBBP1AQ9BQG0 1328 aaKnown RBP8.5□□□□□ -1.05
DCLK1-208ENST00000615680 AIMP1Q12904 312 aaKnown RBP8.49□□□□□ -1.05
DCLK1-208ENST00000615680 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 PHF14O94880 888 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 ZKSCAN2Q63HK3 967 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 CUX1P39880 1505 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 E9PSI1 815 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 NOL8Q76FK4 1167 aaKnown RBP8.49□□□□□ -1.05
DCLK1-208ENST00000615680 SPG7Q9UQ90 795 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 RIPK4P57078 832 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 TBC1D2BQ9UPU7 963 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 ATP6V1DQ9Y5K8 247 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 RAD54L2Q9Y4B4 1467 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 FYCO1Q9BQS8 1478 aa8.49□□□□□ -1.05
DCLK1-208ENST00000615680 PLEKHH2Q8IVE3 1493 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 FAM177BA6PVY3 158 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 FYB1O15117 783 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 GNAI1P63096 354 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 HOOK1Q9UJC3 728 aaKnown RBP8.48□□□□□ -1.05
DCLK1-208ENST00000615680 PLIN1O60240 522 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 CABP4P57796 275 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 ERC2O15083 957 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 NEUROD6Q96NK8 337 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 ANKRD20A12PQ8NF67 263 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
DCLK1-208ENST00000615680 SLC52A1Q9NWF4 448 aa8.48□□□□□ -1.05
DCLK1-208ENST00000615680 ANKRD45Q5TZF3 282 aa8.47□□□□□ -1.05
DCLK1-208ENST00000615680 SAFBQ15424 915 aaKnown RBP eCLIP8.47□□□□□ -1.05
DCLK1-208ENST00000615680 BRMS1Q9HCU9 246 aa8.47□□□□□ -1.05
DCLK1-208ENST00000615680 RALYLQ86SE5 291 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms