RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 MSNP26038 577 aaKnown RBP14.86□□□□□ -0.03
CDH5-208ENST00000614547 DISP3Q9P2K9 1392 aa14.86□□□□□ -0.03
CDH5-208ENST00000614547 TEX14Q8IWB6 1497 aa14.85□□□□□ -0.03
CDH5-208ENST00000614547 MCM4P33991 863 aa14.85□□□□□ -0.03
CDH5-208ENST00000614547 CHMP5Q9NZZ3 219 aa14.85□□□□□ -0.03
CDH5-208ENST00000614547 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
CDH5-208ENST00000614547 XRCC6P12956 609 aaKnown RBP eCLIP14.85□□□□□ -0.03
CDH5-208ENST00000614547 KDM5BQ9UGL1 1544 aa14.85□□□□□ -0.03
CDH5-208ENST00000614547 DNTTIP2Q5QJE6 756 aaKnown RBP14.84□□□□□ -0.03
CDH5-208ENST00000614547 LNPKQ9C0E8 428 aa14.84□□□□□ -0.03
CDH5-208ENST00000614547 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
CDH5-208ENST00000614547 PTMAP06454 111 aaKnown RBP14.84□□□□□ -0.03
CDH5-208ENST00000614547 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
CDH5-208ENST00000614547 ELL2O00472 640 aaPredicted RBP14.83□□□□□ -0.03
CDH5-208ENST00000614547 DENND4BO75064 1496 aaPredicted RBP14.83□□□□□ -0.04
CDH5-208ENST00000614547 ARHGEF11O15085 1522 aa14.83□□□□□ -0.04
CDH5-208ENST00000614547 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
CDH5-208ENST00000614547 EFCAB2Q5VUJ9 269 aa14.83□□□□□ -0.04
CDH5-208ENST00000614547 PER1O15534 1290 aaPredicted RBP14.83□□□□□ -0.04
CDH5-208ENST00000614547 GBP4Q96PP9 640 aa14.82□□□□□ -0.04
CDH5-208ENST00000614547 FAM13BQ9NYF5 915 aa14.82□□□□□ -0.04
CDH5-208ENST00000614547 TRAK1Q9UPV9 953 aa14.82□□□□□ -0.04
CDH5-208ENST00000614547 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
CDH5-208ENST00000614547 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
CDH5-208ENST00000614547 PLCB2Q00722 1185 aa14.82□□□□□ -0.04
CDH5-208ENST00000614547 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
CDH5-208ENST00000614547 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
CDH5-208ENST00000614547 RAPGEF3O95398 923 aa14.81□□□□□ -0.04
CDH5-208ENST00000614547 FOXD4L6Q3SYB3 417 aaPredicted RBP14.81□□□□□ -0.04
CDH5-208ENST00000614547 FOXD4L3Q6VB84 417 aaPredicted RBP14.81□□□□□ -0.04
CDH5-208ENST00000614547 ROCK1Q13464 1354 aa14.81□□□□□ -0.04
CDH5-208ENST00000614547 TCP11L2Q8N4U5 519 aa14.81□□□□□ -0.04
CDH5-208ENST00000614547 TSR2Q969E8 191 aaKnown RBP14.81□□□□□ -0.04
CDH5-208ENST00000614547 ZMYND15Q9H091 742 aa14.81□□□□□ -0.04
CDH5-208ENST00000614547 MAGI3Q5TCQ9 1506 aa14.81□□□□□ -0.04
CDH5-208ENST00000614547 DDX49Q9Y6V7 483 aaKnown RBP14.8□□□□□ -0.04
CDH5-208ENST00000614547 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
CDH5-208ENST00000614547 MRE11P49959 708 aa14.79□□□□□ -0.04
CDH5-208ENST00000614547 GRPEL1Q9HAV7 217 aa14.79□□□□□ -0.04
CDH5-208ENST00000614547 PCDHB15Q9Y5E8 787 aa14.79□□□□□ -0.04
CDH5-208ENST00000614547 PARD3Q8TEW0 1356 aa14.79□□□□□ -0.04
CDH5-208ENST00000614547 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
CDH5-208ENST00000614547 ESPNB1AK53 854 aa14.78□□□□□ -0.04
CDH5-208ENST00000614547 NOL8Q76FK4 1167 aaKnown RBP14.78□□□□□ -0.04
CDH5-208ENST00000614547 ANKRD45Q5TZF3 282 aa14.78□□□□□ -0.04
CDH5-208ENST00000614547 ERBINQ96RT1 1412 aa14.78□□□□□ -0.04
CDH5-208ENST00000614547 DDX11L8A8MPP1 907 aa14.78□□□□□ -0.04
CDH5-208ENST00000614547 SPAG9O60271 1321 aaKnown RBP14.77□□□□□ -0.04
CDH5-208ENST00000614547 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
CDH5-208ENST00000614547 ZKSCAN2Q63HK3 967 aa14.77□□□□□ -0.04
CDH5-208ENST00000614547 MPNDQ8N594 471 aa14.77□□□□□ -0.04
CDH5-208ENST00000614547 CUL7Q14999 1698 aa14.77□□□□□ -0.05
CDH5-208ENST00000614547 DZIP1LQ8IYY4 767 aaKnown RBP14.77□□□□□ -0.05
CDH5-208ENST00000614547 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
CDH5-208ENST00000614547 STK26Q9P289 416 aa14.76□□□□□ -0.05
CDH5-208ENST00000614547 PDE3AQ14432 1141 aa14.76□□□□□ -0.05
CDH5-208ENST00000614547 WWC1Q8IX03 1113 aa14.76□□□□□ -0.05
CDH5-208ENST00000614547 NUP153P49790 1475 aaKnown RBP14.76□□□□□ -0.05
CDH5-208ENST00000614547 RLBP1P12271 317 aa14.75□□□□□ -0.05
CDH5-208ENST00000614547 C9orf84Q5VXU9 1444 aa14.75□□□□□ -0.05
CDH5-208ENST00000614547 C1orf115Q9H7X2 142 aa14.75□□□□□ -0.05
CDH5-208ENST00000614547 PZPP20742 1482 aa14.74□□□□□ -0.05
CDH5-208ENST00000614547 R3HCC1Q9Y3T6 440 aaKnown RBP14.74□□□□□ -0.05
CDH5-208ENST00000614547 TESK2Q96S53 571 aa14.74□□□□□ -0.05
CDH5-208ENST00000614547 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
CDH5-208ENST00000614547 MTHFSP49914 203 aa14.73□□□□□ -0.05
CDH5-208ENST00000614547 DISP1Q96F81 1524 aa14.73□□□□□ -0.05
CDH5-208ENST00000614547 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
CDH5-208ENST00000614547 CAMSAP2Q08AD1 1489 aa14.73□□□□□ -0.05
CDH5-208ENST00000614547 CALD1Q05682 793 aaKnown RBP14.72□□□□□ -0.05
CDH5-208ENST00000614547 SLC12A5Q9H2X9 1139 aa14.72□□□□□ -0.05
CDH5-208ENST00000614547 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
CDH5-208ENST00000614547 TBC1D32Q96NH3 1257 aa14.72□□□□□ -0.05
CDH5-208ENST00000614547 EXOSC9Q06265 439 aaKnown RBP14.71□□□□□ -0.05
CDH5-208ENST00000614547 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.05
CDH5-208ENST00000614547 MCTP1Q6DN14 999 aa14.71□□□□□ -0.05
CDH5-208ENST00000614547 KIAA1211Q6ZU35 1233 aa14.71□□□□□ -0.05
CDH5-208ENST00000614547 RARSP54136 660 aaKnown RBP14.71□□□□□ -0.05
CDH5-208ENST00000614547 NASPP49321 788 aaPredicted RBP14.71□□□□□ -0.06
CDH5-208ENST00000614547 SRPK2P78362 688 aaKnown RBP14.7□□□□□ -0.06
CDH5-208ENST00000614547 AMER1Q5JTC6 1135 aaPredicted RBP14.7□□□□□ -0.06
CDH5-208ENST00000614547 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
CDH5-208ENST00000614547 RUNDC1Q96C34 613 aa14.7□□□□□ -0.06
CDH5-208ENST00000614547 ADAMTS12P58397 1594 aa14.7□□□□□ -0.06
CDH5-208ENST00000614547 TCOF1Q13428 1488 aaKnown RBP14.7□□□□□ -0.06
CDH5-208ENST00000614547 TMEM132EQ6IEE7 984 aa14.7□□□□□ -0.06
CDH5-208ENST00000614547 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
CDH5-208ENST00000614547 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
CDH5-208ENST00000614547 ATP10BO94823 1461 aa14.69□□□□□ -0.06
CDH5-208ENST00000614547 RALGAPBQ86X10 1494 aa14.69□□□□□ -0.06
CDH5-208ENST00000614547 ESF1Q9H501 851 aaKnown RBP14.69□□□□□ -0.06
CDH5-208ENST00000614547 WDR62O43379 1518 aa14.69□□□□□ -0.06
CDH5-208ENST00000614547 CAVIN1Q6NZI2 390 aaKnown RBP14.69□□□□□ -0.06
CDH5-208ENST00000614547 EIF3AQ14152 1382 aaKnown RBP14.68□□□□□ -0.06
CDH5-208ENST00000614547 NKTRP30414 1462 aaKnown RBP14.67□□□□□ -0.06
CDH5-208ENST00000614547 TNPO1Q92973 898 aaKnown RBP14.67□□□□□ -0.06
CDH5-208ENST00000614547 NOB1Q9ULX3 412 aaKnown RBP14.66□□□□□ -0.06
CDH5-208ENST00000614547 RRP9O43818 475 aaKnown RBP14.65□□□□□ -0.06
CDH5-208ENST00000614547 CLCN1P35523 988 aa14.65□□□□□ -0.06
CDH5-208ENST00000614547 MVPQ14764 893 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms