RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 CDCA7LQ96GN5 454 aa26.5■■□□□ 1.83
SMARCD2-212ENST00000613943 STAC3Q96MF2 364 aa26.5■■□□□ 1.83
SMARCD2-212ENST00000613943 MROH2AA6NES4 1674 aa26.5■■□□□ 1.83
SMARCD2-212ENST00000613943 NPATQ14207 1427 aa26.5■■□□□ 1.83
SMARCD2-212ENST00000613943 RNF123Q5XPI4 1314 aa26.5■■□□□ 1.83
SMARCD2-212ENST00000613943 ABCA6Q8N139 1617 aa26.48■■□□□ 1.83
SMARCD2-212ENST00000613943 AMER1Q5JTC6 1135 aaPredicted RBP26.48■■□□□ 1.83
SMARCD2-212ENST00000613943 MAP3K4Q9Y6R4 1608 aa26.47■■□□□ 1.83
SMARCD2-212ENST00000613943 NOS1P29475 1434 aa26.47■■□□□ 1.83
SMARCD2-212ENST00000613943 EIF3AQ14152 1382 aaKnown RBP26.46■■□□□ 1.83
SMARCD2-212ENST00000613943 NUTM2DQ5VT03 806 aaPredicted RBP26.45■■□□□ 1.83
SMARCD2-212ENST00000613943 MLH3Q9UHC1 1453 aa26.45■■□□□ 1.82
SMARCD2-212ENST00000613943 PPP2R1AP30153 589 aa26.44■■□□□ 1.82
SMARCD2-212ENST00000613943 CDCA8Q53HL2 280 aa26.44■■□□□ 1.82
SMARCD2-212ENST00000613943 SENP3Q9H4L4 574 aaPredicted RBP26.44■■□□□ 1.82
SMARCD2-212ENST00000613943 MYOM2P54296 1465 aa26.44■■□□□ 1.82
SMARCD2-212ENST00000613943 HECW2Q9P2P5 1572 aa26.44■■□□□ 1.82
SMARCD2-212ENST00000613943 KIF1BO60333 1816 aa26.44■■□□□ 1.82
SMARCD2-212ENST00000613943 ADAMTS8Q9UP79 889 aa26.43■■□□□ 1.82
SMARCD2-212ENST00000613943 LMTK2Q8IWU2 1503 aa26.43■■□□□ 1.82
SMARCD2-212ENST00000613943 SYNMO15061 1565 aa26.4■■□□□ 1.82
SMARCD2-212ENST00000613943 TMEM132EQ6IEE7 984 aa26.4■■□□□ 1.82
SMARCD2-212ENST00000613943 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
SMARCD2-212ENST00000613943 TRAK1Q9UPV9 953 aa26.4■■□□□ 1.82
SMARCD2-212ENST00000613943 CFAP74Q9C0B2 1584 aa26.4■■□□□ 1.82
SMARCD2-212ENST00000613943 MYOM1P52179 1685 aa26.39■■□□□ 1.82
SMARCD2-212ENST00000613943 ERVK-7P63135 1459 aa26.38■■□□□ 1.81
SMARCD2-212ENST00000613943 BLMP54132 1417 aaPredicted RBP26.38■■□□□ 1.81
SMARCD2-212ENST00000613943 NEURL4Q96JN8 1562 aa26.38■■□□□ 1.81
SMARCD2-212ENST00000613943 ADGRB3O60242 1522 aa26.38■■□□□ 1.81
SMARCD2-212ENST00000613943 RCAN3Q9UKA8 241 aa26.38■■□□□ 1.81
SMARCD2-212ENST00000613943 CCDC136Q96JN2 1154 aa26.37■■□□□ 1.81
SMARCD2-212ENST00000613943 KIAA1210Q9ULL0 1709 aa26.37■■□□□ 1.81
SMARCD2-212ENST00000613943 IFT172Q9UG01 1749 aa26.36■■□□□ 1.81
SMARCD2-212ENST00000613943 RRP1P56182 461 aaKnown RBP26.36■■□□□ 1.81
SMARCD2-212ENST00000613943 ABCC3O15438 1527 aa26.35■■□□□ 1.81
SMARCD2-212ENST00000613943 ASXL1Q8IXJ9 1541 aa26.34■■□□□ 1.81
SMARCD2-212ENST00000613943 CARD14Q9BXL6 1004 aa26.34■■□□□ 1.81
SMARCD2-212ENST00000613943 NRXN1Q9ULB1 1477 aa26.34■■□□□ 1.81
SMARCD2-212ENST00000613943 KDM5AP29375 1690 aaKnown RBP26.32■■□□□ 1.8
SMARCD2-212ENST00000613943 WDR43Q15061 677 aaKnown RBP eCLIP26.32■■□□□ 1.8
SMARCD2-212ENST00000613943 YEATS2Q9ULM3 1422 aa26.31■■□□□ 1.8
SMARCD2-212ENST00000613943 NEO1Q92859 1461 aa26.3■■□□□ 1.8
SMARCD2-212ENST00000613943 PDE3BQ13370 1112 aa26.3■■□□□ 1.8
SMARCD2-212ENST00000613943 EXOC6Q8TAG9 804 aa26.3■■□□□ 1.8
SMARCD2-212ENST00000613943 CENPJQ9HC77 1338 aaPredicted RBP26.3■■□□□ 1.8
SMARCD2-212ENST00000613943 PIK3C2GO75747 1445 aa26.29■■□□□ 1.8
SMARCD2-212ENST00000613943 PLIN1O60240 522 aa26.29■■□□□ 1.8
SMARCD2-212ENST00000613943 SIGLEC1Q9BZZ2 1709 aa26.28■■□□□ 1.8
SMARCD2-212ENST00000613943 DIP2CQ9Y2E4 1556 aa26.28■■□□□ 1.8
SMARCD2-212ENST00000613943 C14orf93Q9H972 538 aaKnown RBP26.28■■□□□ 1.8
SMARCD2-212ENST00000613943 CCDC146Q8IYE0 955 aa26.27■■□□□ 1.8
SMARCD2-212ENST00000613943 PLEKHH1Q9ULM0 1364 aa26.26■■□□□ 1.79
SMARCD2-212ENST00000613943 MSH5O43196 834 aa26.25■■□□□ 1.79
SMARCD2-212ENST00000613943 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
SMARCD2-212ENST00000613943 SLC12A5Q9H2X9 1139 aa26.23■■□□□ 1.79
SMARCD2-212ENST00000613943 PPLO60437 1756 aa26.23■■□□□ 1.79
SMARCD2-212ENST00000613943 IDI1Q13907 227 aa26.23■■□□□ 1.79
SMARCD2-212ENST00000613943 ZMYM4Q5VZL5 1548 aa26.22■■□□□ 1.79
SMARCD2-212ENST00000613943 ADGRB1O14514 1584 aa26.21■■□□□ 1.79
SMARCD2-212ENST00000613943 TNNT2P45379 298 aaPredicted RBP26.21■■□□□ 1.79
SMARCD2-212ENST00000613943 INSRP06213 1382 aa26.21■■□□□ 1.79
SMARCD2-212ENST00000613943 SAFB2Q14151 953 aaKnown RBP eCLIP26.21■■□□□ 1.79
SMARCD2-212ENST00000613943 RICTORQ6R327 1708 aa26.19■■□□□ 1.78
SMARCD2-212ENST00000613943 NPC1L1Q9UHC9 1359 aa26.19■■□□□ 1.78
SMARCD2-212ENST00000613943 FAM69CQ0P6D2 419 aa26.19■■□□□ 1.78
SMARCD2-212ENST00000613943 SETBP1Q9Y6X0 1596 aa26.18■■□□□ 1.78
SMARCD2-212ENST00000613943 ANP32EQ9BTT0 268 aa26.18■■□□□ 1.78
SMARCD2-212ENST00000613943 MYO3AQ8NEV4 1616 aa26.17■■□□□ 1.78
SMARCD2-212ENST00000613943 SBNO2Q9Y2G9 1366 aa26.17■■□□□ 1.78
SMARCD2-212ENST00000613943 RPGRIP1LQ68CZ1 1315 aa26.16■■□□□ 1.78
SMARCD2-212ENST00000613943 SLC24A1O60721 1099 aa26.16■■□□□ 1.78
SMARCD2-212ENST00000613943 NSD3Q9BZ95 1437 aa26.16■■□□□ 1.78
SMARCD2-212ENST00000613943 FBXO31Q5XUX0 539 aaPredicted RBP26.15■■□□□ 1.78
SMARCD2-212ENST00000613943 STK26Q9P289 416 aa26.14■■□□□ 1.78
SMARCD2-212ENST00000613943 APAF1O14727 1248 aa26.14■■□□□ 1.77
SMARCD2-212ENST00000613943 QRICH2Q9H0J4 1663 aa26.14■■□□□ 1.77
SMARCD2-212ENST00000613943 VGFO15240 615 aaPredicted RBP26.13■■□□□ 1.77
SMARCD2-212ENST00000613943 DUSP27Q5VZP5 1158 aa26.13■■□□□ 1.77
SMARCD2-212ENST00000613943 NEXMIFQ5QGS0 1516 aa26.12■■□□□ 1.77
SMARCD2-212ENST00000613943 C20orf194Q5TEA3 1177 aa26.12■■□□□ 1.77
SMARCD2-212ENST00000613943 FANCIQ9NVI1 1328 aa26.12■■□□□ 1.77
SMARCD2-212ENST00000613943 PIK3C2BO00750 1634 aa26.11■■□□□ 1.77
SMARCD2-212ENST00000613943 ZNF521Q96K83 1311 aa26.11■■□□□ 1.77
SMARCD2-212ENST00000613943 SPINK5Q9NQ38 1064 aaPredicted RBP26.1■■□□□ 1.77
SMARCD2-212ENST00000613943 CRBNQ96SW2 442 aa26.1■■□□□ 1.77
SMARCD2-212ENST00000613943 GLI2P10070 1586 aa26.09■■□□□ 1.77
SMARCD2-212ENST00000613943 CABP2Q9NPB3 220 aa26.09■■□□□ 1.77
SMARCD2-212ENST00000613943 GOLGA2Q08379 1002 aa26.09■■□□□ 1.77
SMARCD2-212ENST00000613943 MORC1Q86VD1 984 aa26.08■■□□□ 1.77
SMARCD2-212ENST00000613943 ZC3H13Q5T200 1668 aaKnown RBP26.07■■□□□ 1.76
SMARCD2-212ENST00000613943 ARHGAP31Q2M1Z3 1444 aa26.06■■□□□ 1.76
SMARCD2-212ENST00000613943 DMRT2Q9Y5R5 561 aa26.05■■□□□ 1.76
SMARCD2-212ENST00000613943 SKAP1Q86WV1 359 aa26.04■■□□□ 1.76
SMARCD2-212ENST00000613943 SLC52A1Q9NWF4 448 aa26.04■■□□□ 1.76
SMARCD2-212ENST00000613943 TSPOAP1O95153 1857 aa26.03■■□□□ 1.76
SMARCD2-212ENST00000613943 TULP4Q9NRJ4 1543 aa26.02■■□□□ 1.76
SMARCD2-212ENST00000613943 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
SMARCD2-212ENST00000613943 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
SMARCD2-212ENST00000613943 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms