RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 IQGAP3Q86VI3 1631 aa16.87■□□□□ 0.29
SLIRP-212ENST00000613856 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
SLIRP-212ENST00000613856 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
SLIRP-212ENST00000613856 TMEM2Q9UHN6 1383 aa16.84■□□□□ 0.29
SLIRP-212ENST00000613856 TET3O43151 1660 aa16.84■□□□□ 0.29
SLIRP-212ENST00000613856 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
SLIRP-212ENST00000613856 SLC26A8Q96RN1 970 aa16.83■□□□□ 0.28
SLIRP-212ENST00000613856 ARHGAP31Q2M1Z3 1444 aa16.82■□□□□ 0.28
SLIRP-212ENST00000613856 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
SLIRP-212ENST00000613856 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
SLIRP-212ENST00000613856 NWD1Q149M9 1564 aa16.8■□□□□ 0.28
SLIRP-212ENST00000613856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.284e-8■■■■□ 19.3
SLIRP-212ENST00000613856 EID1Q9Y6B2 187 aa16.79■□□□□ 0.28
SLIRP-212ENST00000613856 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
SLIRP-212ENST00000613856 NUP155O75694 1391 aa16.78■□□□□ 0.28
SLIRP-212ENST00000613856 LRP6O75581 1613 aa16.78■□□□□ 0.28
SLIRP-212ENST00000613856 PROSER2Q86WR7 435 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-212ENST00000613856 KDM5AP29375 1690 aaKnown RBP16.78■□□□□ 0.28
SLIRP-212ENST00000613856 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-212ENST00000613856 KCNA6P17658 529 aa16.77■□□□□ 0.28
SLIRP-212ENST00000613856 IDI1Q13907 227 aa16.77■□□□□ 0.28
SLIRP-212ENST00000613856 LMTK2Q8IWU2 1503 aa16.76■□□□□ 0.27
SLIRP-212ENST00000613856 MPHOSPH9Q99550 1183 aa16.76■□□□□ 0.27
SLIRP-212ENST00000613856 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
SLIRP-212ENST00000613856 NKTRP30414 1462 aaKnown RBP16.74■□□□□ 0.27
SLIRP-212ENST00000613856 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
SLIRP-212ENST00000613856 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
SLIRP-212ENST00000613856 KANK1Q14678 1352 aa16.74■□□□□ 0.27
SLIRP-212ENST00000613856 ZEB1P37275 1124 aaPredicted RBP16.73■□□□□ 0.27
SLIRP-212ENST00000613856 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
SLIRP-212ENST00000613856 E9PCH4 1651 aa16.72■□□□□ 0.27
SLIRP-212ENST00000613856 NOS1P29475 1434 aa16.7■□□□□ 0.26
SLIRP-212ENST00000613856 MSH6P52701 1360 aa16.7■□□□□ 0.26
SLIRP-212ENST00000613856 JCADQ9P266 1359 aa16.7■□□□□ 0.26
SLIRP-212ENST00000613856 SLAIN2Q9P270 581 aa16.7■□□□□ 0.26
SLIRP-212ENST00000613856 ANKRD30BQ9BXX2 1392 aa16.69■□□□□ 0.26
SLIRP-212ENST00000613856 UPF1Q92900 1129 aaKnown RBP eCLIP16.69■□□□□ 0.26
SLIRP-212ENST00000613856 SPHKAPQ2M3C7 1700 aa16.67■□□□□ 0.26
SLIRP-212ENST00000613856 ZFYVE9O95405 1425 aa16.67■□□□□ 0.26
SLIRP-212ENST00000613856 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.67■□□□□ 0.26
SLIRP-212ENST00000613856 BCANQ96GW7 911 aa16.66■□□□□ 0.26
SLIRP-212ENST00000613856 RPRD2Q5VT52 1461 aaKnown RBP16.66■□□□□ 0.26
SLIRP-212ENST00000613856 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
SLIRP-212ENST00000613856 TMEM131LA2VDJ0 1609 aa16.64■□□□□ 0.25
SLIRP-212ENST00000613856 TRPM2O94759 1503 aa16.64■□□□□ 0.25
SLIRP-212ENST00000613856 AHDC1Q5TGY3 1603 aaPredicted RBP16.63■□□□□ 0.25
SLIRP-212ENST00000613856 DIP2AQ14689 1571 aa16.63■□□□□ 0.25
SLIRP-212ENST00000613856 PLEKHG1Q9ULL1 1385 aa16.62■□□□□ 0.25
SLIRP-212ENST00000613856 RIMS2Q9UQ26 1411 aa16.62■□□□□ 0.25
SLIRP-212ENST00000613856 FOXD1Q16676 465 aa16.61■□□□□ 0.25
SLIRP-212ENST00000613856 NUTM2DQ5VT03 806 aaPredicted RBP16.61■□□□□ 0.25
SLIRP-212ENST00000613856 MEX3CQ5U5Q3 659 aaKnown RBP16.6■□□□□ 0.25
SLIRP-212ENST00000613856 ADAMTS13Q76LX8 1427 aa16.6■□□□□ 0.25
SLIRP-212ENST00000613856 TIMELESSQ9UNS1 1208 aa16.59■□□□□ 0.25
SLIRP-212ENST00000613856 SPATA31A6Q5VVP1 1343 aa16.59■□□□□ 0.25
SLIRP-212ENST00000613856 SRCAPQ6ZRS2 3230 aa16.57■□□□□ 0.24
SLIRP-212ENST00000613856 SIN3AQ96ST3 1273 aa16.57■□□□□ 0.24
SLIRP-212ENST00000613856 CCDC144AA2RUR9 1427 aa16.56■□□□□ 0.24
SLIRP-212ENST00000613856 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
SLIRP-212ENST00000613856 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
SLIRP-212ENST00000613856 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
SLIRP-212ENST00000613856 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
SLIRP-212ENST00000613856 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
SLIRP-212ENST00000613856 SLC52A1Q9NWF4 448 aa16.56■□□□□ 0.24
SLIRP-212ENST00000613856 CLTCL1P53675 1640 aa16.56■□□□□ 0.24
SLIRP-212ENST00000613856 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
SLIRP-212ENST00000613856 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
SLIRP-212ENST00000613856 BRINP3Q76B58 766 aa16.54■□□□□ 0.24
SLIRP-212ENST00000613856 TONSLQ96HA7 1378 aa16.53■□□□□ 0.24
SLIRP-212ENST00000613856 RXRBP28702 533 aa16.53■□□□□ 0.24
SLIRP-212ENST00000613856 TBX22Q9Y458 520 aa16.53■□□□□ 0.24
SLIRP-212ENST00000613856 RGS12O14924 1447 aa16.53■□□□□ 0.24
SLIRP-212ENST00000613856 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.24
SLIRP-212ENST00000613856 KIF1BO60333 1816 aa16.52■□□□□ 0.24
SLIRP-212ENST00000613856 AFF2P51816 1311 aa16.52■□□□□ 0.24
SLIRP-212ENST00000613856 ASXL1Q8IXJ9 1541 aa16.52■□□□□ 0.24
SLIRP-212ENST00000613856 NEUROD1Q13562 356 aa16.52■□□□□ 0.24
SLIRP-212ENST00000613856 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
SLIRP-212ENST00000613856 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
SLIRP-212ENST00000613856 NRXN3Q9Y4C0 1643 aa16.51■□□□□ 0.23
SLIRP-212ENST00000613856 NCOA3Q9Y6Q9 1424 aa16.51■□□□□ 0.23
SLIRP-212ENST00000613856 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
SLIRP-212ENST00000613856 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
SLIRP-212ENST00000613856 XRN1Q8IZH2 1706 aaKnown RBP16.5■□□□□ 0.23
SLIRP-212ENST00000613856 ATF3P18847 181 aa16.49■□□□□ 0.23
SLIRP-212ENST00000613856 CADPS2Q86UW7 1296 aa16.49■□□□□ 0.23
SLIRP-212ENST00000613856 MST1RQ04912 1400 aa16.47■□□□□ 0.23
SLIRP-212ENST00000613856 SPATA31E1Q6ZUB1 1445 aa16.47■□□□□ 0.23
SLIRP-212ENST00000613856 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
SLIRP-212ENST00000613856 NALCNQ8IZF0 1738 aa16.45■□□□□ 0.22
SLIRP-212ENST00000613856 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
SLIRP-212ENST00000613856 IFT172Q9UG01 1749 aa16.45■□□□□ 0.22
SLIRP-212ENST00000613856 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
SLIRP-212ENST00000613856 PIK3R4Q99570 1358 aa16.43■□□□□ 0.22
SLIRP-212ENST00000613856 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.42■□□□□ 0.22
SLIRP-212ENST00000613856 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
SLIRP-212ENST00000613856 L3MBTL2Q969R5 705 aa16.41■□□□□ 0.22
SLIRP-212ENST00000613856 QTRT2Q9H974 415 aaKnown RBP16.41■□□□□ 0.22
SLIRP-212ENST00000613856 DCCP43146 1447 aa16.41■□□□□ 0.22
SLIRP-212ENST00000613856 METP08581 1390 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms