RNA–Protein interactions for RNA: ENST00000613593.1

PCDHA12-202, Transcript of protocadherin alpha 12, humanhuman

BASIC

Gene PCDHA12, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-202ENST00000613593 C8orf34Q49A92 452 aa22.86■■□□□ 1.25
PCDHA12-202ENST00000613593 PRKCSHP14314 528 aaPredicted RBP22.86■■□□□ 1.25
PCDHA12-202ENST00000613593 CENPQQ7L2Z9 268 aaPredicted RBP22.86■■□□□ 1.25
PCDHA12-202ENST00000613593 ATP10AO60312 1499 aa22.86■■□□□ 1.25
PCDHA12-202ENST00000613593 TRAPPC8Q9Y2L5 1435 aa22.84■■□□□ 1.25
PCDHA12-202ENST00000613593 PPP2R1AP30153 589 aa22.84■■□□□ 1.25
PCDHA12-202ENST00000613593 FAM161AQ3B820 660 aa22.82■■□□□ 1.24
PCDHA12-202ENST00000613593 FRAT1Q92837 279 aaPredicted RBP22.82■■□□□ 1.24
PCDHA12-202ENST00000613593 RGS3P49796 1198 aa22.82■■□□□ 1.24
PCDHA12-202ENST00000613593 WDR43Q15061 677 aaKnown RBP eCLIP22.81■■□□□ 1.24
PCDHA12-202ENST00000613593 LAMC1P11047 1609 aa22.8■■□□□ 1.24
PCDHA12-202ENST00000613593 DAXXQ9UER7 740 aaPredicted RBP22.8■■□□□ 1.24
PCDHA12-202ENST00000613593 ZNF521Q96K83 1311 aa22.8■■□□□ 1.24
PCDHA12-202ENST00000613593 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.8■■□□□ 1.24
PCDHA12-202ENST00000613593 GOLGA2Q08379 1002 aa22.79■■□□□ 1.24
PCDHA12-202ENST00000613593 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
PCDHA12-202ENST00000613593 EIF2AK4Q9P2K8 1649 aaKnown RBP22.78■■□□□ 1.24
PCDHA12-202ENST00000613593 ARAP3Q8WWN8 1544 aa22.78■■□□□ 1.24
PCDHA12-202ENST00000613593 WDR7Q9Y4E6 1490 aa22.77■■□□□ 1.24
PCDHA12-202ENST00000613593 CCDC146Q8IYE0 955 aa22.77■■□□□ 1.24
PCDHA12-202ENST00000613593 SPINK5Q9NQ38 1064 aaPredicted RBP22.77■■□□□ 1.24
PCDHA12-202ENST00000613593 AMER1Q5JTC6 1135 aaPredicted RBP22.76■■□□□ 1.23
PCDHA12-202ENST00000613593 SPAG9O60271 1321 aaKnown RBP22.76■■□□□ 1.23
PCDHA12-202ENST00000613593 RTEL1-TNFRSF6BF6WH68 1400 aa22.75■■□□□ 1.23
PCDHA12-202ENST00000613593 FRAT2O75474 233 aaPredicted RBP22.75■■□□□ 1.23
PCDHA12-202ENST00000613593 SLFN5Q08AF3 891 aa22.75■■□□□ 1.23
PCDHA12-202ENST00000613593 ZFYVE16Q7Z3T8 1539 aa22.74■■□□□ 1.23
PCDHA12-202ENST00000613593 BCAR3O75815 825 aa22.72■■□□□ 1.23
PCDHA12-202ENST00000613593 AFAP1Q8N556 730 aa22.72■■□□□ 1.23
PCDHA12-202ENST00000613593 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.71■■□□□ 1.23
PCDHA12-202ENST00000613593 TRMT2AQ8IZ69 625 aaKnown RBP22.68■■□□□ 1.22
PCDHA12-202ENST00000613593 RNF17Q9BXT8 1623 aaKnown RBP22.68■■□□□ 1.22
PCDHA12-202ENST00000613593 APAF1O14727 1248 aa22.68■■□□□ 1.22
PCDHA12-202ENST00000613593 IGHDP01880 384 aa22.67■■□□□ 1.22
PCDHA12-202ENST00000613593 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
PCDHA12-202ENST00000613593 TRPM2O94759 1503 aa22.66■■□□□ 1.22
PCDHA12-202ENST00000613593 DEPDC5O75140 1603 aa22.65■■□□□ 1.22
PCDHA12-202ENST00000613593 ABCA9Q8IUA7 1624 aa22.65■■□□□ 1.22
PCDHA12-202ENST00000613593 FANCAO15360 1455 aa22.65■■□□□ 1.22
PCDHA12-202ENST00000613593 PTPRTO14522 1441 aa22.63■■□□□ 1.21
PCDHA12-202ENST00000613593 ATP7AQ04656 1500 aa22.63■■□□□ 1.21
PCDHA12-202ENST00000613593 USP19O94966 1318 aa22.63■■□□□ 1.21
PCDHA12-202ENST00000613593 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
PCDHA12-202ENST00000613593 MADDQ8WXG6 1647 aa22.62■■□□□ 1.21
PCDHA12-202ENST00000613593 SEC24BO95487 1268 aa22.62■■□□□ 1.21
PCDHA12-202ENST00000613593 SPHKAPQ2M3C7 1700 aa22.61■■□□□ 1.21
PCDHA12-202ENST00000613593 ASXL1Q8IXJ9 1541 aa22.6■■□□□ 1.21
PCDHA12-202ENST00000613593 TET3O43151 1660 aa22.6■■□□□ 1.21
PCDHA12-202ENST00000613593 EIF3AQ14152 1382 aaKnown RBP22.6■■□□□ 1.21
PCDHA12-202ENST00000613593 NKTRP30414 1462 aaKnown RBP22.59■■□□□ 1.21
PCDHA12-202ENST00000613593 PIK3C2GO75747 1445 aa22.59■■□□□ 1.21
PCDHA12-202ENST00000613593 CEP152O94986 1710 aa22.59■■□□□ 1.21
PCDHA12-202ENST00000613593 CLTCL1P53675 1640 aa22.59■■□□□ 1.21
PCDHA12-202ENST00000613593 VWDEQ8N2E2 1590 aa22.58■■□□□ 1.21
PCDHA12-202ENST00000613593 KANK1Q14678 1352 aa22.58■■□□□ 1.2
PCDHA12-202ENST00000613593 ADGRL1O94910 1474 aa22.57■■□□□ 1.2
PCDHA12-202ENST00000613593 IQGAP1P46940 1657 aa22.57■■□□□ 1.2
PCDHA12-202ENST00000613593 SYNMO15061 1565 aa22.56■■□□□ 1.2
PCDHA12-202ENST00000613593 PANK1Q8TE04 598 aa22.56■■□□□ 1.2
PCDHA12-202ENST00000613593 SCAPERQ9BY12 1400 aa22.56■■□□□ 1.2
PCDHA12-202ENST00000613593 STAC3Q96MF2 364 aa22.55■■□□□ 1.2
PCDHA12-202ENST00000613593 E9PSI1 815 aa22.55■■□□□ 1.2
PCDHA12-202ENST00000613593 CDCA8Q53HL2 280 aa22.55■■□□□ 1.2
PCDHA12-202ENST00000613593 COG6Q9Y2V7 657 aa22.54■■□□□ 1.2
PCDHA12-202ENST00000613593 KIF3BO15066 747 aa22.53■■□□□ 1.2
PCDHA12-202ENST00000613593 ASXL2Q76L83 1435 aa22.53■■□□□ 1.2
PCDHA12-202ENST00000613593 SCAF11Q99590 1463 aaKnown RBP22.53■■□□□ 1.2
PCDHA12-202ENST00000613593 MYOM1P52179 1685 aa22.52■■□□□ 1.2
PCDHA12-202ENST00000613593 POGKQ9P215 609 aa22.51■■□□□ 1.19
PCDHA12-202ENST00000613593 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
PCDHA12-202ENST00000613593 MROH1Q8NDA8 1641 aa22.5■■□□□ 1.19
PCDHA12-202ENST00000613593 CLUAP1Q96AJ1 413 aa22.5■■□□□ 1.19
PCDHA12-202ENST00000613593 SLKQ9H2G2 1235 aaPredicted RBP22.49■■□□□ 1.19
PCDHA12-202ENST00000613593 NPC1L1Q9UHC9 1359 aa22.49■■□□□ 1.19
PCDHA12-202ENST00000613593 CANXP27824 592 aaKnown RBP22.48■■□□□ 1.19
PCDHA12-202ENST00000613593 CGNL1Q0VF96 1302 aa22.48■■□□□ 1.19
PCDHA12-202ENST00000613593 CENPJQ9HC77 1338 aaPredicted RBP22.48■■□□□ 1.19
PCDHA12-202ENST00000613593 PDE3AQ14432 1141 aa22.47■■□□□ 1.19
PCDHA12-202ENST00000613593 NEURL4Q96JN8 1562 aa22.47■■□□□ 1.19
PCDHA12-202ENST00000613593 TNNQ9UQP3 1299 aa22.46■■□□□ 1.19
PCDHA12-202ENST00000613593 VIRMAQ69YN4 1812 aaKnown RBP22.46■■□□□ 1.19
PCDHA12-202ENST00000613593 NEUROD2Q15784 382 aa22.46■■□□□ 1.19
PCDHA12-202ENST00000613593 WWC1Q8IX03 1113 aa22.46■■□□□ 1.19
PCDHA12-202ENST00000613593 RRP7AQ9Y3A4 280 aaKnown RBP22.44■■□□□ 1.18
PCDHA12-202ENST00000613593 CFAP70Q5T0N1 1121 aa22.44■■□□□ 1.18
PCDHA12-202ENST00000613593 KIAA1210Q9ULL0 1709 aa22.43■■□□□ 1.18
PCDHA12-202ENST00000613593 KIDINS220Q9ULH0 1771 aa22.43■■□□□ 1.18
PCDHA12-202ENST00000613593 NLRP1Q9C000 1473 aa22.43■■□□□ 1.18
PCDHA12-202ENST00000613593 MAPK8IP3Q9UPT6 1336 aa22.43■■□□□ 1.18
PCDHA12-202ENST00000613593 EIF5BO60841 1220 aaKnown RBP22.43■■□□□ 1.18
PCDHA12-202ENST00000613593 EFCAB6Q5THR3 1501 aa22.43■■□□□ 1.18
PCDHA12-202ENST00000613593 PCDHB15Q9Y5E8 787 aa22.42■■□□□ 1.18
PCDHA12-202ENST00000613593 UGGT1Q9NYU2 1555 aa22.42■■□□□ 1.18
PCDHA12-202ENST00000613593 ZNF518AQ6AHZ1 1483 aa22.41■■□□□ 1.18
PCDHA12-202ENST00000613593 RLBP1P12271 317 aa22.41■■□□□ 1.18
PCDHA12-202ENST00000613593 MYOM2P54296 1465 aa22.41■■□□□ 1.18
PCDHA12-202ENST00000613593 BECN1Q14457 450 aa22.4■■□□□ 1.18
PCDHA12-202ENST00000613593 KDM5AP29375 1690 aaKnown RBP22.4■■□□□ 1.18
PCDHA12-202ENST00000613593 ERVK-7P63135 1459 aa22.39■■□□□ 1.18
PCDHA12-202ENST00000613593 TNNT2P45379 298 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms