RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 SEPT11Q9NVA2 429 aaKnown RBP10.17□□□□□ -0.78
ALMS1-206ENST00000613296 U2AF1L5P0DN76 240 aaPredicted RBP10.16□□□□□ -0.78
ALMS1-206ENST00000613296 U2AF1Q01081 240 aaKnown RBP eCLIP10.16□□□□□ -0.78
ALMS1-206ENST00000613296 USP8P40818 1118 aa10.15□□□□□ -0.78
ALMS1-206ENST00000613296 LRRFIP1Q32MZ4 808 aaKnown RBP10.15□□□□□ -0.78
ALMS1-206ENST00000613296 EIF3AQ14152 1382 aaKnown RBP10.15□□□□□ -0.78
ALMS1-206ENST00000613296 CPLX2Q6PUV4 134 aaKnown RBP10.15□□□□□ -0.78
ALMS1-206ENST00000613296 NF2P35240 595 aa10.15□□□□□ -0.79
ALMS1-206ENST00000613296 HDGFL2Q7Z4V5 671 aaPredicted RBP10.15□□□□□ -0.79
ALMS1-206ENST00000613296 RALBP1Q15311 655 aa10.14□□□□□ -0.79
ALMS1-206ENST00000613296 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
ALMS1-206ENST00000613296 CCDC97Q96F63 343 aaPredicted RBP10.14□□□□□ -0.79
ALMS1-206ENST00000613296 CENPHQ9H3R5 247 aa10.14□□□□□ -0.79
ALMS1-206ENST00000613296 DEF6Q9H4E7 631 aa10.14□□□□□ -0.79
ALMS1-206ENST00000613296 HMGN5P82970 282 aaKnown RBP10.14□□□□□ -0.79
ALMS1-206ENST00000613296 SASS6Q6UVJ0 657 aa10.14□□□□□ -0.79
ALMS1-206ENST00000613296 CCDC73Q6ZRK6 1079 aa10.14□□□□□ -0.79
ALMS1-206ENST00000613296 RILPL2Q969X0 211 aa10.14□□□□□ -0.79
ALMS1-206ENST00000613296 CCP110O43303 1012 aa10.13□□□□□ -0.79
ALMS1-206ENST00000613296 ANO2Q9NQ90 1003 aa10.13□□□□□ -0.79
ALMS1-206ENST00000613296 CFDP1Q9UEE9 299 aaPredicted RBP10.13□□□□□ -0.79
ALMS1-206ENST00000613296 GBP2P32456 591 aaPredicted RBP10.12□□□□□ -0.79
ALMS1-206ENST00000613296 OLFM4Q6UX06 510 aa10.12□□□□□ -0.79
ALMS1-206ENST00000613296 TAX1BP1Q86VP1 789 aa10.12□□□□□ -0.79
ALMS1-206ENST00000613296 CEP63Q96MT8 703 aa10.12□□□□□ -0.79
ALMS1-206ENST00000613296 TMEM132AQ24JP5 1023 aa10.12□□□□□ -0.79
ALMS1-206ENST00000613296 NFXL1Q6ZNB6 911 aa10.12□□□□□ -0.79
ALMS1-206ENST00000613296 REC8O95072 547 aa10.12□□□□□ -0.79
ALMS1-206ENST00000613296 CENPJQ9HC77 1338 aaPredicted RBP10.12□□□□□ -0.79
ALMS1-206ENST00000613296 VPS37CA5D8V6 355 aaPredicted RBP10.12□□□□□ -0.79
ALMS1-206ENST00000613296 LTV1Q96GA3 475 aaPredicted RBP10.12□□□□□ -0.79
ALMS1-206ENST00000613296 ZKSCAN1P17029 563 aaPredicted RBP10.11□□□□□ -0.79
ALMS1-206ENST00000613296 SYCP1Q15431 976 aa10.11□□□□□ -0.79
ALMS1-206ENST00000613296 FOSBP53539 338 aa10.11□□□□□ -0.79
ALMS1-206ENST00000613296 PLEKHD1A6NEE1 506 aa10.1□□□□□ -0.79
ALMS1-206ENST00000613296 VPS37DQ86XT2 251 aa10.1□□□□□ -0.79
ALMS1-206ENST00000613296 SAFBQ15424 915 aaKnown RBP eCLIP10.1□□□□□ -0.79
ALMS1-206ENST00000613296 CLUAP1Q96AJ1 413 aa10.1□□□□□ -0.79
ALMS1-206ENST00000613296 SCRIBQ14160 1630 aa10.1□□□□□ -0.79
ALMS1-206ENST00000613296 BRMS1Q9HCU9 246 aa10.1□□□□□ -0.79
ALMS1-206ENST00000613296 RABEP1Q15276 862 aa10.1□□□□□ -0.79
ALMS1-206ENST00000613296 SLC26A8Q96RN1 970 aa10.1□□□□□ -0.79
ALMS1-206ENST00000613296 SPATA24Q86W54 205 aa10.1□□□□□ -0.79
ALMS1-206ENST00000613296 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
ALMS1-206ENST00000613296 RUFY2Q8WXA3 655 aa10.09□□□□□ -0.79
ALMS1-206ENST00000613296 NASPP49321 788 aaPredicted RBP10.09□□□□□ -0.79
ALMS1-206ENST00000613296 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
ALMS1-206ENST00000613296 RBM33Q96EV2 1170 aaKnown RBP10.09□□□□□ -0.79
ALMS1-206ENST00000613296 SMC2O95347 1197 aa10.09□□□□□ -0.79
ALMS1-206ENST00000613296 ERICH2A1L162 156 aa10.08□□□□□ -0.8
ALMS1-206ENST00000613296 SMARCE1Q969G3 411 aa10.08□□□□□ -0.8
ALMS1-206ENST00000613296 DCAF11Q8TEB1 546 aa10.08□□□□□ -0.8
ALMS1-206ENST00000613296 KIF3BO15066 747 aa10.08□□□□□ -0.8
ALMS1-206ENST00000613296 ROCK2O75116 1388 aaKnown RBP10.08□□□□□ -0.8
ALMS1-206ENST00000613296 TRDNQ13061 729 aa10.08□□□□□ -0.8
ALMS1-206ENST00000613296 ERLIN1O75477 346 aa10.08□□□□□ -0.8
ALMS1-206ENST00000613296 CCDC112Q8NEF3 446 aa10.08□□□□□ -0.8
ALMS1-206ENST00000613296 WWC2Q6AWC2 1192 aa10.07□□□□□ -0.8
ALMS1-206ENST00000613296 IQCEQ6IPM2 695 aa10.07□□□□□ -0.8
ALMS1-206ENST00000613296 FAM193AP78312 1265 aa10.07□□□□□ -0.8
ALMS1-206ENST00000613296 TRIM5Q9C035 493 aa10.07□□□□□ -0.8
ALMS1-206ENST00000613296 GOLGA6L10A0A0M3HER8 536 aa10.07□□□□□ -0.8
ALMS1-206ENST00000613296 EIF3JO75822 258 aaKnown RBP10.06□□□□□ -0.8
ALMS1-206ENST00000613296 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
ALMS1-206ENST00000613296 HSP90AB4PQ58FF6 505 aa10.06□□□□□ -0.8
ALMS1-206ENST00000613296 MAGEC2Q9UBF1 373 aaPredicted RBP10.06□□□□□ -0.8
ALMS1-206ENST00000613296 RNF20Q5VTR2 975 aa10.06□□□□□ -0.8
ALMS1-206ENST00000613296 TICAM2Q86XR7 235 aa10.06□□□□□ -0.8
ALMS1-206ENST00000613296 NUTM2DQ5VT03 806 aaPredicted RBP10.06□□□□□ -0.8
ALMS1-206ENST00000613296 CCDC91Q7Z6B0 441 aa10.06□□□□□ -0.8
ALMS1-206ENST00000613296 STAMBPO95630 424 aa10.06□□□□□ -0.8
ALMS1-206ENST00000613296 LRRCC1Q9C099 1032 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 LUC7LQ9NQ29 371 aaKnown RBP10.05□□□□□ -0.8
ALMS1-206ENST00000613296 CCER2I3L3R5 266 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 CCDC181Q5TID7 509 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 NUTM2FA1L443 756 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 ERICH4A6NGS2 130 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 RSPH4AQ5TD94 716 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 CDK5RAP3Q96JB5 506 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 DDX23Q9BUQ8 820 aaKnown RBP10.05□□□□□ -0.8
ALMS1-206ENST00000613296 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
ALMS1-206ENST00000613296 TXLNBQ8N3L3 684 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 PPM1EQ8WY54 764 aa10.05□□□□□ -0.8
ALMS1-206ENST00000613296 AEBP1Q8IUX7 1158 aa10.04□□□□□ -0.8
ALMS1-206ENST00000613296 FEZ1Q99689 392 aa10.04□□□□□ -0.8
ALMS1-206ENST00000613296 KAT6BQ8WYB5 2073 aa10.04□□□□□ -0.8
ALMS1-206ENST00000613296 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
ALMS1-206ENST00000613296 ZNHIT6Q9NWK9 470 aaKnown RBP10.04□□□□□ -0.8
ALMS1-206ENST00000613296 CCDC146Q8IYE0 955 aa10.04□□□□□ -0.8
ALMS1-206ENST00000613296 CCDC175P0C221 793 aa10.04□□□□□ -0.8
ALMS1-206ENST00000613296 NEBLO76041 1014 aa10.04□□□□□ -0.8
ALMS1-206ENST00000613296 CFAP57Q96MR6 1250 aa10.04□□□□□ -0.8
ALMS1-206ENST00000613296 ANKRD45Q5TZF3 282 aa10.03□□□□□ -0.8
ALMS1-206ENST00000613296 NGEFQ8N5V2 710 aa10.03□□□□□ -0.8
ALMS1-206ENST00000613296 SMC3Q9UQE7 1217 aa10.03□□□□□ -0.8
ALMS1-206ENST00000613296 KINO60870 393 aaKnown RBP10.03□□□□□ -0.8
ALMS1-206ENST00000613296 CHMP5Q9NZZ3 219 aa10.03□□□□□ -0.8
ALMS1-206ENST00000613296 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
ALMS1-206ENST00000613296 KDM4AO75164 1064 aa10.03□□□□□ -0.8
ALMS1-206ENST00000613296 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms