RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 U2AF1L5P0DN76 240 aaPredicted RBP11.1□□□□□ -0.63
PDE6A-204ENST00000613228 U2AF1Q01081 240 aaKnown RBP eCLIP11.1□□□□□ -0.63
PDE6A-204ENST00000613228 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
PDE6A-204ENST00000613228 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
PDE6A-204ENST00000613228 RTF1Q92541 710 aaKnown RBP11.1□□□□□ -0.63
PDE6A-204ENST00000613228 ZNF518AQ6AHZ1 1483 aa11.1□□□□□ -0.63
PDE6A-204ENST00000613228 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
PDE6A-204ENST00000613228 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
PDE6A-204ENST00000613228 PTPRKQ15262 1439 aa11.1□□□□□ -0.63
PDE6A-204ENST00000613228 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
PDE6A-204ENST00000613228 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
PDE6A-204ENST00000613228 SYCP2Q9BX26 1530 aa11.1□□□□□ -0.63
PDE6A-204ENST00000613228 ASXL2Q76L83 1435 aa11.09□□□□□ -0.63
PDE6A-204ENST00000613228 ABCA8O94911 1581 aa11.09□□□□□ -0.63
PDE6A-204ENST00000613228 CFAP74Q9C0B2 1584 aa11.09□□□□□ -0.63
PDE6A-204ENST00000613228 E9PSI1 815 aa11.09□□□□□ -0.63
PDE6A-204ENST00000613228 ARHGEF12Q9NZN5 1544 aa11.09□□□□□ -0.63
PDE6A-204ENST00000613228 NBPF8Q3BBV2 869 aa11.08□□□□□ -0.64
PDE6A-204ENST00000613228 ABCC10Q5T3U5 1492 aa11.07□□□□□ -0.64
PDE6A-204ENST00000613228 RALGAPBQ86X10 1494 aa11.07□□□□□ -0.64
PDE6A-204ENST00000613228 PMFBP1Q8TBY8 1022 aa11.07□□□□□ -0.64
PDE6A-204ENST00000613228 COG3Q96JB2 828 aa11.07□□□□□ -0.64
PDE6A-204ENST00000613228 FRAT1Q92837 279 aaPredicted RBP11.06□□□□□ -0.64
PDE6A-204ENST00000613228 KDM5BQ9UGL1 1544 aa11.06□□□□□ -0.64
PDE6A-204ENST00000613228 TCERG1O14776 1098 aaKnown RBP11.06□□□□□ -0.64
PDE6A-204ENST00000613228 AAMPQ13685 434 aa11.05□□□□□ -0.64
PDE6A-204ENST00000613228 ARXQ96QS3 562 aa11.05□□□□□ -0.64
PDE6A-204ENST00000613228 IPO9Q96P70 1041 aaKnown RBP11.05□□□□□ -0.64
PDE6A-204ENST00000613228 RWDD1Q9H446 243 aaPredicted RBP11.04□□□□□ -0.64
PDE6A-204ENST00000613228 NUTM2DQ5VT03 806 aaPredicted RBP11.04□□□□□ -0.64
PDE6A-204ENST00000613228 NGDNQ8NEJ9 315 aaKnown RBP11.04□□□□□ -0.64
PDE6A-204ENST00000613228 SCAF11Q99590 1463 aaKnown RBP11.03□□□□□ -0.64
PDE6A-204ENST00000613228 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
PDE6A-204ENST00000613228 HDAC5Q9UQL6 1122 aa11.03□□□□□ -0.64
PDE6A-204ENST00000613228 A2MP01023 1474 aa11.02□□□□□ -0.64
PDE6A-204ENST00000613228 RUNDC1Q96C34 613 aa11.02□□□□□ -0.65
PDE6A-204ENST00000613228 NINLQ9Y2I6 1382 aa11.02□□□□□ -0.65
PDE6A-204ENST00000613228 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
PDE6A-204ENST00000613228 MAST1Q9Y2H9 1570 aa11.01□□□□□ -0.65
PDE6A-204ENST00000613228 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
PDE6A-204ENST00000613228 ADCY10Q96PN6 1610 aa11□□□□□ -0.65
PDE6A-204ENST00000613228 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
PDE6A-204ENST00000613228 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
PDE6A-204ENST00000613228 B4GALNT3Q6L9W6 998 aa11□□□□□ -0.65
PDE6A-204ENST00000613228 RRP1P56182 461 aaKnown RBP10.99□□□□□ -0.65
PDE6A-204ENST00000613228 PDE4CQ08493 712 aa10.99□□□□□ -0.65
PDE6A-204ENST00000613228 THEMISQ8N1K5 641 aaPredicted RBP10.99□□□□□ -0.65
PDE6A-204ENST00000613228 MAGI3Q5TCQ9 1506 aa10.99□□□□□ -0.65
PDE6A-204ENST00000613228 AMPHP49418 695 aa10.98□□□□□ -0.65
PDE6A-204ENST00000613228 MYO5CQ9NQX4 1742 aa10.98□□□□□ -0.65
PDE6A-204ENST00000613228 NBPF1Q3BBV0 1214 aa10.98□□□□□ -0.65
PDE6A-204ENST00000613228 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
PDE6A-204ENST00000613228 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
PDE6A-204ENST00000613228 PZPP20742 1482 aa10.98□□□□□ -0.65
PDE6A-204ENST00000613228 RAPGEF3O95398 923 aa10.98□□□□□ -0.65
PDE6A-204ENST00000613228 PPP2R1AP30153 589 aa10.97□□□□□ -0.65
PDE6A-204ENST00000613228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDE6A-204ENST00000613228 ZNF692Q9BU19 519 aaPredicted RBP10.97□□□□□ -0.65
PDE6A-204ENST00000613228 NEO1Q92859 1461 aa10.97□□□□□ -0.65
PDE6A-204ENST00000613228 NSD2O96028 1365 aa10.97□□□□□ -0.65
PDE6A-204ENST00000613228 GSE1Q14687 1217 aa10.97□□□□□ -0.65
PDE6A-204ENST00000613228 CCDC146Q8IYE0 955 aa10.97□□□□□ -0.65
PDE6A-204ENST00000613228 ATP7AQ04656 1500 aa10.97□□□□□ -0.65
PDE6A-204ENST00000613228 CENPQQ7L2Z9 268 aaPredicted RBP10.96□□□□□ -0.65
PDE6A-204ENST00000613228 STK31Q9BXU1 1019 aa10.96□□□□□ -0.65
PDE6A-204ENST00000613228 SMC4Q9NTJ3 1288 aa10.96□□□□□ -0.65
PDE6A-204ENST00000613228 TRAPPC8Q9Y2L5 1435 aa10.96□□□□□ -0.65
PDE6A-204ENST00000613228 PRAG1Q86YV5 1406 aa10.96□□□□□ -0.66
PDE6A-204ENST00000613228 SMG6Q86US8 1419 aaKnown RBP10.96□□□□□ -0.66
PDE6A-204ENST00000613228 GOLGA6L22H0YM25 854 aa10.95□□□□□ -0.66
PDE6A-204ENST00000613228 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
PDE6A-204ENST00000613228 CHD1O14646 1710 aa10.95□□□□□ -0.66
PDE6A-204ENST00000613228 PTMSP20962 102 aa10.94□□□□□ -0.66
PDE6A-204ENST00000613228 ARAP3Q8WWN8 1544 aa10.94□□□□□ -0.66
PDE6A-204ENST00000613228 HMMRO75330 724 aa10.94□□□□□ -0.66
PDE6A-204ENST00000613228 ITPRIPQ8IWB1 547 aa10.94□□□□□ -0.66
PDE6A-204ENST00000613228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.94□□□□□ -0.66
PDE6A-204ENST00000613228 PUS7Q96PZ0 661 aaKnown RBP10.94□□□□□ -0.66
PDE6A-204ENST00000613228 CT47B1P0C2W7 299 aaPredicted RBP10.93□□□□□ -0.66
PDE6A-204ENST00000613228 MSNP26038 577 aaKnown RBP10.93□□□□□ -0.66
PDE6A-204ENST00000613228 ZKSCAN2Q63HK3 967 aa10.93□□□□□ -0.66
PDE6A-204ENST00000613228 MCCP23508 829 aa10.92□□□□□ -0.66
PDE6A-204ENST00000613228 RGS3P49796 1198 aa10.92□□□□□ -0.66
PDE6A-204ENST00000613228 PRAM1Q96QH2 718 aa10.92□□□□□ -0.66
PDE6A-204ENST00000613228 C14orf93Q9H972 538 aaKnown RBP10.92□□□□□ -0.66
PDE6A-204ENST00000613228 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
PDE6A-204ENST00000613228 RRP9O43818 475 aaKnown RBP10.92□□□□□ -0.66
PDE6A-204ENST00000613228 FAM43AQ8N2R8 423 aa10.92□□□□□ -0.66
PDE6A-204ENST00000613228 IL27Q8NEV9 243 aa10.92□□□□□ -0.66
PDE6A-204ENST00000613228 TMEM132EQ6IEE7 984 aa10.92□□□□□ -0.66
PDE6A-204ENST00000613228 TXNDC2Q86VQ3 553 aa10.92□□□□□ -0.66
PDE6A-204ENST00000613228 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
PDE6A-204ENST00000613228 GNAI1P63096 354 aa10.91□□□□□ -0.66
PDE6A-204ENST00000613228 AMER1Q5JTC6 1135 aaPredicted RBP10.91□□□□□ -0.66
PDE6A-204ENST00000613228 NOS1P29475 1434 aa10.91□□□□□ -0.66
PDE6A-204ENST00000613228 KDM5DQ9BY66 1539 aa10.91□□□□□ -0.66
PDE6A-204ENST00000613228 PNISRQ8TF01 805 aaKnown RBP10.91□□□□□ -0.66
PDE6A-204ENST00000613228 CSB-PGBD3P0DP91 1061 aa10.9□□□□□ -0.66
PDE6A-204ENST00000613228 OS9Q13438 667 aaPredicted RBP10.9□□□□□ -0.66
PDE6A-204ENST00000613228 CDK19Q9BWU1 502 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms