RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 ANP32AP39687 249 aaKnown RBP23.73■■□□□ 1.39
TNIP1-221ENST00000610874 EFCAB6Q5THR3 1501 aa23.72■■□□□ 1.39
TNIP1-221ENST00000610874 DISP3Q9P2K9 1392 aa23.72■■□□□ 1.39
TNIP1-221ENST00000610874 TSPOAP1O95153 1857 aa23.72■■□□□ 1.39
TNIP1-221ENST00000610874 MAP3K4Q9Y6R4 1608 aa23.71■■□□□ 1.39
TNIP1-221ENST00000610874 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
TNIP1-221ENST00000610874 ADGRF5Q8IZF2 1346 aa23.71■■□□□ 1.39
TNIP1-221ENST00000610874 NPATQ14207 1427 aa23.7■■□□□ 1.38
TNIP1-221ENST00000610874 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
TNIP1-221ENST00000610874 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
TNIP1-221ENST00000610874 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
TNIP1-221ENST00000610874 MADDQ8WXG6 1647 aa23.67■■□□□ 1.38
TNIP1-221ENST00000610874 IPO9Q96P70 1041 aaKnown RBP23.67■■□□□ 1.38
TNIP1-221ENST00000610874 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
TNIP1-221ENST00000610874 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
TNIP1-221ENST00000610874 DIP2CQ9Y2E4 1556 aa23.65■■□□□ 1.38
TNIP1-221ENST00000610874 RICTORQ6R327 1708 aa23.65■■□□□ 1.38
TNIP1-221ENST00000610874 LRPPRCP42704 1394 aaKnown RBP23.65■■□□□ 1.38
TNIP1-221ENST00000610874 BRD4O60885 1362 aaPredicted RBP23.63■■□□□ 1.37
TNIP1-221ENST00000610874 DIP2BQ9P265 1576 aa23.63■■□□□ 1.37
TNIP1-221ENST00000610874 TMF1P82094 1093 aa23.63■■□□□ 1.37
TNIP1-221ENST00000610874 ZBTB47Q9UFB7 747 aaPredicted RBP23.62■■□□□ 1.37
TNIP1-221ENST00000610874 RRP1P56182 461 aaKnown RBP23.62■■□□□ 1.37
TNIP1-221ENST00000610874 RALBP1Q15311 655 aa23.62■■□□□ 1.37
TNIP1-221ENST00000610874 LMTK2Q8IWU2 1503 aa23.61■■□□□ 1.37
TNIP1-221ENST00000610874 ABCC3O15438 1527 aa23.61■■□□□ 1.37
TNIP1-221ENST00000610874 EXOC6Q8TAG9 804 aa23.61■■□□□ 1.37
TNIP1-221ENST00000610874 GLI2P10070 1586 aa23.6■■□□□ 1.37
TNIP1-221ENST00000610874 PANK3Q9H999 370 aa23.6■■□□□ 1.37
TNIP1-221ENST00000610874 MROH2AA6NES4 1674 aa23.59■■□□□ 1.37
TNIP1-221ENST00000610874 COL17A1Q9UMD9 1497 aaPredicted RBP23.59■■□□□ 1.37
TNIP1-221ENST00000610874 CC2D1BQ5T0F9 858 aaKnown RBP23.59■■□□□ 1.37
TNIP1-221ENST00000610874 KIF1BO60333 1816 aa23.58■■□□□ 1.37
TNIP1-221ENST00000610874 NOS1P29475 1434 aa23.58■■□□□ 1.37
TNIP1-221ENST00000610874 NPM2Q86SE8 214 aaKnown RBP23.57■■□□□ 1.36
TNIP1-221ENST00000610874 RCAN3Q9UKA8 241 aa23.57■■□□□ 1.36
TNIP1-221ENST00000610874 LAMC1P11047 1609 aa23.57■■□□□ 1.36
TNIP1-221ENST00000610874 MLECQ14165 292 aa23.56■■□□□ 1.36
TNIP1-221ENST00000610874 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
TNIP1-221ENST00000610874 PER1O15534 1290 aaPredicted RBP23.55■■□□□ 1.36
TNIP1-221ENST00000610874 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
TNIP1-221ENST00000610874 TMEM132EQ6IEE7 984 aa23.54■■□□□ 1.36
TNIP1-221ENST00000610874 SCAF11Q99590 1463 aaKnown RBP23.54■■□□□ 1.36
TNIP1-221ENST00000610874 RTL5Q5HYW3 569 aaPredicted RBP23.53■■□□□ 1.36
TNIP1-221ENST00000610874 FBXO31Q5XUX0 539 aaPredicted RBP23.53■■□□□ 1.36
TNIP1-221ENST00000610874 IDI1Q13907 227 aa23.52■■□□□ 1.36
TNIP1-221ENST00000610874 NLRP13Q86W25 1043 aa23.52■■□□□ 1.36
TNIP1-221ENST00000610874 SIGLEC1Q9BZZ2 1709 aa23.52■■□□□ 1.36
TNIP1-221ENST00000610874 CAMSAP1Q5T5Y3 1602 aa23.51■■□□□ 1.35
TNIP1-221ENST00000610874 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
TNIP1-221ENST00000610874 IQGAP1P46940 1657 aa23.49■■□□□ 1.35
TNIP1-221ENST00000610874 CDCA7LQ96GN5 454 aa23.49■■□□□ 1.35
TNIP1-221ENST00000610874 ADGRB3O60242 1522 aa23.49■■□□□ 1.35
TNIP1-221ENST00000610874 MYOM2P54296 1465 aa23.47■■□□□ 1.35
TNIP1-221ENST00000610874 PARD3Q8TEW0 1356 aa23.47■■□□□ 1.35
TNIP1-221ENST00000610874 TCERG1O14776 1098 aaKnown RBP23.46■■□□□ 1.35
TNIP1-221ENST00000610874 SYNMO15061 1565 aa23.45■■□□□ 1.34
TNIP1-221ENST00000610874 PDE4AP27815 886 aa23.45■■□□□ 1.34
TNIP1-221ENST00000610874 PDE3BQ13370 1112 aa23.44■■□□□ 1.34
TNIP1-221ENST00000610874 EIF3AQ14152 1382 aaKnown RBP23.44■■□□□ 1.34
TNIP1-221ENST00000610874 IFT172Q9UG01 1749 aa23.43■■□□□ 1.34
TNIP1-221ENST00000610874 PLIN1O60240 522 aa23.43■■□□□ 1.34
TNIP1-221ENST00000610874 NEURL4Q96JN8 1562 aa23.43■■□□□ 1.34
TNIP1-221ENST00000610874 C14orf93Q9H972 538 aaKnown RBP23.41■■□□□ 1.34
TNIP1-221ENST00000610874 ZMYM4Q5VZL5 1548 aa23.39■■□□□ 1.34
TNIP1-221ENST00000610874 NRXN1Q9ULB1 1477 aa23.39■■□□□ 1.34
TNIP1-221ENST00000610874 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.34
TNIP1-221ENST00000610874 PIK3C2GO75747 1445 aa23.39■■□□□ 1.33
TNIP1-221ENST00000610874 SAFB2Q14151 953 aaKnown RBP eCLIP23.38■■□□□ 1.33
TNIP1-221ENST00000610874 CDCA8Q53HL2 280 aa23.38■■□□□ 1.33
TNIP1-221ENST00000610874 BACH2Q9BYV9 841 aa23.38■■□□□ 1.33
TNIP1-221ENST00000610874 LAS1LQ9Y4W2 734 aaKnown RBP23.38■■□□□ 1.33
TNIP1-221ENST00000610874 PPLO60437 1756 aa23.38■■□□□ 1.33
TNIP1-221ENST00000610874 KIAA1210Q9ULL0 1709 aa23.37■■□□□ 1.33
TNIP1-221ENST00000610874 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
TNIP1-221ENST00000610874 KIF13AQ9H1H9 1805 aa23.37■■□□□ 1.33
TNIP1-221ENST00000610874 VGFO15240 615 aaPredicted RBP23.36■■□□□ 1.33
TNIP1-221ENST00000610874 SKAP1Q86WV1 359 aa23.36■■□□□ 1.33
TNIP1-221ENST00000610874 RPGRIP1LQ68CZ1 1315 aa23.36■■□□□ 1.33
TNIP1-221ENST00000610874 SLC52A1Q9NWF4 448 aa23.36■■□□□ 1.33
TNIP1-221ENST00000610874 STK26Q9P289 416 aa23.36■■□□□ 1.33
TNIP1-221ENST00000610874 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
TNIP1-221ENST00000610874 CENPJQ9HC77 1338 aaPredicted RBP23.36■■□□□ 1.33
TNIP1-221ENST00000610874 CRBNQ96SW2 442 aa23.34■■□□□ 1.33
TNIP1-221ENST00000610874 ERVK-7P63135 1459 aa23.33■■□□□ 1.33
TNIP1-221ENST00000610874 PIK3C2BO00750 1634 aa23.33■■□□□ 1.33
TNIP1-221ENST00000610874 MS4A1P11836 297 aa23.33■■□□□ 1.33
TNIP1-221ENST00000610874 ZC3H13Q5T200 1668 aaKnown RBP23.31■■□□□ 1.32
TNIP1-221ENST00000610874 AMER1Q5JTC6 1135 aaPredicted RBP23.31■■□□□ 1.32
TNIP1-221ENST00000610874 MYO5BQ9ULV0 1848 aa23.31■■□□□ 1.32
TNIP1-221ENST00000610874 NEXMIFQ5QGS0 1516 aa23.3■■□□□ 1.32
TNIP1-221ENST00000610874 PREX1Q8TCU6 1659 aa23.3■■□□□ 1.32
TNIP1-221ENST00000610874 NEFMP07197 916 aa23.29■■□□□ 1.32
TNIP1-221ENST00000610874 BLMP54132 1417 aaPredicted RBP23.29■■□□□ 1.32
TNIP1-221ENST00000610874 ADGRB1O14514 1584 aa23.28■■□□□ 1.32
TNIP1-221ENST00000610874 CARD14Q9BXL6 1004 aa23.28■■□□□ 1.32
TNIP1-221ENST00000610874 CLTCQ00610 1675 aaKnown RBP23.26■■□□□ 1.31
TNIP1-221ENST00000610874 SLC12A5Q9H2X9 1139 aa23.26■■□□□ 1.31
TNIP1-221ENST00000610874 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
TNIP1-221ENST00000610874 C20orf194Q5TEA3 1177 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms