RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 NGDNQ8NEJ9 315 aaKnown RBP11.21□□□□□ -0.62
COL25A1-208ENST00000610288 BCL2L13Q9BXK5 485 aa11.21□□□□□ -0.62
COL25A1-208ENST00000610288 LMOD3Q0VAK6 560 aa11.2□□□□□ -0.62
COL25A1-208ENST00000610288 PDIA4P13667 645 aaKnown RBP11.2□□□□□ -0.62
COL25A1-208ENST00000610288 MYOM3Q5VTT5 1437 aa11.2□□□□□ -0.62
COL25A1-208ENST00000610288 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
COL25A1-208ENST00000610288 CUX1P39880 1505 aa11.19□□□□□ -0.62
COL25A1-208ENST00000610288 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
COL25A1-208ENST00000610288 GNL2Q13823 731 aaKnown RBP11.19□□□□□ -0.62
COL25A1-208ENST00000610288 DZIP1LQ8IYY4 767 aaKnown RBP11.19□□□□□ -0.62
COL25A1-208ENST00000610288 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
COL25A1-208ENST00000610288 GPS2Q13227 327 aa11.19□□□□□ -0.62
COL25A1-208ENST00000610288 R3HCC1Q9Y3T6 440 aaKnown RBP11.19□□□□□ -0.62
COL25A1-208ENST00000610288 WDR97A6NE52 1622 aa11.19□□□□□ -0.62
COL25A1-208ENST00000610288 REC8O95072 547 aa11.19□□□□□ -0.62
COL25A1-208ENST00000610288 AMPHP49418 695 aa11.19□□□□□ -0.62
COL25A1-208ENST00000610288 PTPRGP23470 1445 aa11.18□□□□□ -0.62
COL25A1-208ENST00000610288 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
COL25A1-208ENST00000610288 CCDC173Q0VFZ6 552 aa11.18□□□□□ -0.62
COL25A1-208ENST00000610288 HDAC5Q9UQL6 1122 aa11.18□□□□□ -0.62
COL25A1-208ENST00000610288 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
COL25A1-208ENST00000610288 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
COL25A1-208ENST00000610288 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
COL25A1-208ENST00000610288 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
COL25A1-208ENST00000610288 NOL8Q76FK4 1167 aaKnown RBP11.17□□□□□ -0.62
COL25A1-208ENST00000610288 LTV1Q96GA3 475 aaPredicted RBP11.17□□□□□ -0.62
COL25A1-208ENST00000610288 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
COL25A1-208ENST00000610288 BBXQ8WY36 941 aaPredicted RBP11.16□□□□□ -0.62
COL25A1-208ENST00000610288 DIAPH3Q9NSV4 1193 aa11.16□□□□□ -0.62
COL25A1-208ENST00000610288 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
COL25A1-208ENST00000610288 IGF1RP08069 1367 aa11.16□□□□□ -0.62
COL25A1-208ENST00000610288 ELL2O00472 640 aaPredicted RBP11.16□□□□□ -0.62
COL25A1-208ENST00000610288 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
COL25A1-208ENST00000610288 ESPNB1AK53 854 aa11.16□□□□□ -0.62
COL25A1-208ENST00000610288 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
COL25A1-208ENST00000610288 GPATCH3Q96I76 525 aa11.16□□□□□ -0.62
COL25A1-208ENST00000610288 TSPYL1Q9H0U9 437 aa11.16□□□□□ -0.62
COL25A1-208ENST00000610288 CHMP3Q9Y3E7 222 aa11.16□□□□□ -0.62
COL25A1-208ENST00000610288 VGFO15240 615 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-208ENST00000610288 PDE3AQ14432 1141 aa11.15□□□□□ -0.62
COL25A1-208ENST00000610288 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
COL25A1-208ENST00000610288 CWC15Q9P013 229 aaKnown RBP11.15□□□□□ -0.63
COL25A1-208ENST00000610288 CCDC184Q52MB2 194 aa11.14□□□□□ -0.63
COL25A1-208ENST00000610288 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
COL25A1-208ENST00000610288 GRPEL1Q9HAV7 217 aa11.14□□□□□ -0.63
COL25A1-208ENST00000610288 GOLGA6L19H0YKK7 550 aa11.14□□□□□ -0.63
COL25A1-208ENST00000610288 RBM10P98175 930 aaKnown RBP11.14□□□□□ -0.63
COL25A1-208ENST00000610288 KIF3AQ9Y496 699 aa11.14□□□□□ -0.63
COL25A1-208ENST00000610288 EVC2Q86UK5 1308 aa11.14□□□□□ -0.63
COL25A1-208ENST00000610288 PANK1Q8TE04 598 aa11.13□□□□□ -0.63
COL25A1-208ENST00000610288 MCM4P33991 863 aa11.13□□□□□ -0.63
COL25A1-208ENST00000610288 RUNDC1Q96C34 613 aa11.13□□□□□ -0.63
COL25A1-208ENST00000610288 ADAMTS8Q9UP79 889 aa11.13□□□□□ -0.63
COL25A1-208ENST00000610288 MBD3O95983 291 aa11.12□□□□□ -0.63
COL25A1-208ENST00000610288 CCDC34Q96HJ3 373 aa11.12□□□□□ -0.63
COL25A1-208ENST00000610288 NINLQ9Y2I6 1382 aa11.11□□□□□ -0.63
COL25A1-208ENST00000610288 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
COL25A1-208ENST00000610288 BECN2A8MW95 431 aa11.11□□□□□ -0.63
COL25A1-208ENST00000610288 INTS3Q68E01 1043 aaKnown RBP11.11□□□□□ -0.63
COL25A1-208ENST00000610288 COG3Q96JB2 828 aa11.11□□□□□ -0.63
COL25A1-208ENST00000610288 TPM3P06753 285 aa11.11□□□□□ -0.63
COL25A1-208ENST00000610288 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
COL25A1-208ENST00000610288 FGD5Q6ZNL6 1462 aa11.11□□□□□ -0.63
COL25A1-208ENST00000610288 ZNF644Q9H582 1327 aaPredicted RBP11.11□□□□□ -0.63
COL25A1-208ENST00000610288 HFM1A2PYH4 1435 aa11.11□□□□□ -0.63
COL25A1-208ENST00000610288 LNPKQ9C0E8 428 aa11.11□□□□□ -0.63
COL25A1-208ENST00000610288 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
COL25A1-208ENST00000610288 API5Q9BZZ5 524 aaKnown RBP11.1□□□□□ -0.63
COL25A1-208ENST00000610288 HSP90B1P14625 803 aaKnown RBP11.1□□□□□ -0.63
COL25A1-208ENST00000610288 PDZRN3Q9UPQ7 1066 aa11.1□□□□□ -0.63
COL25A1-208ENST00000610288 FYCO1Q9BQS8 1478 aa11.1□□□□□ -0.63
COL25A1-208ENST00000610288 GAPVD1Q14C86 1478 aa11.09□□□□□ -0.63
COL25A1-208ENST00000610288 C11orf95C9JLR9 678 aaPredicted RBP11.09□□□□□ -0.63
COL25A1-208ENST00000610288 CDC45O75419 566 aa11.09□□□□□ -0.63
COL25A1-208ENST00000610288 STAC3Q96MF2 364 aa11.09□□□□□ -0.63
COL25A1-208ENST00000610288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL25A1-208ENST00000610288 FOXD4L6Q3SYB3 417 aaPredicted RBP11.09□□□□□ -0.63
COL25A1-208ENST00000610288 FOXD4L3Q6VB84 417 aaPredicted RBP11.09□□□□□ -0.63
COL25A1-208ENST00000610288 CAVIN1Q6NZI2 390 aaKnown RBP11.09□□□□□ -0.63
COL25A1-208ENST00000610288 NCOA2Q15596 1464 aa11.08□□□□□ -0.64
COL25A1-208ENST00000610288 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
COL25A1-208ENST00000610288 RILPL2Q969X0 211 aa11.08□□□□□ -0.64
COL25A1-208ENST00000610288 ROCK1Q13464 1354 aa11.08□□□□□ -0.64
COL25A1-208ENST00000610288 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
COL25A1-208ENST00000610288 CHMP4CQ96CF2 233 aa11.08□□□□□ -0.64
COL25A1-208ENST00000610288 NBPF8Q3BBV2 869 aa11.07□□□□□ -0.64
COL25A1-208ENST00000610288 ZSCAN30Q86W11 494 aa11.07□□□□□ -0.64
COL25A1-208ENST00000610288 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
COL25A1-208ENST00000610288 RABEP1Q15276 862 aa11.06□□□□□ -0.64
COL25A1-208ENST00000610288 SF3A1Q15459 793 aaKnown RBP11.06□□□□□ -0.64
COL25A1-208ENST00000610288 PRXQ9BXM0 1461 aa11.06□□□□□ -0.64
COL25A1-208ENST00000610288 RNF214Q8ND24 703 aa11.06□□□□□ -0.64
COL25A1-208ENST00000610288 UQCRHLA0A096LP55 91 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 CLSTN1O94985 981 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 LETM1O95202 739 aaPredicted RBP11.05□□□□□ -0.64
COL25A1-208ENST00000610288 UQCRHP07919 91 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 ARGLU1Q9NWB6 273 aaPredicted RBP11.05□□□□□ -0.64
COL25A1-208ENST00000610288 H3BQV1 296 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 PPP2R1AP30153 589 aa11.05□□□□□ -0.64
COL25A1-208ENST00000610288 IFFO2Q5TF58 517 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms