RNA–Protein interactions for RNA: ENST00000609969.1

AC063944.3-201, humanhuman

BASIC

Gene AC063944.3, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC063944.3-201ENST00000609969 TULP1O00294 542 aaPredicted RBP13.4□□□□□ -0.26
AC063944.3-201ENST00000609969 APLP1P51693 650 aa13.4□□□□□ -0.26
AC063944.3-201ENST00000609969 METTL3Q86U44 580 aaKnown RBP13.4□□□□□ -0.26
AC063944.3-201ENST00000609969 TJAP1Q5JTD0 557 aa13.39□□□□□ -0.27
AC063944.3-201ENST00000609969 MTRQ99707 1265 aa13.35□□□□□ -0.27
AC063944.3-201ENST00000609969 RGS20O76081 388 aa13.34□□□□□ -0.27
AC063944.3-201ENST00000609969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
AC063944.3-201ENST00000609969 PRR14Q9BWN1 585 aa13.33□□□□□ -0.28
AC063944.3-201ENST00000609969 IL21Q9HBE4 155 aa13.33□□□□□ -0.28
AC063944.3-201ENST00000609969 SLC10A3P09131 477 aa13.3□□□□□ -0.28
AC063944.3-201ENST00000609969 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
AC063944.3-201ENST00000609969 MAP2K5Q13163 448 aa13.27□□□□□ -0.29
AC063944.3-201ENST00000609969 ZNF516Q92618 1163 aa13.27□□□□□ -0.29
AC063944.3-201ENST00000609969 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.29
AC063944.3-201ENST00000609969 ACTN4O43707 911 aaKnown RBP13.26□□□□□ -0.29
AC063944.3-201ENST00000609969 KMT5BQ4FZB7 885 aa13.25□□□□□ -0.29
AC063944.3-201ENST00000609969 CFHP08603 1231 aa13.24□□□□□ -0.29
AC063944.3-201ENST00000609969 COPS2P61201 443 aa13.24□□□□□ -0.29
AC063944.3-201ENST00000609969 PCDHB3Q9Y5E6 796 aa13.24□□□□□ -0.29
AC063944.3-201ENST00000609969 IRF6O14896 467 aa13.23□□□□□ -0.29
AC063944.3-201ENST00000609969 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
AC063944.3-201ENST00000609969 MINK1Q8N4C8 1332 aaPredicted RBP13.22□□□□□ -0.29
AC063944.3-201ENST00000609969 RSPH4AQ5TD94 716 aa13.22□□□□□ -0.29
AC063944.3-201ENST00000609969 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
AC063944.3-201ENST00000609969 ZPR1O75312 459 aa13.2□□□□□ -0.3
AC063944.3-201ENST00000609969 BLOC1S3Q6QNY0 202 aa13.2□□□□□ -0.3
AC063944.3-201ENST00000609969 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
AC063944.3-201ENST00000609969 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
AC063944.3-201ENST00000609969 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
AC063944.3-201ENST00000609969 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
AC063944.3-201ENST00000609969 RDH13Q8NBN7 331 aa13.14□□□□□ -0.31
AC063944.3-201ENST00000609969 CCDC102AQ96A19 550 aa13.14□□□□□ -0.31
AC063944.3-201ENST00000609969 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
AC063944.3-201ENST00000609969 ZMYND10O75800 440 aa13.11□□□□□ -0.31
AC063944.3-201ENST00000609969 GCGRP47871 477 aa13.11□□□□□ -0.31
AC063944.3-201ENST00000609969 NR1I2O75469 434 aa13.1□□□□□ -0.31
AC063944.3-201ENST00000609969 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
AC063944.3-201ENST00000609969 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
AC063944.3-201ENST00000609969 TMUB1Q9BVT8 246 aa13.09□□□□□ -0.31
AC063944.3-201ENST00000609969 GGCXP38435 758 aa13.08□□□□□ -0.32
AC063944.3-201ENST00000609969 PUS10Q3MIT2 529 aaKnown RBP13.08□□□□□ -0.32
AC063944.3-201ENST00000609969 SCUBE3Q8IX30 993 aa13.08□□□□□ -0.32
AC063944.3-201ENST00000609969 TLL1O43897 1013 aa13.07□□□□□ -0.32
AC063944.3-201ENST00000609969 CD46P15529 392 aa13.07□□□□□ -0.32
AC063944.3-201ENST00000609969 MDM2Q00987 491 aaPredicted RBP13.07□□□□□ -0.32
AC063944.3-201ENST00000609969 FUT2Q10981 343 aa13.06□□□□□ -0.32
AC063944.3-201ENST00000609969 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
AC063944.3-201ENST00000609969 MORN1Q5T089 497 aa13.05□□□□□ -0.32
AC063944.3-201ENST00000609969 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
AC063944.3-201ENST00000609969 ADH1BP00325 375 aa13.03□□□□□ -0.32
AC063944.3-201ENST00000609969 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
AC063944.3-201ENST00000609969 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
AC063944.3-201ENST00000609969 CLCN1P35523 988 aa13.02□□□□□ -0.33
AC063944.3-201ENST00000609969 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.33
AC063944.3-201ENST00000609969 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
AC063944.3-201ENST00000609969 RNF223E7ERA6 249 aa13□□□□□ -0.33
AC063944.3-201ENST00000609969 S1PR4O95977 384 aa12.99□□□□□ -0.33
AC063944.3-201ENST00000609969 THAP11Q96EK4 314 aa12.99□□□□□ -0.33
AC063944.3-201ENST00000609969 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
AC063944.3-201ENST00000609969 SPSB2Q99619 263 aa12.98□□□□□ -0.33
AC063944.3-201ENST00000609969 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
AC063944.3-201ENST00000609969 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
AC063944.3-201ENST00000609969 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
AC063944.3-201ENST00000609969 ANKLE1Q8NAG6 615 aa12.96□□□□□ -0.33
AC063944.3-201ENST00000609969 REPIN1Q9BWE0 567 aaKnown RBP12.96□□□□□ -0.33
AC063944.3-201ENST00000609969 SLC6A16Q9GZN6 736 aa12.96□□□□□ -0.33
AC063944.3-201ENST00000609969 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
AC063944.3-201ENST00000609969 KDM4AO75164 1064 aa12.95□□□□□ -0.34
AC063944.3-201ENST00000609969 AMHR2Q16671 573 aa12.95□□□□□ -0.34
AC063944.3-201ENST00000609969 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
AC063944.3-201ENST00000609969 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
AC063944.3-201ENST00000609969 USP46P62068 366 aa12.92□□□□□ -0.34
AC063944.3-201ENST00000609969 BRICD5Q6PL45 260 aa12.92□□□□□ -0.34
AC063944.3-201ENST00000609969 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
AC063944.3-201ENST00000609969 FAM160A2Q8N612 972 aaPredicted RBP12.9□□□□□ -0.34
AC063944.3-201ENST00000609969 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
AC063944.3-201ENST00000609969 RNF19BQ6ZMZ0 732 aa12.89□□□□□ -0.35
AC063944.3-201ENST00000609969 SLC19A1P41440 591 aa12.88□□□□□ -0.35
AC063944.3-201ENST00000609969 AK7Q96M32 723 aa12.88□□□□□ -0.35
AC063944.3-201ENST00000609969 TRIM66O15016 1216 aa12.87□□□□□ -0.35
AC063944.3-201ENST00000609969 HOXA2O43364 376 aa12.87□□□□□ -0.35
AC063944.3-201ENST00000609969 Q3C1V9 767 aa12.87□□□□□ -0.35
AC063944.3-201ENST00000609969 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
AC063944.3-201ENST00000609969 LAPTM4AQ15012 233 aa12.86□□□□□ -0.35
AC063944.3-201ENST00000609969 MSS51Q4VC12 460 aa12.86□□□□□ -0.35
AC063944.3-201ENST00000609969 PLA2G2CQ5R387 149 aa12.85□□□□□ -0.35
AC063944.3-201ENST00000609969 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
AC063944.3-201ENST00000609969 LIAT1Q6ZQX7 453 aa12.85□□□□□ -0.35
AC063944.3-201ENST00000609969 HLA-CQ95604 372 aa12.85□□□□□ -0.35
AC063944.3-201ENST00000609969 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
AC063944.3-201ENST00000609969 GFRA3O60609 400 aa12.83□□□□□ -0.36
AC063944.3-201ENST00000609969 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
AC063944.3-201ENST00000609969 BCANQ96GW7 911 aa12.83□□□□□ -0.36
AC063944.3-201ENST00000609969 PARP9Q8IXQ6 854 aa12.82□□□□□ -0.36
AC063944.3-201ENST00000609969 ZNF598Q86UK7 904 aaKnown RBP12.81□□□□□ -0.36
AC063944.3-201ENST00000609969 PRDM9Q9NQV7 894 aa12.81□□□□□ -0.36
AC063944.3-201ENST00000609969 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
AC063944.3-201ENST00000609969 NRG2O14511 850 aaPredicted RBP12.79□□□□□ -0.36
AC063944.3-201ENST00000609969 GUCA2AQ02747 115 aa12.79□□□□□ -0.36
AC063944.3-201ENST00000609969 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms