RNA–Protein interactions for RNA: ENST00000609933.3

LINC02028-218, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-218ENST00000609933 SHPRHQ149N8 1683 aa17.73■□□□□ 0.43
LINC02028-218ENST00000609933 KANK1Q14678 1352 aa17.72■□□□□ 0.43
LINC02028-218ENST00000609933 AHDC1Q5TGY3 1603 aaPredicted RBP17.7■□□□□ 0.42
LINC02028-218ENST00000609933 AFF2P51816 1311 aa17.7■□□□□ 0.42
LINC02028-218ENST00000609933 SRCAPQ6ZRS2 3230 aa17.7■□□□□ 0.42
LINC02028-218ENST00000609933 KIF15Q9NS87 1388 aa17.69■□□□□ 0.42
LINC02028-218ENST00000609933 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
LINC02028-218ENST00000609933 ADGRB3O60242 1522 aa17.68■□□□□ 0.42
LINC02028-218ENST00000609933 ATF3P18847 181 aa17.68■□□□□ 0.42
LINC02028-218ENST00000609933 NUTM2DQ5VT03 806 aaPredicted RBP17.68■□□□□ 0.42
LINC02028-218ENST00000609933 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
LINC02028-218ENST00000609933 NCOA3Q9Y6Q9 1424 aa17.67■□□□□ 0.42
LINC02028-218ENST00000609933 PPP1R15AO75807 674 aaPredicted RBP17.67■□□□□ 0.42
LINC02028-218ENST00000609933 FOXD1Q16676 465 aa17.67■□□□□ 0.42
LINC02028-218ENST00000609933 RRP7BPQ9NSQ0 103 aa17.66■□□□□ 0.42
LINC02028-218ENST00000609933 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
LINC02028-218ENST00000609933 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
LINC02028-218ENST00000609933 RGS12O14924 1447 aa17.64■□□□□ 0.42
LINC02028-218ENST00000609933 PLEKHG1Q9ULL1 1385 aa17.64■□□□□ 0.41
LINC02028-218ENST00000609933 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
LINC02028-218ENST00000609933 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
LINC02028-218ENST00000609933 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
LINC02028-218ENST00000609933 QTRT2Q9H974 415 aaKnown RBP17.63■□□□□ 0.41
LINC02028-218ENST00000609933 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
LINC02028-218ENST00000609933 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
LINC02028-218ENST00000609933 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.62■□□□□ 0.41
LINC02028-218ENST00000609933 C8orf37Q96NL8 207 aa17.62■□□□□ 0.41
LINC02028-218ENST00000609933 LMTK2Q8IWU2 1503 aa17.62■□□□□ 0.41
LINC02028-218ENST00000609933 DIP2AQ14689 1571 aa17.61■□□□□ 0.41
LINC02028-218ENST00000609933 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
LINC02028-218ENST00000609933 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
LINC02028-218ENST00000609933 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
LINC02028-218ENST00000609933 NOS1P29475 1434 aa17.6■□□□□ 0.41
LINC02028-218ENST00000609933 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
LINC02028-218ENST00000609933 RIMS2Q9UQ26 1411 aa17.59■□□□□ 0.41
LINC02028-218ENST00000609933 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
LINC02028-218ENST00000609933 CROCC2H7BZ55 1655 aa17.56■□□□□ 0.4
LINC02028-218ENST00000609933 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
LINC02028-218ENST00000609933 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
LINC02028-218ENST00000609933 ABCC5O15440 1437 aa17.55■□□□□ 0.4
LINC02028-218ENST00000609933 ASXL1Q8IXJ9 1541 aa17.54■□□□□ 0.4
LINC02028-218ENST00000609933 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC02028-218ENST00000609933 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
LINC02028-218ENST00000609933 GCC2Q8IWJ2 1684 aa17.52■□□□□ 0.4
LINC02028-218ENST00000609933 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.4
LINC02028-218ENST00000609933 CHGAP10645 457 aaKnown RBP17.51■□□□□ 0.39
LINC02028-218ENST00000609933 SETBP1Q9Y6X0 1596 aa17.51■□□□□ 0.39
LINC02028-218ENST00000609933 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
LINC02028-218ENST00000609933 DCCP43146 1447 aa17.5■□□□□ 0.39
LINC02028-218ENST00000609933 ADAMTS13Q76LX8 1427 aa17.5■□□□□ 0.39
LINC02028-218ENST00000609933 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
LINC02028-218ENST00000609933 DAPK1P53355 1430 aa17.49■□□□□ 0.39
LINC02028-218ENST00000609933 ADAMTS2O95450 1211 aa17.49■□□□□ 0.39
LINC02028-218ENST00000609933 KANK4Q5T7N3 995 aaPredicted RBP17.49■□□□□ 0.39
LINC02028-218ENST00000609933 CHIC2Q9UKJ5 165 aa17.49■□□□□ 0.39
LINC02028-218ENST00000609933 AMOTL2Q9Y2J4 779 aa17.49■□□□□ 0.39
LINC02028-218ENST00000609933 TMEM131LA2VDJ0 1609 aa17.49■□□□□ 0.39
LINC02028-218ENST00000609933 NHSL1Q5SYE7 1610 aa17.49■□□□□ 0.39
LINC02028-218ENST00000609933 PNPLA6Q8IY17 1366 aa17.49■□□□□ 0.39
LINC02028-218ENST00000609933 TRPM2O94759 1503 aa17.48■□□□□ 0.39
LINC02028-218ENST00000609933 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
LINC02028-218ENST00000609933 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
LINC02028-218ENST00000609933 USP21Q9UK80 565 aa17.46■□□□□ 0.39
LINC02028-218ENST00000609933 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
LINC02028-218ENST00000609933 MST1RQ04912 1400 aa17.46■□□□□ 0.39
LINC02028-218ENST00000609933 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
LINC02028-218ENST00000609933 VPS8Q8N3P4 1428 aa17.44■□□□□ 0.38
LINC02028-218ENST00000609933 PTPRUQ92729 1446 aa17.43■□□□□ 0.38
LINC02028-218ENST00000609933 EP400Q96L91 3159 aa17.38■□□□□ 0.37
LINC02028-218ENST00000609933 ATRNO75882 1429 aa17.38■□□□□ 0.37
LINC02028-218ENST00000609933 UNC13BO14795 1591 aa17.37■□□□□ 0.37
LINC02028-218ENST00000609933 XRN1Q8IZH2 1706 aaKnown RBP17.37■□□□□ 0.37
LINC02028-218ENST00000609933 FNBP4Q8N3X1 1017 aaPredicted RBP17.36■□□□□ 0.37
LINC02028-218ENST00000609933 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
LINC02028-218ENST00000609933 ADGRL3Q9HAR2 1447 aa17.35■□□□□ 0.37
LINC02028-218ENST00000609933 ANKRD50Q9ULJ7 1429 aa17.34■□□□□ 0.37
LINC02028-218ENST00000609933 ADGRL2O95490 1459 aa17.32■□□□□ 0.36
LINC02028-218ENST00000609933 C1orf167Q5SNV9 1468 aa17.31■□□□□ 0.36
LINC02028-218ENST00000609933 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
LINC02028-218ENST00000609933 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
LINC02028-218ENST00000609933 SOS2Q07890 1332 aaPredicted RBP17.3■□□□□ 0.36
LINC02028-218ENST00000609933 LRP5O75197 1615 aa17.3■□□□□ 0.36
LINC02028-218ENST00000609933 APLP2Q06481 763 aa17.3■□□□□ 0.36
LINC02028-218ENST00000609933 NALCNQ8IZF0 1738 aa17.3■□□□□ 0.36
LINC02028-218ENST00000609933 METP08581 1390 aa17.29■□□□□ 0.36
LINC02028-218ENST00000609933 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
LINC02028-218ENST00000609933 E9PCH4 1651 aa17.29■□□□□ 0.36
LINC02028-218ENST00000609933 LAMC1P11047 1609 aa17.29■□□□□ 0.36
LINC02028-218ENST00000609933 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
LINC02028-218ENST00000609933 BCL9LQ86UU0 1499 aa17.27■□□□□ 0.36
LINC02028-218ENST00000609933 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
LINC02028-218ENST00000609933 DEFB132Q7Z7B7 95 aa17.27■□□□□ 0.36
LINC02028-218ENST00000609933 ORAI2Q96SN7 254 aa17.27■□□□□ 0.36
LINC02028-218ENST00000609933 COL22A1Q8NFW1 1626 aaPredicted RBP17.26■□□□□ 0.35
LINC02028-218ENST00000609933 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
LINC02028-218ENST00000609933 IQGAP3Q86VI3 1631 aa17.23■□□□□ 0.35
LINC02028-218ENST00000609933 MYOM2P54296 1465 aa17.23■□□□□ 0.35
LINC02028-218ENST00000609933 MARF1Q9Y4F3 1742 aaKnown RBP17.21■□□□□ 0.35
LINC02028-218ENST00000609933 RALGAPBQ86X10 1494 aa17.2■□□□□ 0.34
LINC02028-218ENST00000609933 PSDA5PKW4 1024 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms